Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00136 ATGAATCACTTGACTATCCAGACTGAAGATGCATTTTCCAGTTTGCTTGAACATGCGGCTAATAATGACATTGAAGGTTTCCAAAAATCAATTGAGCTTGATGTTTCTGCAGTTGATGAGATTGGGCGCTGGTATGGTCGCCAAAAGAGCTCAAAGCAGATGGTTTATGAGTATAGAACACCTCTAATGGTTGCTGCTACTTATGGAAGCATTGATGTCATAAAGTTGATTCTTTCTTTATCTCATGCTGATATAAATAGATCTGCTGGCTTTGACAAAAGCACTGTTCTTCACTGTGCAGCCTCTGGTGGGGCTGTGAATGCAGCTGATGTTGTGAAACTGCTTTTGGCTGCTGGCAGTGATCCAAATTTGGTCGATGCTAATGGTCATCGCCCTCTTGATATTATTGATGTTATCCCAAAACTTCAGAATGTCAAAAAGGCCCTTGAAGAACTCCTTATATCTAATGTTTCTTCTGCCAGTTCATGCAATCTTAGAATCTCAACTTGTGGCTTAAGTTCTAATTCTCCTTCTCTTCCATCTTCTCCTGTACAAGGGTTGCTGCCTACTTCTGATTTTGTTTCTTCACCAACAAAGTCGAAATTCTCTGATTTCTCAGCATCATCAGTGATAGAGAGAAAGGAATACCCTGTTGATCCATCTCTCCCAGACATCAAGAATAGCATTTATTCTACTGATGATTTTAGAATGTATTCATTCAAGGTCCGGCCTTGTTCACGTGCATATTCTCATGATTGGACTGAGTGCCCTTTTGTCCATCCAGGAGAGAATGCTCGAAGAAGGGATCCGAGGAAGTTCCATTATAGTTGTGTTCCATGTCCCGAATTTCGAAAGGGCACCTGTAGACGTGGAGATATGTGTGAATATGCTCATGGGGTTTTTGAATGCTGGCTTCACCCAGCACAGTACAGAACCCGCCTTTGTAAGGATGGAACAAATTGTGGTAGGAGAGTTTGTTTTTTTGCACATACTGCTGAAGAACTTCGTCCCTTATATGTTTCTACTGGGTCTGCTGTTCCCTCTCCTCGTTCTGGTAGTCTTGGAACTGTTGATTATGCTGCAGCTATGAACATCTTACCTGGCTCTCCATCTTCAAAGTCTGTCACATCTCCTTCACCATTTACTCCTCCCATGTCTCCGTCTGCCAATAGCATGCAACACTCCTCTGTAAATTGGCCCCAACCAAATGTCCCTGCTTTGCACCTCTCTATAGGAAATCTTCAGTCCAGTCGGTTGAGATTGTCCCTGAATGCAAGAGATATTCCAGTTGATGACTTTGATTTGCTTCAAGATTTTGATATGCAGCACCAACAGCTCCTAAATGATTATTGTGGTGTTTCTCAATTGTCTTTAATTTCTAAGTCCGCCAATCACTCTGGAAGGCTGAAAACTCTGACCCCTTCAAACTTGGATGATCTCTTCACTACGGAAAGTTCATCTCCTCGGCACTCAGATCAGGCATTAGCTTCAACTGTATTTTCTCCAACACATAAATCAGCTGTACTTAATCAATTTCAGCAGCAGCAGAGTATGCTGTCTCCTATCAATGCAAACTTTTCTCCGAAAAGTGTGGATCATCATCTATTGCATGCCTCTTTTGGGGTTTCATCATCAGAGAGGATGTCTCCACCGAATGCAGAACCTGTCTCACCTATCAGCTCACGATTATCTATGCTAGCACAACGAGAGAAGCCACAACAATTTCGTAGCCTTAGCTCAAGGGAGCTCGGTTCCAGTTTTGCCTCAGTTGGTTCCCCATTGAACTCTTGGTCGACGCTTGGATCACCCAATGATAATGTTGATTGGGTAACAAACACTGGTTATATGGGTAAGCTTCGCAGATCATCCTCGTATGAGCTTGTGGACAATGGAGAAGAGCCAGATTTTTCATGGGTTCAGTCACTTGTTAAAGACTCACCGAGTGAGATAAAAGAAAAAGTAGCTCCAATTGACTCAGGTAGCATGAGTATTGCGCCTTCTGAGGAGTGTTCAAATGATAACTTATGCGACTCTGTCGATCATGCTTTGTTGGCAGCATGGCTGGAGCAAATGTAG 2076 42.87 MNHLTIQTEDAFSSLLEHAANNDIEGFQKSIELDVSAVDEIGRWYGRQKSSKQMVYEYRTPLMVAATYGSIDVIKLILSLSHADINRSAGFDKSTVLHCAASGGAVNAADVVKLLLAAGSDPNLVDANGHRPLDIIDVIPKLQNVKKALEELLISNVSSASSCNLRISTCGLSSNSPSLPSSPVQGLLPTSDFVSSPTKSKFSDFSASSVIERKEYPVDPSLPDIKNSIYSTDDFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPEFRKGTCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCGRRVCFFAHTAEELRPLYVSTGSAVPSPRSGSLGTVDYAAAMNILPGSPSSKSVTSPSPFTPPMSPSANSMQHSSVNWPQPNVPALHLSIGNLQSSRLRLSLNARDIPVDDFDLLQDFDMQHQQLLNDYCGVSQLSLISKSANHSGRLKTLTPSNLDDLFTTESSSPRHSDQALASTVFSPTHKSAVLNQFQQQQSMLSPINANFSPKSVDHHLLHASFGVSSSERMSPPNAEPVSPISSRLSMLAQREKPQQFRSLSSRELGSSFASVGSPLNSWSTLGSPNDNVDWVTNTGYMGKLRRSSSYELVDNGEEPDFSWVQSLVKDSPSEIKEKVAPIDSGSMSIAPSEECSNDNLCDSVDHALLAAWLEQM 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1060843 1062918 - BLOR03012 Blo11g00136 66336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00136 691 Gene3D - 276 337 - -
Blo11g00136 691 SUPERFAMILY Ankyrin repeat 13 135 IPR036770 -
Blo11g00136 691 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 279 299 IPR000571 GO:0046872
Blo11g00136 691 Gene3D - 7 159 IPR036770 -
Blo11g00136 691 ProSiteProfiles Ankyrin repeat profile. 92 127 IPR002110 GO:0005515
Blo11g00136 691 SMART c3hfinal6 309 332 IPR000571 GO:0046872
Blo11g00136 691 SMART c3hfinal6 274 300 IPR000571 GO:0046872
Blo11g00136 691 Pfam Ankyrin repeats (3 copies) 57 126 IPR002110 GO:0005515
Blo11g00136 691 ProSiteProfiles Ankyrin repeat region circular profile. 92 126 - -
Blo11g00136 691 PANTHER UNKEMPT FAMILY MEMBER 1 691 IPR045234 -
Blo11g00136 691 PANTHER ARM REPEAT CCCH-TYPE ZINC FINGER PROTEIN 1 691 - -
Blo11g00136 691 SMART ANK_2a 92 124 IPR002110 GO:0005515
Blo11g00136 691 SMART ANK_2a 57 87 IPR002110 GO:0005515
Blo11g00136 691 MobiDBLite consensus disorder prediction 369 396 - -
Blo11g00136 691 ProSiteProfiles Zinc finger C3H1-type profile. 279 301 IPR000571 GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00066 Blo-Chr2:452529 Blo11g00136 Blo-Chr11:1060843 4.68E-58 dispersed
Blo09g00418 Blo-Chr9:15146487 Blo11g00136 Blo-Chr11:1060843 0 dispersed
Blo11g00136 Blo-Chr11:1060843 Blo13g00857 Blo-Chr13:31160361 1.60E-134 dispersed
Blo11g00136 Blo-Chr11:1060843 Blo07g01252 Blo-Chr7:32675860 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12885 PF12796 Ank_2 1.40E-08 CL0465 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00136 - - jre:109007212 975.311