Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00130 ATGATCTCAGAAGATCTAAGGGAGAAGGTGATTTCGCCATTAAAGCGGTTTCCAGAAGCTGTTCAAATGGAAGAACAAGAAACCAAGCTTTTAGGGAATGCTGTCATGGCTTCCCGTACCAAAATCAACGACCATACTACCCAGATAGACCACCAGCTTCACTTACAGGGAAGTCCTCAATTTCCTTATGGGATTTCGATGAACTCATTATCTGCGTCCTCGTATGTCCGCGGAAATTTCATGACCAAAGAGGGTGGAGCCTATGATTTAGGTGAACTGGATCAAGCGGTTTTTCTTTATTTTGATGGACAAGACTCTTCCACTGTTCAAAACCAACCCCAGGGCTCCGGAATTAGACCCCCAACACTGAACATTTTCCCATCTCAGCCAATGCACGTAGAGCCTTCTTCGACACGAGTATCTTCTCGACACCTTCTTTTCAAATCGAATTTCCTTCTTTTATCTTCTGTTTTTTCAGCAAGGTTTAATTTGTCAATGTTTCAACAGTCAACCACTCCCATAGTTTCTCTTTCTTCTGCATCCAATGATGGTCCAAACAGACCGTTGGAGACCAGTACCAGCATGGAGTTAGCCAACCGTGAGGGCAACAACAGACCTCCAACATCCAGTTCTGAACAGGAAGGACCTAAGACTCCAGACCCTAAGACGTTGAGAAGGCTCGCGCAGAACAGAGAGGCAGCGAGGAAAAGCAGGATTCGGAAAAAGGCCTACGTTCAGCAACTAGAGAGCAGTAGGGTTAAGCTTACTCAACTGGAACAAGAGCTGCAAAGAGCTAGATCCCAGGGTATGGTCTTCGGAGGAGGAAATATTTTAGGAGATCGCGGACTTTCCATTGGCAAGAACAATATCAGTCGTGATGCGGCTGTGTTTGATGTGGAGTATGGGAGGTGGGTGGAGGAACATCACCGGATAATGTGCGAGCTCAGGGCGGCAGTACAAGAACATGTGCAGGAAAATGAGCTCCGGGTGTACGTCGAAAACTGCATAGCACACTTGGAGGAGATGGTTAATCTGAAGAGCATGCTTGCTAAAACTGACGTCTTTCATATTACTTCCGGCGTGTGGATGACTTTGGCTGAACGTTGCTTCATGTGGATTGGTGGATTTAGGCCGTCTTACCTCATCAAGATCATTTTGAGCCAAATCGAGCCATTAACGGAGCAGCAAATGACGGGGGTCTGTGGGTTGCAAAGATCAACACAGGATGGAGAGGAAGCTCTTTCTCAAGGGCTGGAAGCTATGAATCATTCAGTTTCAGACGCCATAACCTCCGGCTCACTCACTTCTCCTCCAAACATGGCTAACTACATGCCCCAGATGGCTCTAGCCATTAGCAAGCTCTCCACCATTGAAGGCTTTGTTAGACAGGCAGATAATTTGAGGCTTCAAACGATTCATCGACTACATCATATCTTGACGATTCGTCAAAGCGCAAGATGTTTGCTAGCCATATCAGAGTGTTTTCACAGTCTTCGAGCTCTTAGTTCTCTGTGGATGGCTCGGCCTAGGCAGGAATGA 1539 46.65 MISEDLREKVISPLKRFPEAVQMEEQETKLLGNAVMASRTKINDHTTQIDHQLHLQGSPQFPYGISMNSLSASSYVRGNFMTKEGGAYDLGELDQAVFLYFDGQDSSTVQNQPQGSGIRPPTLNIFPSQPMHVEPSSTRVSSRHLLFKSNFLLLSSVFSARFNLSMFQQSTTPIVSLSSASNDGPNRPLETSTSMELANREGNNRPPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRIRKKAYVQQLESSRVKLTQLEQELQRARSQGMVFGGGNILGDRGLSIGKNNISRDAAVFDVEYGRWVEEHHRIMCELRAAVQEHVQENELRVYVENCIAHLEEMVNLKSMLAKTDVFHITSGVWMTLAERCFMWIGGFRPSYLIKIILSQIEPLTEQQMTGVCGLQRSTQDGEEALSQGLEAMNHSVSDAITSGSLTSPPNMANYMPQMALAISKLSTIEGFVRQADNLRLQTIHRLHHILTIRQSARCLLAISECFHSLRALSSLWMARPRQE 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 979355 983025 + BLOR03006 Blo11g00130 66330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00130 512 Gene3D - 221 270 - -
Blo11g00130 512 Coils Coil 241 268 - -
Blo11g00130 512 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 225 240 IPR004827 GO:0003700|GO:0006355
Blo11g00130 512 MobiDBLite consensus disorder prediction 176 217 - -
Blo11g00130 512 MobiDBLite consensus disorder prediction 218 234 - -
Blo11g00130 512 CDD bZIP_HBP1b-like 222 274 - -
Blo11g00130 512 Pfam Seed dormancy control 312 386 IPR025422 GO:0006351|GO:0043565
Blo11g00130 512 ProSiteProfiles DOG1 domain profile. 294 508 IPR025422 GO:0006351|GO:0043565
Blo11g00130 512 PANTHER TRANSCRIPTION FACTOR TGA9 91 511 - -
Blo11g00130 512 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 91 511 - -
Blo11g00130 512 Pfam Basic region leucine zipper 219 263 IPR004827 GO:0003700|GO:0006355
Blo11g00130 512 SMART brlzneu 218 290 IPR004827 GO:0003700|GO:0006355
Blo11g00130 512 SUPERFAMILY Leucine zipper domain 222 265 IPR046347 GO:0003700|GO:0006355
Blo11g00130 512 MobiDBLite consensus disorder prediction 176 240 - -
Blo11g00130 512 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 264 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00130 Blo-Chr11:979355 Blo17g00209 Blo-Chr17:2111317 9.46E-75 dispersed
Blo11g00130 Blo-Chr11:979355 Blo12g00600 Blo-Chr12:24292970 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12883 PF14144 DOG1 3.70E-28 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00130 K14431 - pvy:116117562 612.838