Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo11g00062 | ATGTCTGCAACAATGGCGAAGGCTAGAAACCAGAGAAAGTCCAAGAAGAAAGTGCAAGAAAATCTAAATTACCAACCACAGAAGACGGAAAAACCACCACCTTGGTCAGTGGTAAGGGGCCTGTTGAGCTGTAGATATCTCCAACCTCATCAACAGCCTCTGCAAGTGGCGAGACAAGAGCAGCAGAAGCTTAAACCAGACAAACCCATCGAGGATAACGTCAAGAAATGCAAGAAAATGAGATGGTCCAGTTCACTTTGCAGCAACACGAAGATGATGCAGAGACCGGATCAAACTGGGTTTCCTCAAGTCCATGAGAAAAGGACTTCCTTCAGCGTAGGAAAAGATGAATACTCTTCGAGCAGATCCATGAAAGCTCCTCTGCGTGAACTAAATGGGGTTGTGATTTCTACTTCTTATCTATCAGCATCCTCAAACTCGTCCAATGGCGGTGCTTCTAGATCGGGGAAGTCTTTCCGGAAGTTCTACGGCTGTTATGAATGTAAGATGGTCGTTAATCCTGTTCTTGGAATCACCAGAGATCCTTCTCTCAGGGCTAGCATTTTTCCTTGCCCTGAATGCGGGGAAATCTTCATCAAATCTGAAAGTTTGGAGCTTCATCAATCCACTAGCCATGCAGTTTCCGAACTGGGTGCTGAGGATACAAGCAGAAACATAGTGGAAATCATATTCCAGTCAAGCTGGCAACAGAAACAAGCTCCCATTTGCACAGTCGACCGTATACTAAAAGTCCACAACACCCAGAAGACCATCTGCAGATTCGAAGAGTACAGAGACGCCATAAAAGCCAAATCAGCGAAGCTTCCAAAGAAGTACCCACGTTGCATAGCAGACGGCAATGAGCTACTCAGATTCCACTCAACCACCGTGGCCTGCGCACTAGGAGAAAACGGTTCTTCAAATCTCTGCAACGCATTTAAGGAGTGCAACGTCTGTAGCATCATAAAGAGCGGCTTCAAAGTTTCCACCGGAGAACAGCCAGAAAAGGGAGTTCTGACCACGGCGACGAGTGGGAAAGCCCATGACAGTGCAGGAGATTGTCCGAACGGCAATGGGCGGAGGGCGATGCTGGTTTGCCGGGTGATCGCGGGGAGAGTAAGGAAGGGCTTGGAGATGAGTTCGGACGAGTACGATTCAGTTGGGGGAGCAGTGGAAGTGTATTCCAATCTGGAAGAGTTGCGTGTATTCGATCCAAACGCTATTTTGCCTTGTTTTGTTGTCATTTATGGAGGATTTCAGTGA | 1263 | 47.43 | MSATMAKARNQRKSKKKVQENLNYQPQKTEKPPPWSVVRGLLSCRYLQPHQQPLQVARQEQQKLKPDKPIEDNVKKCKKMRWSSSLCSNTKMMQRPDQTGFPQVHEKRTSFSVGKDEYSSSRSMKAPLRELNGVVISTSYLSASSNSSNGGASRSGKSFRKFYGCYECKMVVNPVLGITRDPSLRASIFPCPECGEIFIKSESLELHQSTSHAVSELGAEDTSRNIVEIIFQSSWQQKQAPICTVDRILKVHNTQKTICRFEEYRDAIKAKSAKLPKKYPRCIADGNELLRFHSTTVACALGENGSSNLCNAFKECNVCSIIKSGFKVSTGEQPEKGVLTTATSGKAHDSAGDCPNGNGRRAMLVCRVIAGRVRKGLEMSSDEYDSVGGAVEVYSNLEELRVFDPNAILPCFVVIYGGFQ | 420 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 482278 | 483610 | + | BLOR02938 | Blo11g00062 | 66262 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo11g00062 | 420 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Blo11g00062 | 420 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 189 | 217 | IPR013087 | - | |
| Blo11g00062 | 420 | SUPERFAMILY | ADP-ribosylation | 214 | 418 | - | - | |
| Blo11g00062 | 420 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 35 | 416 | - | - | |
| Blo11g00062 | 420 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 191 | 212 | IPR013087 | - | |
| Blo11g00062 | 420 | Gene3D | - | 213 | 417 | - | - | |
| Blo11g00062 | 420 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 35 | 416 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo10g00801 | Blo-Chr10:25382475 | Blo11g00062 | Blo-Chr11:482278 | 4.60E-71 | dispersed | |
| Blo11g00062 | Blo-Chr11:482278 | Blo17g00187 | Blo-Chr17:1909693 | 5.96E-126 | dispersed | |
| Blo03g00414 | Blo-Chr3:11874376 | Blo11g00062 | Blo-Chr11:482278 | 3.55E-36 | transposed | |
| Blo03g01167 | Blo-Chr3:38026367 | Blo11g00062 | Blo-Chr11:482278 | 3.04E-64 | transposed | |
| Blo19g00233 | Blo-Chr19:11583379 | Blo11g00062 | Blo-Chr11:482278 | 5.99E-35 | transposed | |
| Blo11g00062 | Blo-Chr11:482278 | Blo12g00683 | Blo-Chr12:25082669 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 12873 | None | None | None | None | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo11g00062 | - | - | zju:107421015 | 548.895 |