Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00929 ATGCGCCCGGCTACTTTTTTGTTGTGGATTTTATTGGTGGTGCTTCTGGGGGTTCCAGTTAAATCAAAAACGGACGCGCCAGATGTCTCTGCGCTTAATGTGATGTTTACTAGTTTGAATTCTCCCTCACAATTGCCTGGGTGGAAATCTAGTGGAGGTGATCCCTGTGATGAATCATGGGAAGGAATCAAATGCTCAGGCTCGTCAGTGACTGAAATAAGTTTATCCGACTTCGGACTTAGTGGATCGATGGGATACCAGCTATCAAGTTTGACATCTGTCACCTATTTTGATTTAAGCAAGAACAACCTCGGGGGAGATATTCCATATCAACTTCCACCCAATGCAATTCACATAGATCTTTCAGAGAATAGCTTCACGGGTAGTGTACCTTATTCCATTTCTCAGATGGCTGATCTTGAATCCTTGGATCTCTCGCACAATTCTTTGTCAGGAAATTTGCCTCAAAGTTTTAAGAAACTCTCAAGTCTTACCTCCCTGTATTTAGAGGACAATCAATTTTCTGGTACAATCAATGTTCTTGCGAGCCTCTCTCTTGACACCTTCTGTAAGTTGACATCTTGCTCTTGCAATATTGTTTCGTTGACAGGAATATTGAAGACAACCAGTTTACTGGCTGGATTCCTGACGAGTACTGGTGGAAATTCATGGTCAACTGGACCAGCTCCTCCTCCTCCACCTGGTGGACAAGTCCATGATAACAATGAGTCGGATAGGAAGGATGCTGGGAAGTCAGTTTTGAGTGCACTAGTGATAACCAGTGTAGCTTTGGGCGTTTTAGTGATCCTTGTAATTGGAATTGCTGTTTTTTCAAGACGATCGTCTTCACCTTCAATACATTTTCTCGATGAGGAGGCAGAACGAAGATCTTTTACTCCTCTTACATCTCAGGAGTTGCCATCAAACTTCCGTCCTGATAAACCAAAAAACTTCGAAGAGCTCAAATCATTTAACTCATCTGCCTCTATTGATGCTAAGACTTTGCAAAAATCTCCTTCGATTGGCAATAAGCACTCAACTTCTGATCGTAGACAGTCCTTTACTGATAGTGAATTTGCAAACCGACTAAATGCGAGAAGAAGTATTTCAGCTTCTGCTACAAGTTATTCTTTGGCAGATTTGCAGACTGCCACTGCTAATTTTGCTACAGGCCGTCTTCTTGGTGAGGGTTCCATTGGACGTGTTTATAGAGCTAAATATGCTGATGGAAAGGTTACAGCTGTGAAAAAAATAGAGTCATCTCTTTTTCAAGGACGGCAGCCGGAAGAATTTTCTGAGATTGTAGCTAACATGGAGAAACTTCACCACCCAAACATTGCAGAGCTTTTAGGATATTGTTCAGAACAAGGGCATCACATGTTAATCTTTGATTATTTCAGGAACGGCTCCCTTCATGAATACTTGCACATGTCAGATGACTTTAGCAAACCACTAACTTGGAATACTAGAGTTAGAATCGCCTTGGGAATGGCGAGGGCCATTGAGTACCTCCATGAGGTGTGTTCACCGTCTTTAATTCACAAGAACATAAAGTCGTCTAATATTCTGCTGGACACTGAGCTCAATCCCCATCTCTCTGACTGTGGATTGGCAACTTTCTATGAGCGTACTAGCAAAAATCTGGAAGTTGGGTATTGTGCCCCTGAGTGCAATGAGCCATCGGCTTATACATTGAAGAGTGATGTGTACAGTTTTGGAGTGGTGATGTTGGAGTTGTTGACGGGTCGAATGCCTTTTGATAGTTCAAAAGCAAAGCCAGAACAGTGCCTGGTCTGGTGGGCAAGCCCACAGCTCCATGACATTGATGCTTTGGCAAAAATGGTCGACCCTGCATTGCGCGGATTGTACCCTCCCAAATCGGTATCTCGGTTTGCTGATATCATTGCCCTCTGCGTACAGTCTGAGCCTGAATTTAGGCCTCCAATGTCAGAGGTGGTGCAAGCATTGGTCCGGGTAGTTCAACGGTCGAGCATGACAATGAGGGATGATCTCGGAGCAAGCTTCTCGTCGGACGGATGA 2040 43.82 MRPATFLLWILLVVLLGVPVKSKTDAPDVSALNVMFTSLNSPSQLPGWKSSGGDPCDESWEGIKCSGSSVTEISLSDFGLSGSMGYQLSSLTSVTYFDLSKNNLGGDIPYQLPPNAIHIDLSENSFTGSVPYSISQMADLESLDLSHNSLSGNLPQSFKKLSSLTSLYLEDNQFSGTINVLASLSLDTFCKLTSCSCNIVSLTGILKTTSLLAGFLTSTGGNSWSTGPAPPPPPGGQVHDNNESDRKDAGKSVLSALVITSVALGVLVILVIGIAVFSRRSSSPSIHFLDEEAERRSFTPLTSQELPSNFRPDKPKNFEELKSFNSSASIDAKTLQKSPSIGNKHSTSDRRQSFTDSEFANRLNARRSISASATSYSLADLQTATANFATGRLLGEGSIGRVYRAKYADGKVTAVKKIESSLFQGRQPEEFSEIVANMEKLHHPNIAELLGYCSEQGHHMLIFDYFRNGSLHEYLHMSDDFSKPLTWNTRVRIALGMARAIEYLHEVCSPSLIHKNIKSSNILLDTELNPHLSDCGLATFYERTSKNLEVGYCAPECNEPSAYTLKSDVYSFGVVMLELLTGRMPFDSSKAKPEQCLVWWASPQLHDIDALAKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVRVVQRSSMTMRDDLGASFSSDG 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28355908 28361762 + BLOR02719 Blo10g00929 66125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00929 679 Gene3D Transferase(Phosphotransferase) domain 1 466 674 - -
Blo10g00929 679 MobiDBLite consensus disorder prediction 223 247 - -
Blo10g00929 679 SUPERFAMILY L domain-like 26 204 - -
Blo10g00929 679 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Blo10g00929 679 Pfam Protein tyrosine and serine/threonine kinase 390 656 IPR001245 GO:0004672|GO:0006468
Blo10g00929 679 MobiDBLite consensus disorder prediction 332 348 - -
Blo10g00929 679 MobiDBLite consensus disorder prediction 332 355 - -
Blo10g00929 679 Gene3D Ribonuclease Inhibitor 26 222 IPR032675 -
Blo10g00929 679 ProSiteProfiles Protein kinase domain profile. 388 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo10g00929 679 SUPERFAMILY Protein kinase-like (PK-like) 369 656 IPR011009 -
Blo10g00929 679 Gene3D Phosphorylase Kinase; domain 1 349 465 - -
Blo10g00929 679 PANTHER OS01G0253100 PROTEIN 19 676 IPR045271 GO:0004714|GO:0006468
Blo10g00929 679 Pfam Leucine rich repeat 119 174 IPR001611 GO:0005515
Blo10g00929 679 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 19 676 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00929 Blo-Chr10:28355908 Blo10g00947 Blo-Chr10:28553228 5.84E-176 dispersed
Blo10g00929 Blo-Chr10:28355908 Blo07g00813 Blo-Chr7:26124914 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84507 PF07714 PK_Tyr_Ser-Thr 1.10E-44 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00929 - - jre:109004269 871.307