Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00122 ATGCAGTCTAATAACTCAGAGCTTTACAGGTCCACGCCGGGACGACATGGTTTTCAGTCTCTGCAAAGCTTTTGCAGTTCTTCTTCGTATTACCCTCTTCCTGTTTCTGCAATTTCAGACACCACTCATTCTCAATCTCCCCATGAGCGAGCTGTTGCTGCTCTTAGGAATCACAAGGAGGCTGAGAGGAGGAGGAGAGAGAAGATCAACTCGCATCTCAATGAGCTTCGTAATCTTCTTCCCTGTGATTCCAAGACCGACAAAGCTTCTCTCCTTGCAAAAGTTGTTCAACGCGTGAAAGAGTTAAAGCAGCAAGCTTCTGAAATCGCTGGGATCGAGAGTTTCCCTTCAGACACCGACGAAATCTCTGTGTCGTCCGGCTATTTTTCCGGCGACGGGAGATTGATTTTTAAAGCCTCGTTGTGCTGTGACGATCGTTCAGACCTAATACCGGACCTCGTCGGAATCCTAAACTCTCTCCACTTAAAAACTCTCAGAGCTGAAATGGCAACTCTCGGAGGGAGAACACGAAACGTTCTCGTTGTTGCTGCCGATAAAGATCACAGCATTGAATCCATTAATTTCCTTCAAAGTGCACTAAAGTCTTTGCTCGAACCCTCAGATTCCACCTACAGATCGAAGAGAAGACGGTGTTTCGATCGCAACGCAACCTCTAATAATTGA 684 46.49 MQSNNSELYRSTPGRHGFQSLQSFCSSSSYYPLPVSAISDTTHSQSPHERAVAALRNHKEAERRRREKINSHLNELRNLLPCDSKTDKASLLAKVVQRVKELKQQASEIAGIESFPSDTDEISVSSGYFSGDGRLIFKASLCCDDRSDLIPDLVGILNSLHLKTLRAEMATLGGRTRNVLVVAADKDHSIESINFLQSALKSLLEPSDSTYRSKRRRCFDRNATSNN 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 913347 914524 - BLOR02998 Blo11g00122 66322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00122 227 Coils Coil 59 79 - -
Blo11g00122 227 PANTHER TRANSCRIPTION FACTOR BHLH106-RELATED 17 223 - -
Blo11g00122 227 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 53 102 IPR011598 GO:0046983
Blo11g00122 227 CDD bHLH_AtAIG1_like 49 126 - -
Blo11g00122 227 SUPERFAMILY ACT-like 140 216 IPR045865 -
Blo11g00122 227 SMART finulus 59 108 IPR011598 GO:0046983
Blo11g00122 227 PANTHER TRANSCRIPTION FACTOR BHLH30 17 223 IPR045847 GO:0003700|GO:0006355
Blo11g00122 227 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 108 IPR036638 GO:0046983
Blo11g00122 227 Pfam Helix-loop-helix DNA-binding domain 57 102 IPR011598 GO:0046983
Blo11g00122 227 CDD ACT_UUR-ACR-like 140 204 - -
Blo11g00122 227 Gene3D - 49 111 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00481 Blo-Chr1:5281712 Blo11g00122 Blo-Chr11:913347 4.01E-50 dispersed
Blo11g00122 Blo-Chr11:913347 Blo12g00557 Blo-Chr12:23600040 1.06E-110 dispersed
Blo11g00122 Blo-Chr11:913347 Blo06g00953 Blo-Chr6:32757026 5.95E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12880 PF00010 HLH 1.90E-11 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00122 - K22484 mnt:21397816 293.123