Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00907 ATGACCGATCTGAGCCAACTGGAGGTCCGAGCGAGCGAGGCTAGGGTGGTGCACTGGATGCAGCGTTGCTTACACGATATAACCGGGAGCGATCTCGGAACGTTGAGATTGTTGACGTTTTTGAGACCTAAATGGATCACCATTGTTGAACAGGACCTCACCCATGGCGATAGCTTTCCGGGGAGGTTCGTGGAGGCGCTGCATTATTACAGCGCGTTGTTCGACGCTCTCGGAGATAGTTTGGCGGCGGACAGTGTAGAGAGGCATATGGTGGAGCTGGAGCAGCAACTGTTCGGGTCTGAGATTAGGAACATCGTGGCGGTGGGTGGACCGGTGAGGAATGGTGGAAAGGTCGGGAGCGAGCTCAGAAAAAACCCACCTGCTCAGGCTAGTTTGTTGCTGGGGATGTTTCCTAGGAAAGGGTGTACTTTGGTTGAGGAAAACGGTTGCTTGAAGTTAGGTGGGAAGGATCTCTCTCTGCTAACAGCTTCAGCTCAGCCGTCCGACTGA 510 53.92 MTDLSQLEVRASEARVVHWMQRCLHDITGSDLGTLRLLTFLRPKWITIVEQDLTHGDSFPGRFVEALHYYSALFDALGDSLAADSVERHMVELEQQLFGSEIRNIVAVGGPVRNGGKVGSELRKNPPAQASLLLGMFPRKGCTLVEENGCLKLGGKDLSLLTASAQPSD 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28014474 28014996 + BLOR02697 Blo10g00907 66103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00907 169 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 166 IPR005202 -
Blo10g00907 169 PANTHER SCARECROW-LIKE PROTEIN 23 3 166 - -
Blo10g00907 169 Pfam GRAS domain family 3 165 IPR005202 -
Blo10g00907 169 ProSiteProfiles GRAS family profile. 1 167 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00907 Blo-Chr10:28014474 Blo05g00280 Blo-Chr5:3067637 1.11E-34 dispersed
Blo10g00907 Blo-Chr10:28014474 Blo07g00834 Blo-Chr7:26522441 8.93E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12861 PF03514 GRAS 3.90E-25 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00907 - - tcc:18612257 245.358