Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00997 ATGGGGAGAGCTACATGGTGTCTGAACTGCTTTTTAGGAATGAAGAAAGAGGAGGAGCATGCTCATAAACCAAACTCGGCCGTCTCTGATGCTAAAGAGGAGAGATCGGGAAGAGATTCAGCTTCAAAACTCCAGTCCCAACCATCTCTTCCTGCAAATCTCTCTGTTCTAAACTCCTCTTGGCTTAAATCCTACATTTCCGAGTCTGAAAAGGAGCAGAGCAAGCACGCAATTGCGGTGGCTGCGGCCACCGCTGCTGCAGCGGATGCAGCTGTAGCCGCCGCACAGGCCGCAGTGGCAGTTGTGAGGCTTACCAGCCGCGGAAGAGGAGCTTTCTTCAGCGGTGATGCAGGAGAGAAATGGGCGGCCGCTATAAAGATTCAAACTTTCTACAGGGGATATTTGTTTTATTACTTTTCAAATGATTCTGAAAAGGACATTGAAATTCTAATGCTAACTGCTCGGAAGGCACTTAGAGCGCTCAGAGGGCTGGTCAAATTACAAGCACTGGTACGTGGATATCTTGTCCGAAAGCGAGCCGCTGCAACTCTGTGCAGTATGCAAGCTCTGATTCGAGCTCAAACTACTGTTCGATCACAACGTCTTCGCCGTTCTCTCGACAAAGAAAACCGGTTTCTGAACCAAATTCGCTGCAGAAAGTTCTCCGAAAAACTGGATGAGACGGGAGGAACGTATCACAGTCAAAGGTTGTCGTCTTCAATTGAAGTTGCCATTAATGGGCTTGAAGAAAATCCAAAGATCGTCGAAATTGACACGTTCAAACCGAAATCAATGTCTCGTAGATTCACAAGCTCGTTGCCCGAGTGGAGCCATGAGAGGCCTTATCAAACACTCTCGTCGCCATTGATATGCCTTTGTGAACCAGGAACATATCACTCCGTCCATGATTTGGAATGGTGTTTGATGGGCGAGGATAGTAGGTGTCTCACCGCAAACAGCACGCCTCGAGTGGCAAATGCACTGTGCTCAAAAGGCGCAACAGCGGTGGCCAAGAGCGTGTGTGGGGATTCTCTGTTTCGGCCCTACTCAAACTTCCCTAATTACATGGCCAACACGCAGTCATTCAAGGCTAAATTGAGGTCTCAGAGCGCACCAAAGCAAAGACCAGATATTGGGTCCAAAAGAAGGCTTTCACTTCATGAATTAATGGCCGCTAGAAACAGCATTAGTGGAGTCAGAATGCAGAGGACTGGCCGTCTACCTCATGAACCAGAAGCTTTCGATTTCTAA 1251 48.2 MGRATWCLNCFLGMKKEEEHAHKPNSAVSDAKEERSGRDSASKLQSQPSLPANLSVLNSSWLKSYISESEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSRGRGAFFSGDAGEKWAAAIKIQTFYRGYLFYYFSNDSEKDIEILMLTARKALRALRGLVKLQALVRGYLVRKRAAATLCSMQALIRAQTTVRSQRLRRSLDKENRFLNQIRCRKFSEKLDETGGTYHSQRLSSSIEVAINGLEENPKIVEIDTFKPKSMSRRFTSSLPEWSHERPYQTLSSPLICLCEPGTYHSVHDLEWCLMGEDSRCLTANSTPRVANALCSKGATAVAKSVCGDSLFRPYSNFPNYMANTQSFKAKLRSQSAPKQRPDIGSKRRLSLHELMAARNSISGVRMQRTGRLPHEPEAFDF 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29222809 29224375 - BLOR02787 Blo10g00997 66193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00997 416 PANTHER IQ-DOMAIN 5-RELATED 1 407 - -
Blo10g00997 416 MobiDBLite consensus disorder prediction 18 40 - -
Blo10g00997 416 ProSiteProfiles IQ motif profile. 162 189 IPR000048 GO:0005515
Blo10g00997 416 MobiDBLite consensus disorder prediction 363 383 - -
Blo10g00997 416 Pfam IQ calmodulin-binding motif 165 179 IPR000048 GO:0005515
Blo10g00997 416 Pfam IQ calmodulin-binding motif 123 135 IPR000048 GO:0005515
Blo10g00997 416 ProSiteProfiles IQ motif profile. 122 148 IPR000048 GO:0005515
Blo10g00997 416 PANTHER - 1 407 - -
Blo10g00997 416 MobiDBLite consensus disorder prediction 18 48 - -
Blo10g00997 416 Pfam Protein of unknown function (DUF4005) 321 397 IPR025064 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00074 Blo10g00997 CCT
Blo06g00714 Blo10g00997 CCT
Blo05g00074 Blo10g00997 ECH
Blo06g00714 Blo10g00997 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00322 Blo-Chr8:4751322 Blo10g00997 Blo-Chr10:29222809 1.74E-87 dispersed
Blo10g00997 Blo-Chr10:29222809 Blo14g00521 Blo-Chr14:7389636 4.74E-92 dispersed
Blo10g00997 Blo-Chr10:29222809 Blo05g00074 Blo-Chr5:735387 2.30E-101 wgd
Blo10g00997 Blo-Chr10:29222809 Blo06g00714 Blo-Chr6:30238211 8.70E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00997 - - jre:108985053 398.282