Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00892 ATGGCGGGAATCGAAGAAAATGTTGCTTTGAGTGGAGACTGGTTGGCTCCCAGTCCGGGCCCAAGAACATTCTTCTCTGCAATGCTTGGTGAAGATTTAGGCTCAAGGTCTGCAATGGAGTCTGGTAGGAATAATCAAGAGCCACTCTTTTTAAGACCTCACGAGGAGAGGTTTATGGAAAGCTCTGAGGCTATGGAGGGGACTCCACCTTCTTCTACCTTGTTATCTTCATTTTTGGAGCAGAAATCGAATTTACGATCCGGTCTTGGCGAAAGAATAGCAGCCAGAGCTGGATTCAATGCTCCAAGACTAAACACAGATATTATTAGAACTTCTGATCTTTCGCCGGATTCTGATATCAAGTCTCCGTTCTGGACGATGCCGCCTGGTCTCAGTCCGACTACTCTGCTTGATTCTCCAGTTTTTCTTTCCAATTCACTGGTTCAGCCATCTCCGACCACAGGAAAACTGCCTTTTTTTCCAAACGATAACATTATGAGCTCCTCGTTAATGGTGGAGGCGAGTAATAGAAGTAAAGATCATCTCTTTAGCAGTATCAATGCACCCCCATTTGCGTTAAAGCCCGGAGATGATATGAGACCGCCTTTTGTTCTTGGTGCAATGGCGCCGACCACTCATCCGCAGTCATCTTTTCCGGCGGATGCTTCGGTGCAATCCGAGAGTTCTCTTAAATCTCACAGTGTGGAACTGTCTAAACCTCCATTGAAGGGTCATGGAGATTTTTCGCCGGATCAAAGATTCTTTGATTCTATTGATGAAGGCAACAAACATTCTCCGCTGCTCGGTGAGCATCAAGACGAAGAACAAAGAGCCACCGGAGAATCGATGGTTCCGAATAATTGCGGGGCCCCATCGGACGACGGATATAACTGGAGAAAATACGGACAGAAACAGGTAAAAGGAAGTGAGTATCCGAGAAGTTATTATAAATGCACTCATCCAAACTGTCAGGTTAAGAAGAAGGTCGAACGCTCCTATGAGGGCCACATAACGGAGATCATCTATAAGGGTGCGCATAACCATCCGAAGCCTTCGCCAAATCGGTGTAATCTGATGCAAAAAGACATGAACGAACAGCCACAGAGCTGCGAAGCTGATCTGCTCTTGGCAGGCCTGCGGAAAGGGACTTTGGCCGGAGCTTCTGATTGGAGGAATGACAACCCCGAGGTGACATCGTCGGCTTCGGTGGGTCCTGAATATGTCAATCAACCCACCTCTTTACAGCCTCAGAACGGCTGCCATTTTGAGCAAGGCGATGCAGTTGATGCTTCCTCTACGTTTTCCAATGACGAAGATGAAGAAGATCGAGGTACTCATGGTAGTGTGTCGATAGGCCATGATGGTGAAGGAGACGAATCTGAATCGAAGAGAAGGAAAATTGAAGTTTATGCAAGTGAAATGAGTGGAGCTTCACGTGCCATCCGAGAGCCTCGAGTCGTCGTCCAGACAACCAGTGAAGTAGACATTCTCGATGATGGATATCGTTGGCGCAAATACGGACAGAAAGTCGTCAAAGGAAATCCAAATCCTAGGAGTTACTACAAGTGCACGGCCGCCGGCTGCACGGTGAGGAAACACGTCGAGAGAGCTTCTCATGACCTTAAATCAGTAATAACAACCTACGAAGGAAAGCATAATCATGACGTTCCGGCTGCTCGTAACAGCAGCCATATGAACGCCCCAACTTCCGGTTCGGTGGCAGCTCAAGCTCCGTCGATGGCAATTCAAAGCCACGGTCACCGGCCAGAGCCATCTCAAGCTCACACCGGAATGGTAAGGTACGACGGACCGCCTCAACTTGGTCCGTTTGGTCCGGTCGGAAGGCAGCCTGTAGGCCCCCCACCCCCTGCCCATGGTTTCAGTTATGGAATGAGCCACCCTCCAACCTTGCCCAACCTTGCTTTCCCTGTGGTGGGACCCCCCGGCCGAGTCAAGCTTCCGGTTCAACCGTTTCATCCTTACATGGCTCAGCATCAGCAATGGGAGGAAATGGGGTTTGGGATGCCGAAAGGAGAAATGAAGGTGGAGCCGATGTCGGAGGCTGTGTATCAGCAGATAATGAGTAGGCTTCCGCTTGGACCTCATGTGTAA 2112 49.34 MAGIEENVALSGDWLAPSPGPRTFFSAMLGEDLGSRSAMESGRNNQEPLFLRPHEERFMESSEAMEGTPPSSTLLSSFLEQKSNLRSGLGERIAARAGFNAPRLNTDIIRTSDLSPDSDIKSPFWTMPPGLSPTTLLDSPVFLSNSLVQPSPTTGKLPFFPNDNIMSSSLMVEASNRSKDHLFSSINAPPFALKPGDDMRPPFVLGAMAPTTHPQSSFPADASVQSESSLKSHSVELSKPPLKGHGDFSPDQRFFDSIDEGNKHSPLLGEHQDEEQRATGESMVPNNCGAPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSYEGHITEIIYKGAHNHPKPSPNRCNLMQKDMNEQPQSCEADLLLAGLRKGTLAGASDWRNDNPEVTSSASVGPEYVNQPTSLQPQNGCHFEQGDAVDASSTFSNDEDEEDRGTHGSVSIGHDGEGDESESKRRKIEVYASEMSGASRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHMNAPTSGSVAAQAPSMAIQSHGHRPEPSQAHTGMVRYDGPPQLGPFGPVGRQPVGPPPPAHGFSYGMSHPPTLPNLAFPVVGPPGRVKLPVQPFHPYMAQHQQWEEMGFGMPKGEMKVEPMSEAVYQQIMSRLPLGPHV 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27901421 27904222 - BLOR02682 Blo10g00892 66088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00892 703 Gene3D WRKY domain 282 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 ProSiteProfiles WRKY domain profile. 293 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 SUPERFAMILY WRKY DNA-binding domain 291 351 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 Pfam WRKY DNA -binding domain 293 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 Pfam WRKY DNA -binding domain 498 554 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 100 639 - -
Blo10g00892 703 SMART WRKY_cls 497 556 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 SMART WRKY_cls 292 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 Gene3D WRKY domain 484 550 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 MobiDBLite consensus disorder prediction 205 296 - -
Blo10g00892 703 MobiDBLite consensus disorder prediction 392 420 - -
Blo10g00892 703 MobiDBLite consensus disorder prediction 210 235 - -
Blo10g00892 703 MobiDBLite consensus disorder prediction 249 278 - -
Blo10g00892 703 MobiDBLite consensus disorder prediction 385 464 - -
Blo10g00892 703 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 100 639 IPR044810 GO:0003700
Blo10g00892 703 ProSiteProfiles WRKY domain profile. 492 557 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 SUPERFAMILY WRKY DNA-binding domain 489 557 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo10g00892 703 MobiDBLite consensus disorder prediction 437 464 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00873 Blo-Chr7:27396932 Blo10g00892 Blo-Chr10:27901421 2.22E-92 dispersed
Blo07g01412 Blo-Chr7:34148772 Blo10g00892 Blo-Chr10:27901421 4.50E-11 dispersed
Blo10g00861 Blo-Chr10:27159181 Blo10g00892 Blo-Chr10:27901421 1.64E-92 dispersed
Blo10g00892 Blo-Chr10:27901421 Blo13g01025 Blo-Chr13:32591734 3.30E-97 dispersed
Blo07g00853 Blo-Chr7:26929234 Blo10g00892 Blo-Chr10:27901421 1.74E-15 transposed
Blo18g00508 Blo-Chr18:6426052 Blo10g00892 Blo-Chr10:27901421 1.19E-112 transposed
Blo10g00892 Blo-Chr10:27901421 Blo07g00852 Blo-Chr7:26927891 2.63E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12858 PF03106 WRKY 3.90E-24 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00892 K18835 - qsu:111999931 848.195