Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00957 ATGAACATCAGCTTTGTCAACACAGCCGGAGCAGCCAAGCATCAGGCAGTCGCATTCCGGTCTGGTTCAGACCTTTCGGTCTACTTCGGCTGCTCATTCGATGCCTTCCAAGACACCCTCTATGCCTACTCCAATCGCCAATTCTACCGCAATTGCGACATTACAGGCACCATCGACTTCATGTTTGGCAATGCGGGCTCAGTATTTCAGGACTGCAATATCATGGCTAGGCAGCCACTGGCCAACCAGTTCAACACCATCACAGCACAAGGCAAAACTGACCCTAATCAGAACACCGGCATTTCCATCCAAAAATGCACTATTTCCCCTCTGCCTGGCGGCAATCTCTCTGCTCAGACTTACCTTGGTCGACCATGGAAAAACTATTCCACTACGGTCATCATGCAGTCCGATATTGGGTCGTTTCTCAACCCCTTGGGTTGGATCGAATGGATCATCGGCGTTGAGCCTCCCATAACTATATTTTATGCCGAGTATCAGAACACGGGAGCTGGCTCTTCTGTGGACAAAAGGGTCAGTTGGGCTGGTTATATGCCAGCTTTAACGGAAGACGAAGCCGGAAAATTCACAGTTAACTCTTTCATTCAGGGCAGTGACTGGTTGCCGGCAACATCAGTTACATTTGATGCATCATTGTGA 660 49.24 MNISFVNTAGAAKHQAVAFRSGSDLSVYFGCSFDAFQDTLYAYSNRQFYRNCDITGTIDFMFGNAGSVFQDCNIMARQPLANQFNTITAQGKTDPNQNTGISIQKCTISPLPGGNLSAQTYLGRPWKNYSTTVIMQSDIGSFLNPLGWIEWIIGVEPPITIFYAEYQNTGAGSSVDKRVSWAGYMPALTEDEAGKFTVNSFIQGSDWLPATSVTFDASL 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28640646 28641305 + BLOR02747 Blo10g00957 66153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00957 219 PANTHER PECTINESTERASE 2 216 - -
Blo10g00957 219 SUPERFAMILY Pectin lyase-like 2 216 IPR011050 -
Blo10g00957 219 Pfam Pectinesterase 2 204 IPR000070 GO:0030599|GO:0042545
Blo10g00957 219 Gene3D - 1 219 IPR012334 -
Blo10g00957 219 PANTHER PECTINESTERASE 1-RELATED 2 216 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00808 Blo10g00957 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00957 Blo-Chr10:28640646 Blo16g00613 Blo-Chr16:24726464 5.54E-83 dispersed
Blo10g00957 Blo-Chr10:28640646 Blo05g00293 Blo-Chr5:3296310 6.08E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00957 - - rcu:8276552 360.533