Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00983 ATGTTGAAGGGGCTGTCGTTCAATCAGCAGACTCAGGAGGAAAACATGTCGAATTTGACTTCAGCATCTGGAGAAGCTAGCGTGTCTTCTTCAGGCAACAGAAATGAGGCTCAAGAACTCCAAACTGATCAACCCACAAAAAGGAAAAGAAGTCTTCCAGGAAATCCAGACCCAGATGCAGAAGTGGTGGCTCTATCTCCAAAAACACTCTTGGCAACAAATAGGTTCATTTGTGAGATCTGCGGCAAAGGGTTTCAGAGAGATCAGAATCTGCAACTGCACAGAAGAGGACACAATTTACCATGGAAGCTGAAGCAAAGAACGAGCAAAGAGGTGAAGAAGAAGGTGTACGTCTGTCCGGAATCAAGCTGCGTCCACCATGATCCTTCGAGGGCGCTTGGAGACCTGACAGGAATCAAAAAACATTTTAGCAGAAAACATGGAGAGAAGAGGTGGAAGTGTGAAAAGTGTTCGAAGAAGTATGCTGTTCAATCTGATTGGAAGGCTCATTCTAAAACCTGTGGCACCAGGGAGTACAGATGCGACTGTGGAACCCTCTTCTCAAGGAGGGATAGTTTCATCACTCACAGAGCTTTCTGTGATGCACTAGCTGAGGAAAACGCCAGAGCCATTACAGTCAATCCACTTCTCTCGTCATCTCATCAGCCAGAAGCCTCTTCAATGGCTCATCTTCAAGATCTCCCTTCGTTTTCTTTCAAGAAAGAGCAGCAAAACTTCACTCTCCCGCCATGGTTACCCACTCCATCACCTATGGACAGCATTTCATCTCCTTCCTCAATCTTCTCCCCGAGACTGAACCAAGACTTCACGCAACAAACCCAAAACCCTAACCCTAATCCTGGACCCACCCTCCCTTGCTATCAGTCAGCAGCTTCTTCCCCACACATGTCAGCCACTGCACTGCTGCAGAAGGCAGCTCAGATGGGAGCGACCATGAGTGCGAAGACAGATGTATCACAGCCCATACTGAGGACCCACAGCCAGGCTCACGTGTCTGATTCAACCACCAATACAGGCAGTACTGCCAGAGCCTTTGCCCACAATTCTTTGTCCATATATGGGAATAAAGCTGTTTCCGTTTCAGTTCCTTCTGCCAGTTTTACTGGTGCAGCCCCAAGCGTTCTTCCTAATCCTACTTCGTTTCATGACTTGATGATGACGTCCCTCTCTTCCCCGCCTGGGTTTGAAGATTCATCTTTTGAAGAAGCTTTTGGTGGATTTATGAGCTCGAGAAAAGACGCATCTGCAAAAACAACCGCCGCCGGCGAAGAAGTGGGCGCCGCCGTTCGTGGGGGTGAAGGTTTGACAAGAGATTTCCTGGGGCTGCGAGCTTTCTCTCACAGTGATATCCTAAACATTGCTGGTTTGAGCAACTGCCTAAACACCTCTCAGCCTCATCAGAATCAAACAAAGAGTACATGGCAAGGTACTTATGCTGAACCAAGTGCGATTTGGTTTGTTTTAGTCAATTCTGAAGTGTTGTGTTCGAGCTGGGCCATATATATGTCTGTATTTCTCGTCTCTTTTTCAATGTTTAACGTTGGACTGCTCCGAAACAGCTTTGATATCTTCGTCCCTGCTCCTGTTTCTCAGCTTGGGCTGAACGGAGTGCTGTGTTTCCATAAGATCCAAGCTTCTCTCTTTCTCAAGTCTCTGAGCACCGAAACTCCTGATGGAATTAGACTCTAG 1710 47.37 MLKGLSFNQQTQEENMSNLTSASGEASVSSSGNRNEAQELQTDQPTKRKRSLPGNPDPDAEVVALSPKTLLATNRFICEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVKKKVYVCPESSCVHHDPSRALGDLTGIKKHFSRKHGEKRWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEENARAITVNPLLSSSHQPEASSMAHLQDLPSFSFKKEQQNFTLPPWLPTPSPMDSISSPSSIFSPRLNQDFTQQTQNPNPNPGPTLPCYQSAASSPHMSATALLQKAAQMGATMSAKTDVSQPILRTHSQAHVSDSTTNTGSTARAFAHNSLSIYGNKAVSVSVPSASFTGAAPSVLPNPTSFHDLMMTSLSSPPGFEDSSFEEAFGGFMSSRKDASAKTTAAGEEVGAAVRGGEGLTRDFLGLRAFSHSDILNIAGLSNCLNTSQPHQNQTKSTWQGTYAEPSAIWFVLVNSEVLCSSWAIYMSVFLVSFSMFNVGLLRNSFDIFVPAPVSQLGLNGVLCFHKIQASLFLKSLSTETPDGIRL 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29046214 29049672 + BLOR02773 Blo10g00983 66179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00983 569 MobiDBLite consensus disorder prediction 1 40 - -
Blo10g00983 569 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 98 IPR013087 -
Blo10g00983 569 SUPERFAMILY beta-beta-alpha zinc fingers 75 172 IPR036236 -
Blo10g00983 569 Pfam Zinc finger, C2H2 type 76 98 IPR013087 -
Blo10g00983 569 MobiDBLite consensus disorder prediction 41 55 - -
Blo10g00983 569 MobiDBLite consensus disorder prediction 258 284 - -
Blo10g00983 569 MobiDBLite consensus disorder prediction 248 297 - -
Blo10g00983 569 Gene3D Classic Zinc Finger 72 99 - -
Blo10g00983 569 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 18 465 - -
Blo10g00983 569 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 18 465 - -
Blo10g00983 569 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Blo10g00983 569 SMART c2h2final6 76 98 IPR013087 -
Blo10g00983 569 SMART c2h2final6 117 147 IPR013087 -
Blo10g00983 569 SMART c2h2final6 152 172 IPR013087 -
Blo10g00983 569 Gene3D Classic Zinc Finger 109 200 - -
Blo10g00983 569 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00421 Blo-Chr6:24350637 Blo10g00983 Blo-Chr10:29046214 6.77E-116 dispersed
Blo07g00557 Blo-Chr7:15570678 Blo10g00983 Blo-Chr10:29046214 2.24E-104 dispersed
Blo10g00983 Blo-Chr10:29046214 Blo12g00911 Blo-Chr12:27295851 9.50E-107 dispersed
Blo01g01463 Blo-Chr1:53803380 Blo10g00983 Blo-Chr10:29046214 1.43E-144 transposed
Blo01g01759 Blo-Chr1:57342509 Blo10g00983 Blo-Chr10:29046214 1.91E-27 transposed
Blo05g00762 Blo-Chr5:27494915 Blo10g00983 Blo-Chr10:29046214 6.71E-26 transposed
Blo10g00983 Blo-Chr10:29046214 Blo05g00053 Blo-Chr5:512809 3.76E-178 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12865 PF00096 zf-C2H2 0.0068 CL0361 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00983 K25870 - qsu:111995117 579.711