Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00051 ATGGGCTTGTACGAGCCGTTTCGCAAGGTATGCGCATGGGAAAATACGTTCATAACTCAAGAAAACTCCGACACAGATGGATCCGCCATTGTTAAGGTCGATGCCGAGCTCAACAACAGACCTGATATGAGAAGTGATCAAGAAGCAAATGATGAGACTGTCGATAAGGCGTACGTTCAACAGCTAGAAACAAGTTGTTTGAGGCTGGCACAACTAGAGCAAGAACTATACAATCCTAGACAACAGGATGCGTATTTTAGCTACGGAATCGATTCGAGCCACTTGGGATTAAATCCAGGATTTGAGATGGAATATGGTCAGTGGGTGGATGAGCAGCAAAGACAGAGTAGTGAGCTTAGAAATGCATTACAATCTCATGCAACTGAGATGGAGCTTCGTATTCTCGTCGATGGTAATCTAAATCATTATCGCAGCCTTCTTCGCATGAAAGCCGTCGCTGCCAAGACCGACGTCATCTACATAATGTCCGGAATATGGAGATCATCGGCCGAACGATTTTTCTCATGGATCGGCGGATCTCGCCCCTCGGAGCTCTTAAACGTTCTAATGCTGCATTTTGGGCCATTAAACGACGAGCAAGAGACGAATATTCGTAATCTTCGAGTCTCGTCTCAGCAAGCCGAAGACGCTCTTTTGCAAGGGATGGAAAAACTGCATCAGAATCTCGTCCAAGGAATCGCCAGCGTCCCGACCAGTGCAGAGAGTTACGGCAGTCAAATGGCGGGTGCGATAGATAAATTGCTAGCTCTGGAGACCCTTTTGATCCAAGCGGACCACCTTCGGGAAGAGATGTTGCTGCAAATGTATAGCATTCTGTCGATCAAGCAAGCCGCTCAAGGGCTGGTGGGATTAGCAGAGTACTTCCGGCGCCTTCGGGTTCTCAGTTCGCTCTGGTCTACTCGGCCAAGCAATTTTAGGGAAATAATTGTGAGAGTTGTCCGACCGACTAATGAAACTTCTCCTCCGTCGCCGTCGGGGATCAGCTGGCTAATTCCGGGGAAAATGGGGTTGCTCATAGATGAAGAGAAGAGGAGTCAATATGATATAGATAATCGAGTTAACCCAATGAAGGCTTCTCAAGCATGGATGGAGTGGCTTATAAAAAAGCGAAAAGCTTTTGATCAGCGTGGTGATATGGCGATAGCAGCTTGGGCAGAACAGCAGCAGCGTGAGTTACATCTCCGCGTTCGGCGCCTTTCTCGATCAAAGATTGATCCCGATGAAGAGAGAAGAATCCTAGCAAAGGAGAAAAAGGCGTCAGCGGAGTATTTCAACAGTACGCTTAAGAGGCACACACTTATCCTAAAGAAGAGGGACTTGATGAGGAGGAAAGCAGAGGAAGACAAGAAGGTTATAAGTCAGCTATTAGCTGCAGAGGGACTCGAGCTGGATCCAGACGATGAGGAAGTCTCCTGA 1437 47.6 MGLYEPFRKVCAWENTFITQENSDTDGSAIVKVDAELNNRPDMRSDQEANDETVDKAYVQQLETSCLRLAQLEQELYNPRQQDAYFSYGIDSSHLGLNPGFEMEYGQWVDEQQRQSSELRNALQSHATEMELRILVDGNLNHYRSLLRMKAVAAKTDVIYIMSGIWRSSAERFFSWIGGSRPSELLNVLMLHFGPLNDEQETNIRNLRVSSQQAEDALLQGMEKLHQNLVQGIASVPTSAESYGSQMAGAIDKLLALETLLIQADHLREEMLLQMYSILSIKQAAQGLVGLAEYFRRLRVLSSLWSTRPSNFREIIVRVVRPTNETSPPSPSGISWLIPGKMGLLIDEEKRSQYDIDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQRELHLRVRRLSRSKIDPDEERRILAKEKKASAEYFNSTLKRHTLILKKRDLMRRKAEEDKKVISQLLAAEGLELDPDDEEVS 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 410168 414168 + BLOR02927 Blo11g00051 66251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00051 478 Coils Coil 197 217 - -
Blo11g00051 478 ProSiteProfiles DOG1 domain profile. 98 308 IPR025422 GO:0006351|GO:0043565
Blo11g00051 478 PANTHER TRANSCRIPTION FACTOR TGA9 45 310 - -
Blo11g00051 478 Coils Coil 109 129 - -
Blo11g00051 478 Pfam Seed dormancy control 117 190 IPR025422 GO:0006351|GO:0043565
Blo11g00051 478 PANTHER TRANSCRIPTION FACTOR TGA7 45 310 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00051 Blo-Chr11:410168 Blo04g00388 Blo-Chr4:3123559 7.87E-69 dispersed
Blo05g00686 Blo-Chr5:22986529 Blo11g00051 Blo-Chr11:410168 2.87E-36 transposed
Blo11g00051 Blo-Chr11:410168 Blo17g00209 Blo-Chr17:2111317 1.71E-84 wgd
Blo11g00051 Blo-Chr11:410168 Blo18g00208 Blo-Chr18:2044278 2.87E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00051 K14431 - vvi:100255706 327.405