Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00919 ATGAGCAAAAATGTGGCTTTTCTTATCCCCGTTTTTGCATTTCTTGCGTCCAGGATTATCTTCGATCCGACCTCGAGATTTATGGAACATTTGATCGATCTCACCCTCCAAAAGTCAGCTCTGCAAGTTTCTTTTTTGACCCTGTCTTCCTATGCAAGGCCTCACCATTACAAAAAACCAGAGGAAATCGTCTCCGTTTGCGATGATTTTCCGGTCAATTTCCCGACTGTGGACACCAACACGACTTCTTTCTTCTGCGTCGATCGGAATGGGTGCTGTAACTTCACGACGGTTCAAGCCGCGGTTGATGCAGTTCCGGTTTCAAGCCTCAAACGGAACTTAATTTGGATCAACTCCGGGATTTACCATGAGAAAGTGATCATTCCAATATCCAAGCCAAACATTACATTTCAAGGCCAAGGCTTCACGTCGACCGGAATTTCTTGGAACGACACTGCCAATTCTTCGCACGGCACGTTTTACAGTGGTTCTGTTCAAGTGTTTTCTGCCAACTTCATCGCTAAAAACATCAGCTTCATGAATGTGGCTCCCATTCCGAAACCAGGCGACAAGGGAGCTCAAGCTGTGGCCATTAGAATCGCCGGAGACCAATCGGCGTTCTGGGGGTGTGGCTTTTTCGGAGCGCAGGATACCCTTCACGATGACAGAGGTCGCCATTACTTCAAGGAATGCTATATTCAGGGCTCCATCGATTTCATCTTCGGCAATGGAAAATCATTCTATGAGAACTGCCAGTTGATATCGATGGCGAACCCAGTAAGTCCGGGGCAAAGGGGGATAAACGGCGCGGTGACGGCGAACGGAAGGGCGTCGAAGGACGAGAACTCGGGCTTTGCTTTCGTCAACTGCAGCGTCGGAGGCAGTGGAAGGGTGTGGCTGGGGAGGGCGTGGCGGCCATTTTCGCGCGTCGTCTTCGCCCTCTGCACCATGTCTGAAATCATAGCTCCGGAGGGTTGGAATGACTGGAACGATCCCACCAGTGACTCGTCGATCTTCTATGGAGAATATAACTGCACAGGCCCAGGTTCAAACGTCACACTCAGGGCTGCATACGTTCAAAGACTGAATGAAACACAAGTCTCCCCTTTCCTCAACCTCTCTTTCATCGATGCTGACCAATGGCTGCAACCCTACTACTCGGATTAA 1167 49.79 MSKNVAFLIPVFAFLASRIIFDPTSRFMEHLIDLTLQKSALQVSFLTLSSYARPHHYKKPEEIVSVCDDFPVNFPTVDTNTTSFFCVDRNGCCNFTTVQAAVDAVPVSSLKRNLIWINSGIYHEKVIIPISKPNITFQGQGFTSTGISWNDTANSSHGTFYSGSVQVFSANFIAKNISFMNVAPIPKPGDKGAQAVAIRIAGDQSAFWGCGFFGAQDTLHDDRGRHYFKECYIQGSIDFIFGNGKSFYENCQLISMANPVSPGQRGINGAVTANGRASKDENSGFAFVNCSVGGSGRVWLGRAWRPFSRVVFALCTMSEIIAPEGWNDWNDPTSDSSIFYGEYNCTGPGSNVTLRAAYVQRLNETQVSPFLNLSFIDADQWLQPYYSD 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28097722 28100297 + BLOR02709 Blo10g00919 66115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00919 388 Gene3D - 79 387 IPR012334 -
Blo10g00919 388 Pfam Pectinesterase 87 378 IPR000070 GO:0030599|GO:0042545
Blo10g00919 388 ProSitePatterns Pectinesterase signature 2. 233 242 IPR033131 -
Blo10g00919 388 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 385 - -
Blo10g00919 388 PANTHER PECTINESTERASE 8-RELATED 10 385 - -
Blo10g00919 388 SUPERFAMILY Pectin lyase-like 85 386 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00532 Blo-Chr9:16528670 Blo10g00919 Blo-Chr10:28097722 1.56E-137 dispersed
Blo10g00084 Blo-Chr10:803893 Blo10g00919 Blo-Chr10:28097722 1.86E-59 dispersed
Blo10g00919 Blo-Chr10:28097722 Blo14g00522 Blo-Chr14:7391923 9.80E-94 dispersed
Blo10g00919 Blo-Chr10:28097722 Blo05g00245 Blo-Chr5:2743288 7.36E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00919 - - zju:107416847 585.104