Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo10g00983 | ATGTTGAAGGGGCTGTCGTTCAATCAGCAGACTCAGGAGGAAAACATGTCGAATTTGACTTCAGCATCTGGAGAAGCTAGCGTGTCTTCTTCAGGCAACAGAAATGAGGCTCAAGAACTCCAAACTGATCAACCCACAAAAAGGAAAAGAAGTCTTCCAGGAAATCCAGACCCAGATGCAGAAGTGGTGGCTCTATCTCCAAAAACACTCTTGGCAACAAATAGGTTCATTTGTGAGATCTGCGGCAAAGGGTTTCAGAGAGATCAGAATCTGCAACTGCACAGAAGAGGACACAATTTACCATGGAAGCTGAAGCAAAGAACGAGCAAAGAGGTGAAGAAGAAGGTGTACGTCTGTCCGGAATCAAGCTGCGTCCACCATGATCCTTCGAGGGCGCTTGGAGACCTGACAGGAATCAAAAAACATTTTAGCAGAAAACATGGAGAGAAGAGGTGGAAGTGTGAAAAGTGTTCGAAGAAGTATGCTGTTCAATCTGATTGGAAGGCTCATTCTAAAACCTGTGGCACCAGGGAGTACAGATGCGACTGTGGAACCCTCTTCTCAAGGAGGGATAGTTTCATCACTCACAGAGCTTTCTGTGATGCACTAGCTGAGGAAAACGCCAGAGCCATTACAGTCAATCCACTTCTCTCGTCATCTCATCAGCCAGAAGCCTCTTCAATGGCTCATCTTCAAGATCTCCCTTCGTTTTCTTTCAAGAAAGAGCAGCAAAACTTCACTCTCCCGCCATGGTTACCCACTCCATCACCTATGGACAGCATTTCATCTCCTTCCTCAATCTTCTCCCCGAGACTGAACCAAGACTTCACGCAACAAACCCAAAACCCTAACCCTAATCCTGGACCCACCCTCCCTTGCTATCAGTCAGCAGCTTCTTCCCCACACATGTCAGCCACTGCACTGCTGCAGAAGGCAGCTCAGATGGGAGCGACCATGAGTGCGAAGACAGATGTATCACAGCCCATACTGAGGACCCACAGCCAGGCTCACGTGTCTGATTCAACCACCAATACAGGCAGTACTGCCAGAGCCTTTGCCCACAATTCTTTGTCCATATATGGGAATAAAGCTGTTTCCGTTTCAGTTCCTTCTGCCAGTTTTACTGGTGCAGCCCCAAGCGTTCTTCCTAATCCTACTTCGTTTCATGACTTGATGATGACGTCCCTCTCTTCCCCGCCTGGGTTTGAAGATTCATCTTTTGAAGAAGCTTTTGGTGGATTTATGAGCTCGAGAAAAGACGCATCTGCAAAAACAACCGCCGCCGGCGAAGAAGTGGGCGCCGCCGTTCGTGGGGGTGAAGGTTTGACAAGAGATTTCCTGGGGCTGCGAGCTTTCTCTCACAGTGATATCCTAAACATTGCTGGTTTGAGCAACTGCCTAAACACCTCTCAGCCTCATCAGAATCAAACAAAGAGTACATGGCAAGGTACTTATGCTGAACCAAGTGCGATTTGGTTTGTTTTAGTCAATTCTGAAGTGTTGTGTTCGAGCTGGGCCATATATATGTCTGTATTTCTCGTCTCTTTTTCAATGTTTAACGTTGGACTGCTCCGAAACAGCTTTGATATCTTCGTCCCTGCTCCTGTTTCTCAGCTTGGGCTGAACGGAGTGCTGTGTTTCCATAAGATCCAAGCTTCTCTCTTTCTCAAGTCTCTGAGCACCGAAACTCCTGATGGAATTAGACTCTAG | 1710 | 47.37 | MLKGLSFNQQTQEENMSNLTSASGEASVSSSGNRNEAQELQTDQPTKRKRSLPGNPDPDAEVVALSPKTLLATNRFICEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVKKKVYVCPESSCVHHDPSRALGDLTGIKKHFSRKHGEKRWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEENARAITVNPLLSSSHQPEASSMAHLQDLPSFSFKKEQQNFTLPPWLPTPSPMDSISSPSSIFSPRLNQDFTQQTQNPNPNPGPTLPCYQSAASSPHMSATALLQKAAQMGATMSAKTDVSQPILRTHSQAHVSDSTTNTGSTARAFAHNSLSIYGNKAVSVSVPSASFTGAAPSVLPNPTSFHDLMMTSLSSPPGFEDSSFEEAFGGFMSSRKDASAKTTAAGEEVGAAVRGGEGLTRDFLGLRAFSHSDILNIAGLSNCLNTSQPHQNQTKSTWQGTYAEPSAIWFVLVNSEVLCSSWAIYMSVFLVSFSMFNVGLLRNSFDIFVPAPVSQLGLNGVLCFHKIQASLFLKSLSTETPDGIRL | 569 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 29046214 | 29049672 | + | BLOR02773 | Blo10g00983 | 66179 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo10g00983 | 569 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Blo10g00983 | 569 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 76 | 98 | IPR013087 | - | |
Blo10g00983 | 569 | SUPERFAMILY | beta-beta-alpha zinc fingers | 75 | 172 | IPR036236 | - | |
Blo10g00983 | 569 | Pfam | Zinc finger, C2H2 type | 76 | 98 | IPR013087 | - | |
Blo10g00983 | 569 | MobiDBLite | consensus disorder prediction | 41 | 55 | - | - | |
Blo10g00983 | 569 | MobiDBLite | consensus disorder prediction | 258 | 284 | - | - | |
Blo10g00983 | 569 | MobiDBLite | consensus disorder prediction | 248 | 297 | - | - | |
Blo10g00983 | 569 | Gene3D | Classic Zinc Finger | 72 | 99 | - | - | |
Blo10g00983 | 569 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 18 | 465 | - | - | |
Blo10g00983 | 569 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 7 | 18 | 465 | - | - | |
Blo10g00983 | 569 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 78 | 98 | IPR013087 | - | |
Blo10g00983 | 569 | SMART | c2h2final6 | 76 | 98 | IPR013087 | - | |
Blo10g00983 | 569 | SMART | c2h2final6 | 117 | 147 | IPR013087 | - | |
Blo10g00983 | 569 | SMART | c2h2final6 | 152 | 172 | IPR013087 | - | |
Blo10g00983 | 569 | Gene3D | Classic Zinc Finger | 109 | 200 | - | - | |
Blo10g00983 | 569 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g00421 | Blo-Chr6:24350637 | Blo10g00983 | Blo-Chr10:29046214 | 6.77E-116 | dispersed | |
Blo07g00557 | Blo-Chr7:15570678 | Blo10g00983 | Blo-Chr10:29046214 | 2.24E-104 | dispersed | |
Blo10g00983 | Blo-Chr10:29046214 | Blo12g00911 | Blo-Chr12:27295851 | 9.50E-107 | dispersed | |
Blo01g01463 | Blo-Chr1:53803380 | Blo10g00983 | Blo-Chr10:29046214 | 1.43E-144 | transposed | |
Blo01g01759 | Blo-Chr1:57342509 | Blo10g00983 | Blo-Chr10:29046214 | 1.91E-27 | transposed | |
Blo05g00762 | Blo-Chr5:27494915 | Blo10g00983 | Blo-Chr10:29046214 | 6.71E-26 | transposed | |
Blo10g00983 | Blo-Chr10:29046214 | Blo05g00053 | Blo-Chr5:512809 | 3.76E-178 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12865 | PF00096 | zf-C2H2 | 0.0068 | CL0361 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo10g00983 | K25870 | - | qsu:111995117 | 579.711 |