Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00048 ATGGGAAACCCAAGTAGGACATGTCATCGGGGCAAGACGACATGCCAGAATGGACCGACTTTGGCCCCCTTCTTCTTTCCTTTCTTTCCACCCATCCATCGTCGTCGTGGTGGTGCAAAGTCGGAGATAAAGAGAACAGCAAGCAAGAAAAAGAGACAGGTGATCTTCTCAAAGCGCAAAAGTGAACTCATAAAGAAGGCTTACGAGCTTTCTGTCCTCTGCGACATTGATATTTCTCTCATCATCTTCTCCCCTTCCGACCAACTCTTTCATTTCTCCGGCAAACGGTCAAAAATAATATCTTTTTCGGTAAACAGAGACACGACTATTGAAGAACGGAGGGATTTTCTTGAAGGTGTCATCTTTTCAGTTTTCACCCACTACGAACGGCTTCCAGCCGAGGCATATGAGGGGTTATTCATCGGGGTGGAGGAACTTGAGACGAAAGAGATGGTTAGTAGAAGTTTATCGTCTTCCTGCAATCAAGCACAGGACGAGACATTCATTCACAAAGTGGGGATTCCTCCAAAGCAGAACCTTTTTAAGGAATTCAAGAACAACTTGAAAGAAACATTTTTTGCAGACGATCCTCTTCGATCTTTTAAAGATCAGTCCAAGTCTCGGAAACTAATTCTAGGCTTTCAAGCTGTTTTTCCCATTCTCGAGTGGGGAAGAAGCTATAATTTAAGTAAATTTAGCGGGGATCTTATAGCTGGACTCACCATTGCAAGTCTCTGCATTCCTCAGATTCACAATCAACAATCAATAAATATGAAAGGGCAGCAGAAATCTAAAAAATTGGTCCTTTTTCTGTCTAAACAGGATATTGGATATGCTAAGCTGGCCAATTTGGCTCCTCACTATGGCCTGTACTCAAGCTTTGTTCCACCATTGATATATGCCGTTATGGGTAGCTCAAGAGATATAGTCATTGGACCTGTGTCTGTCGTTTCTCTCTTGTTAGGGACCCTTCTTCAAAATGAGATCGATCATGTCACCAACGCACCGGAGTACTTACGACTAGCATTTACTGCTACTTTTTTCGCCGGAATAACTCAAGCATCCCTCGGAATTTTGAGGCTAGGCTTCTTGATTGACTTTTTATCTCATGCTGCCATTGTTGGATTTATGGGTGGAGCTGCCATTAGCATTTCTCTTCAGCAGCTCAAGGGATTTCTTGGAATAAGAAAATTCACGAAGAAAACAGATATAATCTCTTGGAACTGGCAGACTATAGTCATTGGAGCAAGCTTTCTAAGTTTTCTTCTGCTTACTAAACACATTGGAAAGAGAAACAAGAAACTTTTCTGGGTACCTGCAATTTCGCCTCTGATATCTGTCGTTTTATCCACCCTTTTCGTTTACCTTACTCATGCAGAAAATAAAGGGGTTGAAATTGTGAAACATGTAGAGAAAGGAATCAATCCACCATCAGTTCATCAAATATTTTTTACGGGTGAATACCTCGCCAAAGGTTTTAGGATTGGCGTTGTTGCCGGAATGATAGCTCTAACGGAAGCCACTGCAATAGGAAGAACATTCGCTTCTATGAAAGACTACAAACTCGACGGGAACAAAGAAATGGTTGCACTAGGAACCATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTGGCGACAGGTTCATTTTCTCGGTCAGCTGTGAATTACATGGTGGGATGTCAAACGGCAGTTTCTAACATTGTGATGTCTATTGTTGTGTTCATAACTTTGGAGTTTATCACCCCTCTTTTAAAATACACTCCAAATGCCATTCTTTCTGCCATTATTATCTCAGCTGTGATCAACCTAATCGACATTCAGGCTGCAATTTTGATATGGAAGATCGACAAATTGGATTTCGTCACTTGCATCGGAGCCTTCTTTGGTGTTGTTTTTGCCAATGTCGAAATAGGCCTTGTCTCTATATCCTTTGCCAAAATCCTCTTACAAGTCACGAGGCCAAGAATTGCCCTTCTCGGAAGAATCCCTCGGACGACAGTTTACAGAAATATCCAACAGTACCCAGATGCAACTAAGATGCCTGGCGTTTTGATTGTTCGCGTTGATTCTGCAATGTACTTTACCAACTCCAATTACACCAAAGAAAGGATACTGAGATGGTTGACAGATGAAGAAGAACAAATAAAGAAGTCTTACCTACCCAAAATCCAGTTTTTGATAGTCGAAATGTCACCTGTTACTGACATTGACACCAGCGGAATTCATGCTTTGGAAGAGCTATATAGGAGCCTCCAAAAGAGCGATGTTCAGCTTTTTCTGGCAAATCCTGGGCCGGTGGTGATAGACAAGCTTCACACATCCGATTTTGAGAATTTGATTGGCGAGAACAACATCTTCCTCACCGTTGCAGAAGCTGTCTCCGCCTGTTCGCTGAAATTGGTTGAAGAAGCTTGA 2418 42.14 MGNPSRTCHRGKTTCQNGPTLAPFFFPFFPPIHRRRGGAKSEIKRTASKKKRQVIFSKRKSELIKKAYELSVLCDIDISLIIFSPSDQLFHFSGKRSKIISFSVNRDTTIEERRDFLEGVIFSVFTHYERLPAEAYEGLFIGVEELETKEMVSRSLSSSCNQAQDETFIHKVGIPPKQNLFKEFKNNLKETFFADDPLRSFKDQSKSRKLILGFQAVFPILEWGRSYNLSKFSGDLIAGLTIASLCIPQIHNQQSINMKGQQKSKKLVLFLSKQDIGYAKLANLAPHYGLYSSFVPPLIYAVMGSSRDIVIGPVSVVSLLLGTLLQNEIDHVTNAPEYLRLAFTATFFAGITQASLGILRLGFLIDFLSHAAIVGFMGGAAISISLQQLKGFLGIRKFTKKTDIISWNWQTIVIGASFLSFLLLTKHIGKRNKKLFWVPAISPLISVVLSTLFVYLTHAENKGVEIVKHVEKGINPPSVHQIFFTGEYLAKGFRIGVVAGMIALTEATAIGRTFASMKDYKLDGNKEMVALGTMNVVGSMTSCYVATGSFSRSAVNYMVGCQTAVSNIVMSIVVFITLEFITPLLKYTPNAILSAIIISAVINLIDIQAAILIWKIDKLDFVTCIGAFFGVVFANVEIGLVSISFAKILLQVTRPRIALLGRIPRTTVYRNIQQYPDATKMPGVLIVRVDSAMYFTNSNYTKERILRWLTDEEEQIKKSYLPKIQFLIVEMSPVTDIDTSGIHALEELYRSLQKSDVQLFLANPGPVVIDKLHTSDFENLIGENNIFLTVAEAVSACSLKLVEEA 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 383082 388158 - BLOR02924 Blo11g00048 66248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00048 805 CDD STAS_SulP_like_sulfate_transporter 675 790 - -
Blo11g00048 805 CDD MADS 40 93 - -
Blo11g00048 805 PRINTS MADS domain signature 73 94 IPR002100 GO:0003677|GO:0046983
Blo11g00048 805 PRINTS MADS domain signature 38 58 IPR002100 GO:0003677|GO:0046983
Blo11g00048 805 PRINTS MADS domain signature 58 73 IPR002100 GO:0003677|GO:0046983
Blo11g00048 805 ProSiteProfiles STAS domain profile. 674 797 IPR002645 -
Blo11g00048 805 PANTHER SULFATE TRANSPORTER 273 804 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo11g00048 805 TIGRFAM sulP: sulfate permease 274 793 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo11g00048 805 Gene3D STAS domain 654 800 IPR036513 -
Blo11g00048 805 SMART madsneu2 36 95 IPR002100 GO:0003677|GO:0046983
Blo11g00048 805 PANTHER SULFATE TRANSPORTER 1.3 273 804 - -
Blo11g00048 805 PANTHER SULFATE TRANSPORTER 1.3 153 250 - -
Blo11g00048 805 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 47 92 IPR002100 GO:0003677|GO:0046983
Blo11g00048 805 Pfam Sulfate permease family 274 625 IPR011547 GO:0016021
Blo11g00048 805 Gene3D - 48 119 IPR036879 GO:0003677|GO:0046983
Blo11g00048 805 ProSiteProfiles MADS-box domain profile. 36 96 IPR002100 GO:0003677|GO:0046983
Blo11g00048 805 ProSitePatterns SLC26A transporters signature. 286 307 IPR018045 GO:0008271|GO:0008272
Blo11g00048 805 Pfam STAS domain 675 793 IPR002645 -
Blo11g00048 805 PANTHER SULFATE TRANSPORTER 153 250 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo11g00048 805 SUPERFAMILY SRF-like 39 96 IPR036879 GO:0003677|GO:0046983
Blo11g00048 805 SUPERFAMILY SpoIIaa-like 676 797 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00048 Blo-Chr11:383082 Blo12g00695 Blo-Chr12:25205369 6.52E-16 dispersed
Blo11g00047 Blo-Chr11:377552 Blo11g00048 Blo-Chr11:383082 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12872 PF00916 Sulfate_transp 2.90E-111 CL0062 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00048 K17470 - jre:108997232 991.104