Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00079 ATGGGTAAAGACTCTATCCCGGCAACTGAACCCCTAGATAAGTCAAAAGTCTTGGACGTAAAACCATTGCGCTGTCTGGTTCCAGTATTTCCCTCAGCAAATAATGTTTCTACTTCAACGCCAAATTCTCTAGGCGGAGCTCCATTTGTTTGTGCCAGCCCATCTGGTCCTTTTCCACCAGGGATTGCGCCGTTCTACCCTTTCTTCTTTTCTCCAGAACTAAAACAACAGCACCAGGCTGATACAACAAACCAAAGCAACACGCCCTTAGGCTTCAACAGTCCTATATCAAATGCAGTTCCAATATCTTCATTTAGGACTCCGATTTCTCCTCCTGAAGAAACTCCAACTCGATATAGGGCTGCTGCGAATGGAGGCACAGGCTCATCGAGAAGAAGAAGAATTGGTGAGGAATATACTACTGCTCCACCTGATTCAGACTTAGACTCAATACTGAATAGGATGCTGACCTCCTGCAATATCGCATCATTTGACCCTGTTCGGCGATCCAATGGTGATAGGGAAACAGTACGTTTGGTCCTTACGTTGTGTGATATGCTGAGGTGGAAGATTGCACAGCTTGAAGAGTCAAAGGAAGCTATTCCAGGAGTCGCAAAACGTCCTGATTTGAAAGCAGCTGCAGTCCTCATGAGCAAAGGTATACGAACAAATACCAACAAAAGAATCGGGACTGTTCCGGGAGTTGAGATCGGGGATATCTTCTTTTTTAGAATGGAAATGTGTTTGGTTGGATTACATTCTCCATCTATGGCTGGAATTGATTACTTGACTTTGAAGAATAGCAATGATGACGACCCATTGGCTGTGAGCATTGTTTCTTCAGGTGGTTATGAAGATGACAATGAGGATGCAAATGTGCTCATTTACAGCGGTCAAGGAGGGGTTAACAGAAAAGATAAGGAAATGAAGGATCAGAAACTTGAAAGGGGAAATCTTGCTCTGGAGAAAAGCTTGCATCGGGGAAACGATGTTAGAGTTATTCGTGGGCTAAGTGATATATCCAATCCGACAAGAAAAATTTACGTGTATGATGGTCTTTATAAAATCCAGGAATCTTGGATAGAGAAAGGGAAGTCGGGTTGCAATGTTTTCAAGTATAAATTGGTCAGATTACCTGGCCAAGCAGATGGATTTATGACATGGAAAATGTCTCAACAATGGAAGGAAGGAACTGTTTCTAGGATTGGTGTTATTTTGTCAGATCTTACTTCAGGTGCTGAAAATATTCCTGTCTCTCTTGTAAATGATGTCGATGATGAGAAGGGCCCTGCATATTTCACGTATTATCCCGGTCTAAAGTATTCTAAATCATTGAACATCACAGAACCTTCAAATGGCTGTAATTGCACTGGTGGTTGTCTCCCAACCTATTCCAACTGTTCCTGTATACAGAAAAATGGAGGAAACCTTCCCTATTCTGCAAATGGGCTCCTTTTGAGCCAAAAATCATTGATTAATGAATGTGGTCCTTTGTGTTGCTGTCCTCCTAATTGCCGAAACCGCGTGACTCAAGGGGGTCTAAAATTTTGTTTGGAAGTATTTAGAACTAAAGATAAAGGCTGGGGATTAAGGTCTTGGGATGCAATTCGAGCTGGTGCCTTTATTTGTGAATATGCTGGGGAAGTCATTGGCACTGGGAATGAAAAAAAGTCTGTAAGGGATGATGACGATGAATACGTCTTTGATACTAATCGTACTTATAAAACAATCGAAGGTCTTTGTGAGTCGAACGATTCTTCCTCAATCCCAACGCCACTAATTATAAGCGCAAAAAATGCTGGGAATGTAGCTAGGTTCATGAATCACAGTTGCTCTCCCAATATACGCTGGAAGCCAGTCGTTCGGGAAAACAAAAGTGAGTGTGATTTACACGTGGTCTTCTATGCAGTCAGGCATGTACCCCCCATGACTGAGCTGACATATGATTATGGAATGATCACCTCTAAAAAGGCTGATGGAAGGAAGAAAAAGTGCTTATGTGGATCTCTCAAGTGCAGAGGATTTTTCTATTGA 2034 42.28 MGKDSIPATEPLDKSKVLDVKPLRCLVPVFPSANNVSTSTPNSLGGAPFVCASPSGPFPPGIAPFYPFFFSPELKQQHQADTTNQSNTPLGFNSPISNAVPISSFRTPISPPEETPTRYRAAANGGTGSSRRRRIGEEYTTAPPDSDLDSILNRMLTSCNIASFDPVRRSNGDRETVRLVLTLCDMLRWKIAQLEESKEAIPGVAKRPDLKAAAVLMSKGIRTNTNKRIGTVPGVEIGDIFFFRMEMCLVGLHSPSMAGIDYLTLKNSNDDDPLAVSIVSSGGYEDDNEDANVLIYSGQGGVNRKDKEMKDQKLERGNLALEKSLHRGNDVRVIRGLSDISNPTRKIYVYDGLYKIQESWIEKGKSGCNVFKYKLVRLPGQADGFMTWKMSQQWKEGTVSRIGVILSDLTSGAENIPVSLVNDVDDEKGPAYFTYYPGLKYSKSLNITEPSNGCNCTGGCLPTYSNCSCIQKNGGNLPYSANGLLLSQKSLINECGPLCCCPPNCRNRVTQGGLKFCLEVFRTKDKGWGLRSWDAIRAGAFICEYAGEVIGTGNEKKSVRDDDDEYVFDTNRTYKTIEGLCESNDSSSIPTPLIISAKNAGNVARFMNHSCSPNIRWKPVVRENKSECDLHVVFYAVRHVPPMTELTYDYGMITSKKADGRKKKCLCGSLKCRGFFY 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 598416 600611 + BLOR02955 Blo11g00079 66279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00079 677 Pfam SET domain 527 651 IPR001214 GO:0005515
Blo11g00079 677 Pfam Pre-SET motif 410 508 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Blo11g00079 677 ProSiteProfiles Pre-SET domain profile. 452 513 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Blo11g00079 677 MobiDBLite consensus disorder prediction 103 146 - -
Blo11g00079 677 Gene3D SET domain 399 677 IPR046341 -
Blo11g00079 677 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 88 677 IPR025794 GO:0016571
Blo11g00079 677 SMART G9a_1 225 381 IPR003105 -
Blo11g00079 677 SUPERFAMILY PUA domain-like 212 399 IPR015947 -
Blo11g00079 677 ProSiteProfiles Post-SET domain profile. 661 677 IPR003616 -
Blo11g00079 677 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 132 676 - -
Blo11g00079 677 ProSiteProfiles SET domain profile. 516 651 IPR001214 GO:0005515
Blo11g00079 677 Pfam SAD/SRA domain 229 381 IPR003105 -
Blo11g00079 677 SUPERFAMILY SET domain 415 674 IPR046341 -
Blo11g00079 677 SMART preset_2 406 500 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Blo11g00079 677 ProSiteProfiles YDG domain profile. 230 377 IPR003105 -
Blo11g00079 677 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 9 134 - -
Blo11g00079 677 SMART set_7 516 657 IPR001214 GO:0005515
Blo11g00079 677 Gene3D - 212 398 IPR036987 -
Blo11g00079 677 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 9 134 - -
Blo11g00079 677 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 132 676 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00138 Blo-Chr3:3884984 Blo11g00079 Blo-Chr11:598416 1.65E-116 dispersed
Blo05g00606 Blo-Chr5:15893452 Blo11g00079 Blo-Chr11:598416 3.35E-27 dispersed
Blo11g00079 Blo-Chr11:598416 Blo17g00555 Blo-Chr17:9965473 3.26E-94 dispersed
Blo02g00682 Blo-Chr2:19776486 Blo11g00079 Blo-Chr11:598416 6.75E-122 transposed
Blo11g00079 Blo-Chr11:598416 Blo12g00659 Blo-Chr12:24912375 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12875 PF02182 SAD_SRA 2.90E-51 CL0178 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00079 K24405 - csv:101218938 905.205