Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00181 ATGGCAACTCGGGTCGAAGAAGAAGAGAAGGCAGCAGCGTCAGCAAACTCAGTCTCAGCGAGACGTTACAGAAAGTGGGTGCCCTTGTTTTGTAGGGTTTTGGCTGTTCTTGCGAGTGCTAGTGCAGCCATTGTGATGGGTTTGAACAAAGAGAGCAAAGACTTCGTCGTTGCAACCACTGGAATAGTGCCTGTTAAGGTCACTCTGACTGCCAAGTTTCAACATACTCCGGCTTTTGTATTCTTTGTGGTGGCCAATGGAATGGCTTCTCTCCACAGCTTGGTGATGATAATAGTTGATGTTTTTGGGAAGAAGCTTGGCTATCAGAGATTGAGATTTGCCATAGTTGCTATTTTGGATATGCGCATTGCGGAAACAGAGAGTAGAGAGAGAAAGTGTTCATCTGTGTTTGTCAAGTTTGATTGGCATCGTAGCCTTTCAGAAGGTTTTCACATTATCGTAGCAGATCTAATGGAACAGGGTAAATCTGTTGCATCATCTCGTTCTAAAGAGAAAAAGCTTTTTCTTTTGGAGAATACCTCGTTGAGTCTTACGTTGGCAGCATATCTTGCTAATACACATTCCACCGTGATTTTCGTGTTTCAGATATTAAGTAGATGGGATCCAAATGAAGCATGCAGGCCTATCATTGGGGAAGCACCTGTATTTTATCCCACGACTGAGGAGTTTGAAGATACACTAGGTTATATAGCAAAGATTCGCAAGGAAGCAGAATTATATGGTATTTGTCGGATTGTTCCTCCACCTACATGGAATCCACCATGCATTCTTAAGGAGAAAGAAATATGGGAGAATGCAAAATTTTCAACGCGGATTCAGCTAGTTGACTTGCTACAAAATAGGGAACCCATGAGAAAGAATAGCAGAAGCAGAAAAAGAAAACGAAGAAAGAATTCAAGAATGGGAAAAATGAGGAGGTCAACAAATTCTGGTTCTGACACAAATGTTCCGTCTGAGACAGATAACACATTTGGATTCAATTCTGGACCAGATTTTACGCTCGCTGATTTTCAGAGACATGCTGATTATTTTAAAAAGTGCTATTTTGGAATGAAAGAGGCAGAGAATGACTTAGATGCTAGTGAAATTGAACCAAAGAAGAGATGGCAGCCATCTGTGGAAGAAATTGAAGGCGAATACTGGCGGATAGTTGAACAACCAACGGATGAGGTTGAGGTGTACTATGGAGCTGACTTGGAAACAGGAACATTTGGAAGTGGGTTCCCTAAAGCGTCACATTCGTCAACTCAAAGCAATTCAGATAAGTATATGATCTCGGGCTGGAATCTTAATAACTTTCCGCGGTTGCCAGGTTCTGTGTTGGGTTTTGAAGAAAGCAATATCTCAGGAGTTCTAGTGCCATGGCTTTACGTTGGGATGTGCTTTTCATCATTTTGTTGGCATGTTGAAGACCACCATCTTTACTCCTTGAACTATTTACACTTGGGTGATCCAAAAGTTTGGTACGGAGTTCCTGGAAGCCATGCTTCTGCCTTGGAAGCTGCAATGAAAAAGCATTTGCCAGATTTGTTTGAGGAACAGCCAGATTTACTTCATGAATTGGTTACTCAGTTATCACCTTCGGTTCTCAAATCAGAAGGAATACCAGTATACCGTGCTGTTCAAAATGCAAGGGAGTTTGTTCTGACATTTCCGAGGGCATACCATGCTGGATTTAATTGCGGTTTCAATTGCGCCGAGGCAGTGAATGTGGCACCTGTTGATTGGTTGGTTCATGGGCAAAATGCAGTGGAGCTCTATAGTGAGCAGTCTCACAAGACATCAGTGTCTCATGATAAATTATTATTTGGTTCAGCTCAGGCAGCTGCTCAAGCACTTTCAGAAATTCATGTTCTTGGGAAGGAAACTCCATGGAAATATGTGTGTGGTATAGATGGTGCCCTTACAAAGGCGGTTAAGGGAAGGGTACAGATAGAGAAGGAGAGAAGAGATTTTCTTCCATCGCATTTGAAGGTGAAAAAGATGAAAAGAGAAGTCGATTGCGAGGACAGGGAATGTTTTTCTTGCTTTTACGACTTACACTTGTCTGCAGCTGGCTGCAAATGCTCCCCCAATCGTTTTTCATGCCTTAAACATGCAAGTAACTTTTGTTCTTGTGAAATGGATCAAAGGTTTGTCCTCATTCGCTATACTATAGATGAACTCGATACTCTTGTTGAGGCCTTGGAAGGAGGATTAGAAGCCGTCAAACTATGGGCCACAGAGAACTCTCAAAAAACTTCTTCTTCGGATGACTGCGATACAAATATGGAATCGGGGAGTGAATTATGCAAATCTAAACAAGGCTTAATCGATTTAAATCTTGATATTATGTGGGAGGAAGAGAAAAATGGGTGGCTTGGTTCATCTGATCATAAACTAATCAAAGATGAAGTCGGGAATTTTCATAGACGGGGCAGAGAAAGGCAAGCCTCACCCGCTTTTTCAGGCACAGATCGTTCTTCCGGTTTTGGAGACGGTGGGAGTAGAGATTTTTTTAGTAGTAGGCTGTTTGATTTTGATATTGCATTTCCTCAACTTTCGCATACTACTTCAATGCCGAGTTGTTCCATAAAAATGGAAGCTCTACATCCCTCTGAGCCCGAGCTAATAGACATCGGATCTCCCGTGTTTGAAAACGGTTGGTGCAGCGAGCAGGCTATATTTCCGAAAGGATATAGAAGCCGTGTTAAATTCAACAGCCTGCTTGATCCATGGTTTAGTTGTAGCTATGTATCAGAAGTTCTTGATGGAGGGTCTCTTGGGCCTCTATTCAAGGTCACGTCTGAGGAATGTCCGTGGGAGCCTTTTGCTAACTCCTCTGCCGATAAATGCTGGGAAATGGTAGCGCAGAGTATAAACCGGGACATTAACACAAGCAAAAGGCTCCATGATTTGCAGCCATTGCAGAAAATTAGTGGTCTTCAAATGTTTGGTTTCCTCTCCCCGCATATTAGACAGCGAATCGAGGCGCTCGATCCATATCATAGATGCTTGGAGTATTGGAAATATCAGCGCAGCAATGGCAATTCCAAGATCGATTATCCGTCAAGACACGCACCCGAAGCGTCTAGAACAATGACTCTCGATATCTTCAAAGAAAGTGTTCGTCAAGGGGACGAAGAAAAGGTGCTGAGAGGGCTCCTGAATAAGGCAAGTAAAAGAGAGCTGAGCTTAATGCATAGAATCTTCTGCCATGAACGTATAAATGATGAATTGAGATTGGCTCTGGCATCAACTATTGACGAGAAGCTCAAATTTTTTGGATAG 3291 42.6 MATRVEEEEKAAASANSVSARRYRKWVPLFCRVLAVLASASAAIVMGLNKESKDFVVATTGIVPVKVTLTAKFQHTPAFVFFVVANGMASLHSLVMIIVDVFGKKLGYQRLRFAIVAILDMRIAETESRERKCSSVFVKFDWHRSLSEGFHIIVADLMEQGKSVASSRSKEKKLFLLENTSLSLTLAAYLANTHSTVIFVFQILSRWDPNEACRPIIGEAPVFYPTTEEFEDTLGYIAKIRKEAELYGICRIVPPPTWNPPCILKEKEIWENAKFSTRIQLVDLLQNREPMRKNSRSRKRKRRKNSRMGKMRRSTNSGSDTNVPSETDNTFGFNSGPDFTLADFQRHADYFKKCYFGMKEAENDLDASEIEPKKRWQPSVEEIEGEYWRIVEQPTDEVEVYYGADLETGTFGSGFPKASHSSTQSNSDKYMISGWNLNNFPRLPGSVLGFEESNISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHLGDPKVWYGVPGSHASALEAAMKKHLPDLFEEQPDLLHELVTQLSPSVLKSEGIPVYRAVQNAREFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLVHGQNAVELYSEQSHKTSVSHDKLLFGSAQAAAQALSEIHVLGKETPWKYVCGIDGALTKAVKGRVQIEKERRDFLPSHLKVKKMKREVDCEDRECFSCFYDLHLSAAGCKCSPNRFSCLKHASNFCSCEMDQRFVLIRYTIDELDTLVEALEGGLEAVKLWATENSQKTSSSDDCDTNMESGSELCKSKQGLIDLNLDIMWEEEKNGWLGSSDHKLIKDEVGNFHRRGRERQASPAFSGTDRSSGFGDGGSRDFFSSRLFDFDIAFPQLSHTTSMPSCSIKMEALHPSEPELIDIGSPVFENGWCSEQAIFPKGYRSRVKFNSLLDPWFSCSYVSEVLDGGSLGPLFKVTSEECPWEPFANSSADKCWEMVAQSINRDINTSKRLHDLQPLQKISGLQMFGFLSPHIRQRIEALDPYHRCLEYWKYQRSNGNSKIDYPSRHAPEASRTMTLDIFKESVRQGDEEKVLRGLLNKASKRELSLMHRIFCHERINDELRLALASTIDEKLKFFG 1096
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1419284 1427709 - BLOR03057 Blo11g00181 66381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00181 1096 Pfam F/Y rich C-terminus 929 1010 IPR003889 GO:0005634
Blo11g00181 1096 ProSiteProfiles FYR domain FYRC motif profile. 927 1015 IPR003889 GO:0005634
Blo11g00181 1096 MobiDBLite consensus disorder prediction 290 331 - -
Blo11g00181 1096 PANTHER LYSINE-SPECIFIC DEMETHYLASE 202 1090 - -
Blo11g00181 1096 SMART fyrc_3 931 1017 IPR003889 GO:0005634
Blo11g00181 1096 SMART fyrn_3 881 925 IPR003888 GO:0005634
Blo11g00181 1096 Pfam C5HC2 zinc finger 680 732 IPR004198 -
Blo11g00181 1096 SUPERFAMILY Clavaminate synthase-like 430 615 - -
Blo11g00181 1096 Pfam JmjC domain, hydroxylase 462 578 IPR003347 -
Blo11g00181 1096 Pfam jmjN domain 221 254 IPR003349 -
Blo11g00181 1096 ProSiteProfiles JmjN domain profile. 220 261 IPR003349 -
Blo11g00181 1096 MobiDBLite consensus disorder prediction 293 310 - -
Blo11g00181 1096 SMART JmjN_1 219 260 IPR003349 -
Blo11g00181 1096 MobiDBLite consensus disorder prediction 311 331 - -
Blo11g00181 1096 Pfam Casparian strip membrane protein domain 25 122 IPR006702 -
Blo11g00181 1096 Pfam F/Y-rich N-terminus 877 922 IPR003888 GO:0005634
Blo11g00181 1096 ProSiteProfiles FYR domain FYRN motif profile. 867 925 IPR003888 GO:0005634
Blo11g00181 1096 Gene3D - 875 1006 - -
Blo11g00181 1096 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 30 123 IPR006459 -
Blo11g00181 1096 Gene3D Cupin 205 579 - -
Blo11g00181 1096 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ14-RELATED 202 1090 - -
Blo11g00181 1096 ProSiteProfiles JmjC domain profile. 429 595 IPR003347 -
Blo11g00181 1096 SMART cupin_9 429 595 IPR003347 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00362 Blo-Chr3:8136465 Blo11g00181 Blo-Chr11:1419284 9.35E-107 dispersed
Blo11g00181 Blo-Chr11:1419284 Blo11g00440 Blo-Chr11:3878954 1.09E-09 dispersed
Blo11g00181 Blo-Chr11:1419284 Blo10g00272 Blo-Chr10:3891155 1.16E-25 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12888 PF02373 JmjC 2.70E-45 CL0029 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00181 - - zju:107433853 1018.45