Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00944 ATGAAGCTCTCCCCCGCGCCGAGCGACCAGGATTTGGAGGCAGCATCTGGCTCCGCCGGAGACTTCGTTGAAGAGGACGACGATTCCATCGCTTCCGATCCTTTTGACATCCAGAGTACGAAGAAAGCTCCTCTTGCGGCTTTCAGGCGGTGGCGGCAAGCTGCTCTGGTGCTAAATGCTTCTAGAAGGTTCCGGTATACTTTGGACTTGAAGAAGGAAGAAGAAAAAGAGCAAAGAAGACGGATGATAAGGGCCCATTCACAAGTCATACGAGCAGCATTGCTTTTCAAATTGGCTGGGGAGAGGCAAATTGGATCAGTCTCTTCGACAGAATCGCCCAATTACAGTGGGGATTATGGGGTTCAATTGGAACAACTTGTATCGTTAACCAGAGATCATAATTTTTCCGCTCTACAACAATATGGAGGGGCAAACTATTTCCTTCACCAGGTTAAAGGGCTAGCAAATGTGCTGAAAACGAATCTACAGAAAGGAATTCCGGGAGATGATTCGGATCTATCACAACGAAGAAATGCATTTGGATCAAATACATATCCTCGCAAAAAAGGGCGGAGTTTTTGGAGGTTCCTTTGGGAAGCTTGGCAAGATTTGACTCTTATCATATTAATCATTGCTGCCGTTGCATCGTTAGTTTTGGGAATAAAAACGAAGGGTCTCGAGGAAGGATGGCTGGATGGAGGGAGTATAACATTTGCTGTTCTTTTAGTAATAATGGTTACAGCTGTTAGCGATTATCGGCAATCACTCCAATTTCAAAATTTAAACGAGGAAAAGCAAAATATACAAATGGAGATCATGAGGGATGGTAGAATCGAAAAGGTGTCAATATTTGATATTGTTGTTGGTGATGTCATACCTCTCAGAATAGGTGATCAGGTCCCTGCTGATGGAATTTTGGTTAGCGGTCATTCACTTGCCATAGATGAGTCTAGCATGACAGGAGAAAGCAAGATTGTCCATAAAGACCATAAAACCCCTTTTTTGATGTCTGGGTGTAAAGTGGCAGATGGAGTTGGTAGTATGTTGGTTACTGGTGTTGGAATCAACACTGAATGGGGGTTATTGATGGCAAGTATTTCAGAGGATACTGGCGAGGAGACCCCCCTGCAGGTACGCTTGAATGGAGTTGCAACTTTCATAGGCATTGTTGGGCTTGCAGTTGCTTTGTCTGTGCTGTCAGTCCTTCTGGGCAGATACTTGACCGGACATACCACAAATTCCGATGGGACTGTACAGTTTAAGATGGGCAAGACTAGCCTTGGCGATGCTGTAGATGGAGTCATTAAAATTGTCACTGTTGCTGTGACCATTGTGGTTGTTGCAGTTCCAGAAGGACTCCCCTTGGCTGTTACTCTGACTTTAGCTTATTCCATGCGCAAAATGATGGCAGATAAAGCCTTGGTTCGTCGGCTGTCTGCCTGTGAAACCATGGGTTCTGCAACGACTATTTGTAGCGATAAGACAGGAACATTGACGCTGAATCAGATGACTGTGGTTGAAACTTATGTGGGAAGAAAGAAGATCAATCCAGTTGATGATTCTTCGCAGTTGCATCCAGCCGTATTGTCTCTCCTAAGTGAAGGCATTGCACAGAATAGCACAGGGAACGTTTTTGTGCCTAAGGGTGGTGAAGGAGTCGAGGTTTCTGGATCTCCTACTGAAAAAGCTTTACTGTCTTGGGCCGTCAAGCTTGGAATGAAGTTTGATGTTGTTAGGTCAGAATCCAAAGTTCTCCAAGTTTTTCCTTTCAACTCAGAGAAGAAGAGAGGAGGTGTTGCAGTAAAGCAGGTTGACTCAAAAGTTCATGTACACTGGAAGGGAGCGGCTGAGGTAGTTTTAGCTTCCTGCACAGAGTATCTTGACTTGAATGGTGATTTACGGTCAATTGATGAAGATAAGGAATTTTTTAAGGTGGCTATAGATGATATGGCTGCAAGATGTTTGCGATGTATTGCCATTGCATACAAAGTTCCAGAGTTAGATAAAGTTCCAACTGATGAGGAGCATCTAGCTCAATGGGCTCTACCGGAAGAAGATCTTGTCTTGCTCGCTATAGTTGGTATAAAGGATCCTTGTCGTCCTGGCGTAAAAACTGCAGTGAAAGTATGCTCAGATGCTGGTGTAAAGGTGCGCATGGTTACAGGAGATAATCTGCAAACTGCAAAAGCTATATCTTTAGAGTGTGGGATACTTGATTCAAGTGAAGATGCGACTGAACCTCGTATCATTGAAGGAAAAGTATTCCGGGCACTTTCTGAGAAGGAAAGAGAACAAATGGCCGATAAGATTACAGTGATGGCAAGATCTTCTCCCAATGACAAGCTTTTGCTTGTCCAAGCTCTGCGAAAGAGAGGAGAAGTTGTTGCTGTTACGGGAGACGGGACTAATGATGCTCCTGCACTCCATGAGGCAGATATTGGACTTTCCATGGGTATTCAAGGAACAGAAGTTGCAAAAGAAAGTTCTGATATTGTTATCTTGGACGACAACTTTGCTTCAGTTGTGAAGGTTGTCCGCTGGGGGCGTTCTGTGTACGCAAATATTCAGAAGTTCATCCAATTCCAGCTAACAGTAAATGTTGCAGCTCTTGTAATTAATGTTGTTGCAGCAATATCTTCCGGCGATGTTCCTTTAAATACAGTGCAGCTTTTGTGGGTTAACCTAATCATGGATACACTCGGTGCACTAGCTTTGGCAACTGAACCACCAACTGACCACCTCATGAGCAGACGTCCTGTCGGCCGAAGGGAGCCTCTTATAACAAATATTATGTGGAGGAATCTGATCATACAGGCTTTATATCAAGTGGGTGTGCTCCTAGTTCTTAACTTCTGGGGTTCCAATATTCTTGATCTAAATGTTGATAGCACAAGGGCGCATGTTGTTGAAGTGAAGAATACAGTCATATTCAATGCTTTCGTCCTCTGCCAAATATTCAATGAGGTCAATGCTCGAAAGCCGGATGAAATGAACGTATTCAGTGGAATAACTAAAAACAATCTCTTCATGGCAATTGTTGGAGGGACCTTTCTACTTCAAATCATCATCATCCAATTTCTTGGCAAATTTACATCGACAGTGAGACTCAACTTGGAGCAATGGCTAGTGAGCCTTGGAATCGGTCTTGTTGGCTGGCCTCTGGCCGCAATTGGAAAGCTCATTCCAGTTCCGAAGACCCCATTTGCCAAATATTTCAGCAAGTGCAGTCCAATCCACCGACGCAGAAACACTTGA 3255 44.09 MKLSPAPSDQDLEAASGSAGDFVEEDDDSIASDPFDIQSTKKAPLAAFRRWRQAALVLNASRRFRYTLDLKKEEEKEQRRRMIRAHSQVIRAALLFKLAGERQIGSVSSTESPNYSGDYGVQLEQLVSLTRDHNFSALQQYGGANYFLHQVKGLANVLKTNLQKGIPGDDSDLSQRRNAFGSNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAVASLVLGIKTKGLEEGWLDGGSITFAVLLVIMVTAVSDYRQSLQFQNLNEEKQNIQMEIMRDGRIEKVSIFDIVVGDVIPLRIGDQVPADGILVSGHSLAIDESSMTGESKIVHKDHKTPFLMSGCKVADGVGSMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLAVALSVLSVLLGRYLTGHTTNSDGTVQFKMGKTSLGDAVDGVIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETYVGRKKINPVDDSSQLHPAVLSLLSEGIAQNSTGNVFVPKGGEGVEVSGSPTEKALLSWAVKLGMKFDVVRSESKVLQVFPFNSEKKRGGVAVKQVDSKVHVHWKGAAEVVLASCTEYLDLNGDLRSIDEDKEFFKVAIDDMAARCLRCIAIAYKVPELDKVPTDEEHLAQWALPEEDLVLLAIVGIKDPCRPGVKTAVKVCSDAGVKVRMVTGDNLQTAKAISLECGILDSSEDATEPRIIEGKVFRALSEKEREQMADKITVMARSSPNDKLLLVQALRKRGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMSRRPVGRREPLITNIMWRNLIIQALYQVGVLLVLNFWGSNILDLNVDSTRAHVVEVKNTVIFNAFVLCQIFNEVNARKPDEMNVFSGITKNNLFMAIVGGTFLLQIIIIQFLGKFTSTVRLNLEQWLVSLGIGLVGWPLAAIGKLIPVPKTPFAKYFSKCSPIHRRRNT 1084
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28508262 28518851 + BLOR02734 Blo10g00944 66140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00944 1084 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 695 IPR023299 GO:0000166
Blo10g00944 1084 Pfam E1-E2 ATPase 269 469 - -
Blo10g00944 1084 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 146 1063 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Blo10g00944 1084 MobiDBLite consensus disorder prediction 1 36 - -
Blo10g00944 1084 Gene3D - 45 98 - -
Blo10g00944 1084 Pfam Cation transport ATPase (P-type) 551 625 - -
Blo10g00944 1084 SUPERFAMILY Calcium ATPase, transmembrane domain M 146 1063 IPR023298 -
Blo10g00944 1084 Pfam Cation transporter/ATPase, N-terminus 150 216 IPR004014 -
Blo10g00944 1084 Pfam Cation transporting ATPase, C-terminus 883 1061 IPR006068 -
Blo10g00944 1084 PANTHER CATION TRANSPORTING ATPASE 23 1077 - -
Blo10g00944 1084 Gene3D - 501 698 IPR023299 GO:0000166
Blo10g00944 1084 SFLD p-type atpase 473 850 IPR044492 -
Blo10g00944 1084 ProSitePatterns E1-E2 ATPases phosphorylation site. 493 499 IPR018303 -
Blo10g00944 1084 Gene3D - 488 843 IPR023214 -
Blo10g00944 1084 CDD P-type_ATPase_Ca_PMCA-like 173 931 - -
Blo10g00944 1084 Gene3D - 171 367 - -
Blo10g00944 1084 SMART Cation_ATPase_N_a_2 147 221 IPR004014 -
Blo10g00944 1084 PANTHER CALCIUM-TRANSPORTING ATPASE 23 1077 - -
Blo10g00944 1084 SUPERFAMILY Calcium ATPase, transduction domain A 269 364 IPR008250 -
Blo10g00944 1084 SUPERFAMILY HAD-like 489 903 IPR036412 -
Blo10g00944 1084 Gene3D - 199 1052 - -
Blo10g00944 1084 SFLD Haloacid Dehalogenase 473 850 - -
Blo10g00944 1084 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 431 514 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo10g00944 1084 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 765 878 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo10g00944 1084 PRINTS P-type cation-transporting ATPase superfamily signature 713 723 - -
Blo10g00944 1084 PRINTS P-type cation-transporting ATPase superfamily signature 315 329 - -
Blo10g00944 1084 PRINTS P-type cation-transporting ATPase superfamily signature 798 817 - -
Blo10g00944 1084 PRINTS P-type cation-transporting ATPase superfamily signature 491 505 - -
Blo10g00944 1084 PRINTS P-type cation-transporting ATPase superfamily signature 691 702 - -
Blo10g00944 1084 PRINTS P-type cation-transporting ATPase superfamily signature 822 834 - -
Blo10g00944 1084 Pfam Ca2+-ATPase N terminal autoinhibitory domain 33 75 IPR024750 GO:0005516
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00399 Blo-Chr9:14921019 Blo10g00944 Blo-Chr10:28508262 0 dispersed
Blo10g00944 Blo-Chr10:28508262 Blo12g00345 Blo-Chr12:19397056 0 dispersed
Blo13g01094 Blo-Chr13:33078654 Blo10g00944 Blo-Chr10:28508262 1.78E-108 dispersed
Blo16g00830 Blo-Chr16:34756542 Blo10g00944 Blo-Chr10:28508262 1.24E-50 dispersed
Blo16g00873 Blo-Chr16:36290757 Blo10g00944 Blo-Chr10:28508262 0 dispersed
Blo10g00944 Blo-Chr10:28508262 Blo12g00987 Blo-Chr12:27907713 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00944 K01537 - mnt:21385058 1607.42