Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00033 ATGGCAGGTGGTGGCTGTAGCATAGTATGGTTCAGAAGAGATCTCAGGGTAGAAGATAACCCAGCTTTGACTGCCGGAGTTCGAGCCGGCGCTGTAGTCGCAGTCTTCATCTGGGCGCCGGAAGAAGAAGGCCACTATTATCCCGGAAGGGTGTCACGGTGGTGGCTTAAACAGAGCTTAGGTCAGCTCGATTTCTCTCTGAGAAGTCTCGGCTGCAATCTCGTCACTAAAAGATCGTCTGATAGTGTTTCCGCCTTGCTCGAGGTCGTCAAATCTACCGGCGCAACTCAGCTATTTTTCAACCATTTATACGATCCCTTATCACTGATTCGGGATCACAGAGCGAAGGGGGTGTTAACAGCTGCAGGCATAGCCGTTAGATCATTCAATGCAGATTTACTGTATGAGCCATGGGATGTGAATGACGCCAATGGTCATCCTTTCTCTACCTTTGCACCCTTCTGGGAAAGATGCCTTAGCATGCCTTACGATCCAGAGGCGCCACTTCTCCCACCCAAACGCATAATTCCAGGTGATGTATCAAGATGCCCTTCTGATATATTGGTGTTCGAAGATGAATTAGAGAAGGGCAGCAATGCCCTTCTTGCTCGAGCGTGGTCTCCCGGTTGGAGCAACGCCGATAAGGCTCTAACCACGTTTATCAATGGGCCGCTAATCGAGTATTCTAAAAATCGACGAAAAGCCGACAGTGCCACAACCTCATTTCTTTCTCCTCACCTGCATTTTGGGGAGGTGAGCGTAAGAAAAGTCTTCCATCTGGTTCGAATCAAGCAGGTTCTCTGGGCAAATGAAGGAAACAAGGCTGGGGAAGAGAGTGTTAACTTATTTCTCAAGTCTATAGGATTAAGGGAGTACTCTAGATACATGAGTTTTAACCATCCATGCAGCCATGAAAGACCTCTTCTTGGGCACCTTAAATTTTTCCCATGGGTTGTGAATGAAGGATACTTCAAGGCATGGAGGCAAGGTAGAACTGGTTATCCGCTGGTGGATGCCGGAATGAGAGAATTGTGGGCTACTGGCTGGTTGCATGATAGAATACGAGTTGTCGTTTCTAGCTTCTTCGTGAAGGTTTTACAGCTTCCATGGCGATGGGGGATGAAGTATTTTTGGGATACTCTCTTAGATGCAGACCTAGAGAGTGATGCTCTTGGTTGGCAGTACATTTCCGGCACTCTCCCTGACGGCCGTGAATTTGACCGCATAGACAATCCACAGTTTGAAGGGTATAAGTTTGATCCAAACGGAGAGTACGTTCGGAGGTGGCTTCCGGAGCTTTCTAGATTACCGACCGAATGGATCCACCACCCATGGAATGCCCCTGGATCGGTCCTTCAAGCAGCTGGGATTGAACTTGGAACGAATTACCCTCTCCCCATTATTGGGATCGATGCAGCGAAAGCCAGGCTGCAAGAAGCTCTATCAGAGATGTGGCAACAAGAAGCAGCTTCGAGGGCTGCCATTGATAACGGCACTGAAGAGGGGCTCGGAGATTCTTCTGAATCGATCCCACTTGATTTTCCTGAAGACACCCAAATGGAGGAAAATCTCGAACCTATTCGAAACAATGGTCATGTAATTAGGTGCTATGAAGATCAAATGGTCCCAAGCTTGACGTCTCTGGTCAGAGTGGAAGAAGAAGAATCTTCTGTAGGCATTCAGAATCCAGCTGAAGAAAGTAGAGCAGAAGTACCCATCAATGGAAACGTACATCCAGAGCCTAGACAAGATGGCTTAAACCAACATTACTCCATGCCAATTGGACTGCGAAATACTATCGAAGATTCTGCCGATTCGTCTACGAGTAGTAGTCGGAGAGAGAGAGATGGGGGTGTAGTTCCGGTTTGGTCTCCAACATCAAGCTACTCGGACCAGTATGTCGTCGATGAAAGTGGGATTGGGACAAGTTCATCTTATTTGCCGAGGCATCCTCAGACTCATCAGTTCATTGGAGGACGATCCTCGTCCAGCTCCGGGAAGGGAAGAAACCATGACAGTTTAATCAAGTACGGTTTCAACCTAGTCAAGGGGAAAGCAAATCACCCCATGGAGGATTATCATGTTGCCAAGTTTGTGCAGCTTGAGAAACATGAGTTAGGGCTGTTTGCTATTTACGACGGCCATTTGGGAGATACTGTGCCTGCTTACTTACAGAAGCATTTATTTTCCAATATTTTAAAAGAGAAAGAATTCTGGAACGACCCTCGTGCATCTATCTTAAAAGCCTATGAGAAGACAGATCAAGCCATTCTCTCGCGTAGCTCTGACTTGGGACGGGGTGGTTCCACTGCCGTAACTGCTATTTTGATCGATGGTCAGAGATTATGGATTGCTAATGTCGGAGATTCACGGGCAGTTATTTCAAGAGCTGGTAAGGCAGAGCAAATGACCATAGATCATGAACCCAGTACAGAACGAGGCAGCATCGAAAACAAAGGCGGTTTTGTCTCAAACATGCCAGGAGATGTCCCTCGAGTCAACGGGCAGCTGGCAGTTTCTCGAGCCTTCGGAGACAAGAGCCTGAAATCTCATTTGCGATCAGACCCGGATATTCGAGATATCAATATCGATGCGAACACAGACGTGTTGATCCTCGCGAGCGATGGTCTTTGGAAGGTAATGACAAATCAAGAAGCAGTCGATATTGCAAGGAGGATCAAAGATCCCCTAAAAGCTGCCCAGCAATTAACTGTGGAAGCATTGAAGAAAGACAGCAAAGATGATATATCCTGCATTGTTGTTAGATGCAGGCGGTTGAAACTAGGTATGGCTGATTCTTCGGAACCCACGGCGACTTGTCCTTCACTACCCATACCAGTTGATCTCTTTCTCTCTAACAAACTCCCAGACCGATTCACTAATTCCTCCGGCGACACCATTTATCGCCTCTCTCCCAAGTCATCCTCTGCTAACGCCAGACTCCTGCTTGATGCTTCCGGCAATCCTCTCATTTCCATCTTTCCCCACCACAAACACTCTTGGCAAGGATTTAAAGGAGATGGAGATGGGAAGGACTTATTGTTTAAGGTGTCCAGAACAGTGAGTAAACTTACAAAAACTGAGTTTAACGCCTTCCTTCCTAGTGAAAACAAAGATGACTCAACATCTTGTTTGAAGATCATCGGTTGGCCTTTTCAGAGATCCTGTACGATTTACAAAGGAGACACCATTATTGCCCAGCGAGGAGAAGTGGAACCAACAGACCATGCTGACTTGAAGAACGCTAAAACCTTGCAAATCAACCTTCATCATCCCAATGAACCAGTTGAAACGGACAAAATGAAGTCAATTACATTCGGTGTGGCGGTTCCTTTCTTGGTTGAGAAGAATTCAAAACTCAATGTCAAAGTGAGCAGCCATGAGAGTCCAGTTGAAGATGCGGCTGAGGTAGAATACGAAGGTGAAGATGAGCATGAAGAAAACTCAATGAAACGGGACTTTTCGGATTTTGATCTTCAAGCCCAGGTCAACTACGTAGAAGAATTTGATTCAGGGAACATACTTGATGAAATAGTTGGCCAAGATGTTGAAAGAAGTGCTGAAGTGATCCAAACCGGACATCTTAGCGACCCTGGAGTTGGAAAGACACAGTTTTGGGAGTCTCCAAAGCTTAAGCGCTCGTGCTCTAATTTAGAAACAAGAGTCATGCTGAGAAATATTGCTGCTGATCTCCCACCTCCTTCAAACACACAGTCTTTCGAAGACCTGCAACGAATAGCTCAGGGAGTGAAAAAGTATGTTGATCCTGGTAGTCCAGGTTCGATATTGACACGCCACAGTGCTGATAGGGTAATGTTGAAGAAGCGATCTTCAAGCCAAATTCTCCCTTCCAGAAGCAGAAGGTTGTGGTGGAAGTTATTCCTTTGGAGCCACAGAAACCTGCACAAACCATGGATAACAAAAACACAGCCATCGCCCGTGAAGGTTGCTTTCAACCAGCAAGGTGGGTACTGTTCAGATACACTAGAACCAAAACAAGATATGGGATTGAACAAGATAGGATCACCTGGATCATTTACAGAAGACTCATGCCAGAACAATAACAGAAGTGACCATCAGAATTGGAACAGTTTTCATAATGGCGTCTCAGGTTTTTGGCCCCAGAATCAATGGGTTGCTTTTTCAACAGAATCATCGTCCTGGGAAAGAGTAAATGAATGGATGAAAGATCTCCAAACCCAGCCCCAACTCTCACTTGATGATGACAACATCGATGAAAACATCTCTCCAACATCACCTCAGGTGGGAAAATCACCAGACAGAGCCTTTACACATTTGAGTTTGCGTCCCGGTGGTGGTCCAGATACCAACCTATCAGAAGAGATTTTGTACGCAAATAATGTCGTCCAGTCTCTGAACACTTCATCAACTGTGGCTCACATCTCTGGAATTGGTTTAAGGGCTATTCCCATAATCTCACATTTCTCAAGTCTTCGATCTGTCAACTTGTCAGGCAATTTCATAGTTCACATTCCTCCAGGATCATTGCCTAAAGGTCTGCATACTCTTAACTTGGCTAGGAACAAGATCAACACCATTGAAGGTCTCAGGGATTTAACAAGGCTGAGGATACTTGACCTCAGTTACAATCGTATATCTCGAATTGGACATGGATTGTCAAATTGTACTGTGATCAAGGAGCTGTATCTCACAGCAAACAAGATTAGTGATGTTGAAGGGCTGCATAGACTCCTGAAGCTCACAGTTTTGGACCTGAGCTTCAACAAAATAACTACAACAAAATCTTTGGGCCAGCTCGTTGCAAACTACAACTCATTGCTAGCTCTAAATCTCTTGGGTAATCCAATCCAAAACAATGTTAGCGAAGACCAGTTGCGGAAGTCAGTATGTGGTCTTCTTCCAAATTTAGTCTACCTGAACAAACAGCCCATCAAAAATCAGAGAGCATGTGAAGCGCGAAGCAATGCTGTTGCCAAAGCTGCGCTAGCAAATACTGGATGGAGTTCTCGTAGAAAATCATCCAAAAAATTGGGCCAAGGTGGATCGTGTTCAACTAGTGGGCACAGAAGTGCAGCCAGTGTTGCACAGAAAGTCAAACACAAGTCAAAAGGCCAGACCCATCGCCACTTGACCCCACGGACACCGTCTTCTGCTTTTGCCTCTTCTTTCCATTAG 5157 45.82 MAGGGCSIVWFRRDLRVEDNPALTAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLGQLDFSLRSLGCNLVTKRSSDSVSALLEVVKSTGATQLFFNHLYDPLSLIRDHRAKGVLTAAGIAVRSFNADLLYEPWDVNDANGHPFSTFAPFWERCLSMPYDPEAPLLPPKRIIPGDVSRCPSDILVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNHPCSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPGSVLQAAGIELGTNYPLPIIGIDAAKARLQEALSEMWQQEAASRAAIDNGTEEGLGDSSESIPLDFPEDTQMEENLEPIRNNGHVIRCYEDQMVPSLTSLVRVEEEESSVGIQNPAEESRAEVPINGNVHPEPRQDGLNQHYSMPIGLRNTIEDSADSSTSSSRRERDGGVVPVWSPTSSYSDQYVVDESGIGTSSSYLPRHPQTHQFIGGRSSSSSGKGRNHDSLIKYGFNLVKGKANHPMEDYHVAKFVQLEKHELGLFAIYDGHLGDTVPAYLQKHLFSNILKEKEFWNDPRASILKAYEKTDQAILSRSSDLGRGGSTAVTAILIDGQRLWIANVGDSRAVISRAGKAEQMTIDHEPSTERGSIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDINIDANTDVLILASDGLWKVMTNQEAVDIARRIKDPLKAAQQLTVEALKKDSKDDISCIVVRCRRLKLGMADSSEPTATCPSLPIPVDLFLSNKLPDRFTNSSGDTIYRLSPKSSSANARLLLDASGNPLISIFPHHKHSWQGFKGDGDGKDLLFKVSRTVSKLTKTEFNAFLPSENKDDSTSCLKIIGWPFQRSCTIYKGDTIIAQRGEVEPTDHADLKNAKTLQINLHHPNEPVETDKMKSITFGVAVPFLVEKNSKLNVKVSSHESPVEDAAEVEYEGEDEHEENSMKRDFSDFDLQAQVNYVEEFDSGNILDEIVGQDVERSAEVIQTGHLSDPGVGKTQFWESPKLKRSCSNLETRVMLRNIAADLPPPSNTQSFEDLQRIAQGVKKYVDPGSPGSILTRHSADRVMLKKRSSSQILPSRSRRLWWKLFLWSHRNLHKPWITKTQPSPVKVAFNQQGGYCSDTLEPKQDMGLNKIGSPGSFTEDSCQNNNRSDHQNWNSFHNGVSGFWPQNQWVAFSTESSSWERVNEWMKDLQTQPQLSLDDDNIDENISPTSPQVGKSPDRAFTHLSLRPGGGPDTNLSEEILYANNVVQSLNTSSTVAHISGIGLRAIPIISHFSSLRSVNLSGNFIVHIPPGSLPKGLHTLNLARNKINTIEGLRDLTRLRILDLSYNRISRIGHGLSNCTVIKELYLTANKISDVEGLHRLLKLTVLDLSFNKITTTKSLGQLVANYNSLLALNLLGNPIQNNVSEDQLRKSVCGLLPNLVYLNKQPIKNQRACEARSNAVAKAALANTGWSSRRKSSKKLGQGGSCSTSGHRSAASVAQKVKHKSKGQTHRHLTPRTPSSAFASSFH 1718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 266677 284297 - BLOR02909 Blo11g00033 66233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00033 1718 MobiDBLite consensus disorder prediction 1703 1718 - -
Blo11g00033 1718 MobiDBLite consensus disorder prediction 1662 1718 - -
Blo11g00033 1718 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 302 502 - -
Blo11g00033 1718 Gene3D - 134 293 - -
Blo11g00033 1718 MobiDBLite consensus disorder prediction 1125 1150 - -
Blo11g00033 1718 Gene3D HUPs 8 206 IPR014729 -
Blo11g00033 1718 ProSiteProfiles PPM-type phosphatase domain profile. 676 923 IPR001932 -
Blo11g00033 1718 MobiDBLite consensus disorder prediction 642 669 - -
Blo11g00033 1718 SMART LRR_typ_2 1482 1505 IPR003591 -
Blo11g00033 1718 SMART LRR_typ_2 1571 1593 IPR003591 -
Blo11g00033 1718 SMART LRR_typ_2 1526 1549 IPR003591 -
Blo11g00033 1718 SUPERFAMILY Tubby C-terminal domain-like 959 1067 IPR025659 -
Blo11g00033 1718 CDD PP2Cc 675 923 IPR001932 -
Blo11g00033 1718 Pfam DNA photolyase 7 163 IPR006050 -
Blo11g00033 1718 Gene3D - 671 928 IPR036457 -
Blo11g00033 1718 PANTHER CRYPTOCHROME-1 1 602 - -
Blo11g00033 1718 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 192 488 IPR036134 -
Blo11g00033 1718 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 5 134 IPR006050 -
Blo11g00033 1718 MobiDBLite consensus disorder prediction 1688 1702 - -
Blo11g00033 1718 Gene3D Ribonuclease Inhibitor 1548 1645 IPR032675 -
Blo11g00033 1718 ProSiteProfiles Leucine-rich repeat profile. 1551 1572 IPR001611 GO:0005515
Blo11g00033 1718 SMART PP2C_4 672 921 IPR001932 -
Blo11g00033 1718 ProSiteProfiles Leucine-rich repeat profile. 1528 1550 IPR001611 GO:0005515
Blo11g00033 1718 MobiDBLite consensus disorder prediction 1406 1427 - -
Blo11g00033 1718 MobiDBLite consensus disorder prediction 600 624 - -
Blo11g00033 1718 MobiDBLite consensus disorder prediction 1662 1686 - -
Blo11g00033 1718 SMART LRR_sd22_2 1571 1592 - -
Blo11g00033 1718 SMART LRR_sd22_2 1504 1525 - -
Blo11g00033 1718 SMART LRR_sd22_2 1526 1548 - -
Blo11g00033 1718 SMART LRR_sd22_2 1549 1570 - -
Blo11g00033 1718 MobiDBLite consensus disorder prediction 554 584 - -
Blo11g00033 1718 Gene3D Ribonuclease Inhibitor 1391 1547 IPR032675 -
Blo11g00033 1718 Pfam Leucine rich repeat 1484 1539 IPR001611 GO:0005515
Blo11g00033 1718 ProSitePatterns DNA photolyases class 1 signature 2. 352 371 IPR018394 -
Blo11g00033 1718 SUPERFAMILY Outer arm dynein light chain 1 1475 1640 - -
Blo11g00033 1718 Pfam LURP-one-related 959 1068 IPR007612 -
Blo11g00033 1718 Gene3D - 943 1107 IPR038595 -
Blo11g00033 1718 ProSiteProfiles Leucine-rich repeat profile. 1573 1594 IPR001611 GO:0005515
Blo11g00033 1718 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 178 IPR036155 -
Blo11g00033 1718 MobiDBLite consensus disorder prediction 1406 1425 - -
Blo11g00033 1718 SMART PP2C_SIG_2 687 923 IPR001932 -
Blo11g00033 1718 ProSitePatterns DNA photolyases class 1 signature 1. 332 344 IPR018394 -
Blo11g00033 1718 TIGRFAM crypt_chrom_pln: cryptochrome, plant family 6 482 IPR014134 GO:0009785|GO:0009882
Blo11g00033 1718 PRINTS DNA photolyase signature 143 159 IPR002081 -
Blo11g00033 1718 PRINTS DNA photolyase signature 332 348 IPR002081 -
Blo11g00033 1718 PRINTS DNA photolyase signature 391 405 IPR002081 -
Blo11g00033 1718 PRINTS DNA photolyase signature 352 370 IPR002081 -
Blo11g00033 1718 Coils Coil 470 490 - -
Blo11g00033 1718 Pfam FAD binding domain of DNA photolyase 283 481 IPR005101 -
Blo11g00033 1718 ProSiteProfiles Leucine-rich repeat profile. 1506 1527 IPR001611 GO:0005515
Blo11g00033 1718 Pfam Blue/Ultraviolet sensing protein C terminal 511 591 IPR020978 -
Blo11g00033 1718 PANTHER CRYPTOCHROME 1 602 IPR002081 -
Blo11g00033 1718 SUPERFAMILY PP2C-like 674 924 IPR036457 -
Blo11g00033 1718 Pfam Protein phosphatase 2C 685 916 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00036 Blo-Chr9:503286 Blo11g00033 Blo-Chr11:266677 9.50E-53 dispersed
Blo09g00294 Blo-Chr9:12568189 Blo11g00033 Blo-Chr11:266677 2.92E-14 dispersed
Blo11g00033 Blo-Chr11:266677 Blo12g01039 Blo-Chr12:28238832 6.17E-60 dispersed
Blo12g01097 Blo-Chr12:28672687 Blo11g00033 Blo-Chr11:266677 1.81E-15 dispersed
Blo01g00523 Blo-Chr1:5756418 Blo11g00033 Blo-Chr11:266677 4.00E-10 transposed
Blo01g00922 Blo-Chr1:20921056 Blo11g00033 Blo-Chr11:266677 2.61E-06 transposed
Blo02g00740 Blo-Chr2:24320959 Blo11g00033 Blo-Chr11:266677 3.74E-64 transposed
Blo03g00677 Blo-Chr3:28471536 Blo11g00033 Blo-Chr11:266677 1.04E-88 transposed
Blo03g01193 Blo-Chr3:38146960 Blo11g00033 Blo-Chr11:266677 1.66E-79 transposed
Blo04g00670 Blo-Chr4:6032674 Blo11g00033 Blo-Chr11:266677 6.68E-68 transposed
Blo07g00262 Blo-Chr7:3167194 Blo11g00033 Blo-Chr11:266677 0 transposed
Blo14g00764 Blo-Chr14:22841536 Blo11g00033 Blo-Chr11:266677 6.52E-100 transposed
Blo15g00788 Blo-Chr15:26878457 Blo11g00033 Blo-Chr11:266677 1.51E-130 transposed
Blo11g00033 Blo-Chr11:266677 Blo12g00706 Blo-Chr12:25346899 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00033 K12118 - rcu:8281647 1139.79