Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00896 ATGGGTCCGTTTGGTTCTCGCAATCACCGTCATCGTCTTCAACACGAAGAAGAAGACGCCATTTCAGATCTGCATTACCAAGCATCCAGGAGGCTGGCAGCGTCGTCGCCGAACGCCACCCACATCCACCACCTGCTCCTCCGATGCGCGCAGCTTATCACTCAAGCTGACTTCTCAGCCGCTCACCGTCTCATCTCCATTTTATCCTCCTACGCCTCCCCCTGCGGCGACTCCACCGAGAGGCTGGTCCACCAGCTCTCCAAAGCCCTTTCTCAACGCCTTGCTGCCTCATCTCCCACAGTGGGCGCTGCCGCCTCTGCTTCGATGCTGATGCTGATGACAATGGACGACGTTGTCCCTTCTACCAATTTCGGCGATGAAAATGCTTACCCGGTTGAGTTTTCGCCCTCATTTTCCGACGAGGCAATTCAGTCCTGCTACCTATCGCTAAATCAAATTACTCCGTTCATTAGATTCAGCCATTTAACAGCAAACCAAGCGATTTTAGAAGCAATTGGGGAAGAACAAAGAGCAATCCACATTCTGGATTTTGAAATAATGCATGGAGTTCAATGGCCGCCTCTCATGCAAGCCTTAGTCGAGCGTTCTAAATTCTACCCACCGCCGATGTTAAGAATCACGGGCACCGGCCGCGACCTCAACTTCCTCTGCAAAACCGGCGATCGTCTCTCCACTTTCGCTCAATCTCTTGGTCTCCAGTTTCAGTTTCAACCGCTTCTCATTCTCAACGATCACGACCACAATCTTCTCATTCCTTCAGCTCTCACACTAAACCCTAACGAAGCTTTAGCCGTCAACTGTGTTTTCTATCTTCACCGGCTTTACAAAGAAGACCTCTCCCTCTTCCTCCATAAAATCAAGTCTCTGAAACCAAAAGTATTCACCATTGCTGAAAGAGAAGCAAATCATAACCACCCCCTTTTTCTACAGAGATTTGTAGAGACTTTGGATCACTACTCCGCCATTTTCGATTCCTTAGAAGCGACACTACCGCCGAGCAGCAGCGAGAGGCTGGCAGTGGAGCAGATGTGGTTTGGGAGAGAGATAATGGACGTGGTGGCGAACGAAGAGACTAACAGAAGGCAAATCAGCCATCAAAGGTATGAATCATGGGAGTTGGTACTTCGAAGCTCAAGCTTTTCTAATCTTCCATTGAGCCCTTTTGCACTTTCTCAGGCTAAATTACTCCTCAGACTCCATTATCCTTCTGAGGGTTATCACCTTCATGTTCACAAAGATTCCTTCTTCCTGGGTTGGCAAAATCGGCCTCTTTTCTCTGTGTCCTCATGGCACTGA 1317 49.13 MGPFGSRNHRHRLQHEEEDAISDLHYQASRRLAASSPNATHIHHLLLRCAQLITQADFSAAHRLISILSSYASPCGDSTERLVHQLSKALSQRLAASSPTVGAAASASMLMLMTMDDVVPSTNFGDENAYPVEFSPSFSDEAIQSCYLSLNQITPFIRFSHLTANQAILEAIGEEQRAIHILDFEIMHGVQWPPLMQALVERSKFYPPPMLRITGTGRDLNFLCKTGDRLSTFAQSLGLQFQFQPLLILNDHDHNLLIPSALTLNPNEALAVNCVFYLHRLYKEDLSLFLHKIKSLKPKVFTIAEREANHNHPLFLQRFVETLDHYSAIFDSLEATLPPSSSERLAVEQMWFGREIMDVVANEETNRRQISHQRYESWELVLRSSSFSNLPLSPFALSQAKLLLRLHYPSEGYHLHVHKDSFFLGWQNRPLFSVSSWH 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27940535 27941851 - BLOR02686 Blo10g00896 66092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00896 438 ProSiteProfiles GRAS family profile. 33 438 IPR005202 -
Blo10g00896 438 PANTHER SCARECROW-LIKE PROTEIN 18 13 438 IPR030017 GO:0005634|GO:0010223
Blo10g00896 438 Pfam GRAS domain family 43 437 IPR005202 -
Blo10g00896 438 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 438 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00896 Blo-Chr10:27940535 Blo01g00753 Blo-Chr1:10017385 2.19E-57 dispersed
Blo18g00188 Blo-Chr18:1809599 Blo10g00896 Blo-Chr10:27940535 8.09E-50 dispersed
Blo10g00896 Blo-Chr10:27940535 Blo18g00464 Blo-Chr18:5297705 1.68E-61 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12859 PF03514 GRAS 8.50E-116 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00896 - - jre:108992395 527.324