Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00062 ATGTCTGCAACAATGGCGAAGGCTAGAAACCAGAGAAAGTCCAAGAAGAAAGTGCAAGAAAATCTAAATTACCAACCACAGAAGACGGAAAAACCACCACCTTGGTCAGTGGTAAGGGGCCTGTTGAGCTGTAGATATCTCCAACCTCATCAACAGCCTCTGCAAGTGGCGAGACAAGAGCAGCAGAAGCTTAAACCAGACAAACCCATCGAGGATAACGTCAAGAAATGCAAGAAAATGAGATGGTCCAGTTCACTTTGCAGCAACACGAAGATGATGCAGAGACCGGATCAAACTGGGTTTCCTCAAGTCCATGAGAAAAGGACTTCCTTCAGCGTAGGAAAAGATGAATACTCTTCGAGCAGATCCATGAAAGCTCCTCTGCGTGAACTAAATGGGGTTGTGATTTCTACTTCTTATCTATCAGCATCCTCAAACTCGTCCAATGGCGGTGCTTCTAGATCGGGGAAGTCTTTCCGGAAGTTCTACGGCTGTTATGAATGTAAGATGGTCGTTAATCCTGTTCTTGGAATCACCAGAGATCCTTCTCTCAGGGCTAGCATTTTTCCTTGCCCTGAATGCGGGGAAATCTTCATCAAATCTGAAAGTTTGGAGCTTCATCAATCCACTAGCCATGCAGTTTCCGAACTGGGTGCTGAGGATACAAGCAGAAACATAGTGGAAATCATATTCCAGTCAAGCTGGCAACAGAAACAAGCTCCCATTTGCACAGTCGACCGTATACTAAAAGTCCACAACACCCAGAAGACCATCTGCAGATTCGAAGAGTACAGAGACGCCATAAAAGCCAAATCAGCGAAGCTTCCAAAGAAGTACCCACGTTGCATAGCAGACGGCAATGAGCTACTCAGATTCCACTCAACCACCGTGGCCTGCGCACTAGGAGAAAACGGTTCTTCAAATCTCTGCAACGCATTTAAGGAGTGCAACGTCTGTAGCATCATAAAGAGCGGCTTCAAAGTTTCCACCGGAGAACAGCCAGAAAAGGGAGTTCTGACCACGGCGACGAGTGGGAAAGCCCATGACAGTGCAGGAGATTGTCCGAACGGCAATGGGCGGAGGGCGATGCTGGTTTGCCGGGTGATCGCGGGGAGAGTAAGGAAGGGCTTGGAGATGAGTTCGGACGAGTACGATTCAGTTGGGGGAGCAGTGGAAGTGTATTCCAATCTGGAAGAGTTGCGTGTATTCGATCCAAACGCTATTTTGCCTTGTTTTGTTGTCATTTATGGAGGATTTCAGTGA 1263 47.43 MSATMAKARNQRKSKKKVQENLNYQPQKTEKPPPWSVVRGLLSCRYLQPHQQPLQVARQEQQKLKPDKPIEDNVKKCKKMRWSSSLCSNTKMMQRPDQTGFPQVHEKRTSFSVGKDEYSSSRSMKAPLRELNGVVISTSYLSASSNSSNGGASRSGKSFRKFYGCYECKMVVNPVLGITRDPSLRASIFPCPECGEIFIKSESLELHQSTSHAVSELGAEDTSRNIVEIIFQSSWQQKQAPICTVDRILKVHNTQKTICRFEEYRDAIKAKSAKLPKKYPRCIADGNELLRFHSTTVACALGENGSSNLCNAFKECNVCSIIKSGFKVSTGEQPEKGVLTTATSGKAHDSAGDCPNGNGRRAMLVCRVIAGRVRKGLEMSSDEYDSVGGAVEVYSNLEELRVFDPNAILPCFVVIYGGFQ 420
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 482278 483610 + BLOR02938 Blo11g00062 66262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00062 420 MobiDBLite consensus disorder prediction 1 35 - -
Blo11g00062 420 ProSiteProfiles Zinc finger C2H2 type domain profile. 189 217 IPR013087 -
Blo11g00062 420 SUPERFAMILY ADP-ribosylation 214 418 - -
Blo11g00062 420 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 416 - -
Blo11g00062 420 ProSitePatterns Zinc finger C2H2 type domain signature. 191 212 IPR013087 -
Blo11g00062 420 Gene3D - 213 417 - -
Blo11g00062 420 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 416 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00801 Blo-Chr10:25382475 Blo11g00062 Blo-Chr11:482278 4.60E-71 dispersed
Blo11g00062 Blo-Chr11:482278 Blo17g00187 Blo-Chr17:1909693 5.96E-126 dispersed
Blo03g00414 Blo-Chr3:11874376 Blo11g00062 Blo-Chr11:482278 3.55E-36 transposed
Blo03g01167 Blo-Chr3:38026367 Blo11g00062 Blo-Chr11:482278 3.04E-64 transposed
Blo19g00233 Blo-Chr19:11583379 Blo11g00062 Blo-Chr11:482278 5.99E-35 transposed
Blo11g00062 Blo-Chr11:482278 Blo12g00683 Blo-Chr12:25082669 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12873 None None None None Blo TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00062 - - zju:107421015 548.895