Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00955 ATGAATGACTTCAACCCACTGATGGCCAGAGTGCCAGATTCCGGCAATCGACCATGCGTAACGGAGCAAAAGAAGAAGAAGCTCTTATTCTGGGCTCTCTCTGCTGTTATTCTAATTTCTGATGTCATCGGAGTTGCAGTCGGAGTTGAGTCGACAGAAACCTCCGATGTGGTCGAGACTTTTCCTTCTTCCCATTCTACTATCAAAGCCTCTTGCAGCTCCACTTTATACCCCGATTTATGCGTCTCCGCCATTACCTCTGTCGACGGAGCTAGCAAAAAAGTCTCCGGCCCAAAGGACGTCATCGTGGTGTCGTTAAATATCACTATCGCTGCAGTGAGGAAAAATTATTTGGCCGTTAAAAAGCTTAGAACCAGAAAAGGATTGACCAAGCGCGAGTTGGTTGCGGTCCATGATTGTATTGATAACTTGGAAGACACCCTCTCCGAGCTCGACAAGGCTGTAGAGGATCTCCATTTGTACCCAACTAAGAAATCTCTAACCCAGCACGCCGACGACCTTAAGACTTTGCTCAGCTCCACAATCACCAACCAGGAATCTTGCTTAGACGGGTTCTCTTACAACGATGCCGACAGAAAGGTGAGGAAGGCGCTGCTGCTCAGGGCGGAGATCTATATCGAGAAATTGTGCAGTAATGTTTTGGCGATGATTAAGAACATGACGGACACTGATATAATCAACGAGAGAAAAATGATGGGAAGGAAGAAGCTGACGGAGGACGTGGGTCATGACGACATAAAGTGGCCGGATTGGCTGTCGGGTTCCGACAGACGGCTGTTGCAGTCGACTTCAGTGACACCGAATGTGGTGGTGGCAGCCGACGGCAGTGGGGACTACCGGACTGTCTCAGCAGCAGTGGCAGCCGCACCGTCAAGTAGTTCTACCAGATACGTTATCAGAATCAAGGCGGGAGTCTACCGGGAAAATGTAGATGTGCCGAGGAGCAAGAGCAATATTATGTTTTTGGGAGATGGAAAAACCACCACCATCATCACCGGAAGTAGGAATGTAGTTGACGGGAGCACCACTTTCAACTCTGCAACAGTTGCGGCGGTCGGCGATAATTTTCTGGCGCGGGACATTACCTTCCAAAACACTGCCGGTCCGTCCAAGCACCAGGCCGTCGCTCTACGTGTTGGGTCCGATCTCTCCGCCTTTTACCGATGTGATATGCTTGCCTATCAAGATACCCTCTACGTCCACTCCAACCGTCAATTCTTTGTAGAGTGCTTCATCGCCGGCACCGTTGATTTCATCTTCGGCAACGGTGCCGCCGTCCTTCAAAGGTGCGACATCCGTGCACGTCGACCAAACTCCGGCCAGAGGAACATGGTCACCGCCCAAGGCCGAACCGACCCGAACCAAAACACCGGCATTGTCATCCAAAATTGTAATATCGCCGCCACCTCCGATCTCGCTGCTGTTCAGAGCAGTTTCCCAACGTATCTCGGACGACCATGGAAGCAATACTCGAGGACAGTGATTATGCAAACGGCGATAAGCAATGTGATAAACCCAGCCGGATGGCACATCTGGGACGGGGATTTTGCTCTCGACACATTGTTCTACGGCGAGTATAGGAATACCGGAGCCGGAGCGGACACATCGAGGAGGGTGACATGGACAGGTTTCAGGGTGATCACCAGTGCTACTGAGGCACAGGCTTTTACTCCGGGAAGGTTCATCGCCGGTGGCAGTTGGTTGAGTGGCACTGGTTTTCCGTTCGCTCTTGGTCTGTAA 1761 51.28 MNDFNPLMARVPDSGNRPCVTEQKKKKLLFWALSAVILISDVIGVAVGVESTETSDVVETFPSSHSTIKASCSSTLYPDLCVSAITSVDGASKKVSGPKDVIVVSLNITIAAVRKNYLAVKKLRTRKGLTKRELVAVHDCIDNLEDTLSELDKAVEDLHLYPTKKSLTQHADDLKTLLSSTITNQESCLDGFSYNDADRKVRKALLLRAEIYIEKLCSNVLAMIKNMTDTDIINERKMMGRKKLTEDVGHDDIKWPDWLSGSDRRLLQSTSVTPNVVVAADGSGDYRTVSAAVAAAPSSSSTRYVIRIKAGVYRENVDVPRSKSNIMFLGDGKTTTIITGSRNVVDGSTTFNSATVAAVGDNFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVECFIAGTVDFIFGNGAAVLQRCDIRARRPNSGQRNMVTAQGRTDPNQNTGIVIQNCNIAATSDLAAVQSSFPTYLGRPWKQYSRTVIMQTAISNVINPAGWHIWDGDFALDTLFYGEYRNTGAGADTSRRVTWTGFRVITSATEAQAFTPGRFIAGGSWLSGTGFPFALGL 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28634906 28637598 + BLOR02745 Blo10g00955 66151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00955 586 Pfam Plant invertase/pectin methylesterase inhibitor 67 223 IPR006501 GO:0004857
Blo10g00955 586 Gene3D - 269 586 IPR012334 -
Blo10g00955 586 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Blo10g00955 586 Pfam Pectinesterase 275 571 IPR000070 GO:0030599|GO:0042545
Blo10g00955 586 PANTHER PECTINESTERASE 29 585 - -
Blo10g00955 586 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 228 IPR035513 -
Blo10g00955 586 CDD PMEI-like_3 70 228 - -
Blo10g00955 586 TIGRFAM PME_inhib: pectinesterase inhibitor domain 64 227 IPR006501 GO:0004857
Blo10g00955 586 ProSitePatterns Pectinesterase signature 1. 300 319 IPR018040 -
Blo10g00955 586 PANTHER PECTINESTERASE 29 585 - -
Blo10g00955 586 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 228 IPR035513 -
Blo10g00955 586 SMART PMEI_2 63 223 IPR006501 GO:0004857
Blo10g00955 586 SUPERFAMILY Pectin lyase-like 272 585 IPR011050 -
Blo10g00955 586 Coils Coil 141 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00955 Blo-Chr10:28634906 Blo16g00613 Blo-Chr16:24726464 1.46E-146 dispersed
Blo10g00955 Blo-Chr10:28634906 Blo07g00810 Blo-Chr7:25995500 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00955 K01051 - jre:109004988 813.142