Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00181 | ATGGCAACTCGGGTCGAAGAAGAAGAGAAGGCAGCAGCGTCAGCAAACTCAGTCTCAGCGAGACGTTACAGAAAGTGGGTGCCCTTGTTTTGTAGGGTTTTGGCTGTTCTTGCGAGTGCTAGTGCAGCCATTGTGATGGGTTTGAACAAAGAGAGCAAAGACTTCGTCGTTGCAACCACTGGAATAGTGCCTGTTAAGGTCACTCTGACTGCCAAGTTTCAACATACTCCGGCTTTTGTATTCTTTGTGGTGGCCAATGGAATGGCTTCTCTCCACAGCTTGGTGATGATAATAGTTGATGTTTTTGGGAAGAAGCTTGGCTATCAGAGATTGAGATTTGCCATAGTTGCTATTTTGGATATGCGCATTGCGGAAACAGAGAGTAGAGAGAGAAAGTGTTCATCTGTGTTTGTCAAGTTTGATTGGCATCGTAGCCTTTCAGAAGGTTTTCACATTATCGTAGCAGATCTAATGGAACAGGGTAAATCTGTTGCATCATCTCGTTCTAAAGAGAAAAAGCTTTTTCTTTTGGAGAATACCTCGTTGAGTCTTACGTTGGCAGCATATCTTGCTAATACACATTCCACCGTGATTTTCGTGTTTCAGATATTAAGTAGATGGGATCCAAATGAAGCATGCAGGCCTATCATTGGGGAAGCACCTGTATTTTATCCCACGACTGAGGAGTTTGAAGATACACTAGGTTATATAGCAAAGATTCGCAAGGAAGCAGAATTATATGGTATTTGTCGGATTGTTCCTCCACCTACATGGAATCCACCATGCATTCTTAAGGAGAAAGAAATATGGGAGAATGCAAAATTTTCAACGCGGATTCAGCTAGTTGACTTGCTACAAAATAGGGAACCCATGAGAAAGAATAGCAGAAGCAGAAAAAGAAAACGAAGAAAGAATTCAAGAATGGGAAAAATGAGGAGGTCAACAAATTCTGGTTCTGACACAAATGTTCCGTCTGAGACAGATAACACATTTGGATTCAATTCTGGACCAGATTTTACGCTCGCTGATTTTCAGAGACATGCTGATTATTTTAAAAAGTGCTATTTTGGAATGAAAGAGGCAGAGAATGACTTAGATGCTAGTGAAATTGAACCAAAGAAGAGATGGCAGCCATCTGTGGAAGAAATTGAAGGCGAATACTGGCGGATAGTTGAACAACCAACGGATGAGGTTGAGGTGTACTATGGAGCTGACTTGGAAACAGGAACATTTGGAAGTGGGTTCCCTAAAGCGTCACATTCGTCAACTCAAAGCAATTCAGATAAGTATATGATCTCGGGCTGGAATCTTAATAACTTTCCGCGGTTGCCAGGTTCTGTGTTGGGTTTTGAAGAAAGCAATATCTCAGGAGTTCTAGTGCCATGGCTTTACGTTGGGATGTGCTTTTCATCATTTTGTTGGCATGTTGAAGACCACCATCTTTACTCCTTGAACTATTTACACTTGGGTGATCCAAAAGTTTGGTACGGAGTTCCTGGAAGCCATGCTTCTGCCTTGGAAGCTGCAATGAAAAAGCATTTGCCAGATTTGTTTGAGGAACAGCCAGATTTACTTCATGAATTGGTTACTCAGTTATCACCTTCGGTTCTCAAATCAGAAGGAATACCAGTATACCGTGCTGTTCAAAATGCAAGGGAGTTTGTTCTGACATTTCCGAGGGCATACCATGCTGGATTTAATTGCGGTTTCAATTGCGCCGAGGCAGTGAATGTGGCACCTGTTGATTGGTTGGTTCATGGGCAAAATGCAGTGGAGCTCTATAGTGAGCAGTCTCACAAGACATCAGTGTCTCATGATAAATTATTATTTGGTTCAGCTCAGGCAGCTGCTCAAGCACTTTCAGAAATTCATGTTCTTGGGAAGGAAACTCCATGGAAATATGTGTGTGGTATAGATGGTGCCCTTACAAAGGCGGTTAAGGGAAGGGTACAGATAGAGAAGGAGAGAAGAGATTTTCTTCCATCGCATTTGAAGGTGAAAAAGATGAAAAGAGAAGTCGATTGCGAGGACAGGGAATGTTTTTCTTGCTTTTACGACTTACACTTGTCTGCAGCTGGCTGCAAATGCTCCCCCAATCGTTTTTCATGCCTTAAACATGCAAGTAACTTTTGTTCTTGTGAAATGGATCAAAGGTTTGTCCTCATTCGCTATACTATAGATGAACTCGATACTCTTGTTGAGGCCTTGGAAGGAGGATTAGAAGCCGTCAAACTATGGGCCACAGAGAACTCTCAAAAAACTTCTTCTTCGGATGACTGCGATACAAATATGGAATCGGGGAGTGAATTATGCAAATCTAAACAAGGCTTAATCGATTTAAATCTTGATATTATGTGGGAGGAAGAGAAAAATGGGTGGCTTGGTTCATCTGATCATAAACTAATCAAAGATGAAGTCGGGAATTTTCATAGACGGGGCAGAGAAAGGCAAGCCTCACCCGCTTTTTCAGGCACAGATCGTTCTTCCGGTTTTGGAGACGGTGGGAGTAGAGATTTTTTTAGTAGTAGGCTGTTTGATTTTGATATTGCATTTCCTCAACTTTCGCATACTACTTCAATGCCGAGTTGTTCCATAAAAATGGAAGCTCTACATCCCTCTGAGCCCGAGCTAATAGACATCGGATCTCCCGTGTTTGAAAACGGTTGGTGCAGCGAGCAGGCTATATTTCCGAAAGGATATAGAAGCCGTGTTAAATTCAACAGCCTGCTTGATCCATGGTTTAGTTGTAGCTATGTATCAGAAGTTCTTGATGGAGGGTCTCTTGGGCCTCTATTCAAGGTCACGTCTGAGGAATGTCCGTGGGAGCCTTTTGCTAACTCCTCTGCCGATAAATGCTGGGAAATGGTAGCGCAGAGTATAAACCGGGACATTAACACAAGCAAAAGGCTCCATGATTTGCAGCCATTGCAGAAAATTAGTGGTCTTCAAATGTTTGGTTTCCTCTCCCCGCATATTAGACAGCGAATCGAGGCGCTCGATCCATATCATAGATGCTTGGAGTATTGGAAATATCAGCGCAGCAATGGCAATTCCAAGATCGATTATCCGTCAAGACACGCACCCGAAGCGTCTAGAACAATGACTCTCGATATCTTCAAAGAAAGTGTTCGTCAAGGGGACGAAGAAAAGGTGCTGAGAGGGCTCCTGAATAAGGCAAGTAAAAGAGAGCTGAGCTTAATGCATAGAATCTTCTGCCATGAACGTATAAATGATGAATTGAGATTGGCTCTGGCATCAACTATTGACGAGAAGCTCAAATTTTTTGGATAG | 3291 | 42.6 | MATRVEEEEKAAASANSVSARRYRKWVPLFCRVLAVLASASAAIVMGLNKESKDFVVATTGIVPVKVTLTAKFQHTPAFVFFVVANGMASLHSLVMIIVDVFGKKLGYQRLRFAIVAILDMRIAETESRERKCSSVFVKFDWHRSLSEGFHIIVADLMEQGKSVASSRSKEKKLFLLENTSLSLTLAAYLANTHSTVIFVFQILSRWDPNEACRPIIGEAPVFYPTTEEFEDTLGYIAKIRKEAELYGICRIVPPPTWNPPCILKEKEIWENAKFSTRIQLVDLLQNREPMRKNSRSRKRKRRKNSRMGKMRRSTNSGSDTNVPSETDNTFGFNSGPDFTLADFQRHADYFKKCYFGMKEAENDLDASEIEPKKRWQPSVEEIEGEYWRIVEQPTDEVEVYYGADLETGTFGSGFPKASHSSTQSNSDKYMISGWNLNNFPRLPGSVLGFEESNISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHLGDPKVWYGVPGSHASALEAAMKKHLPDLFEEQPDLLHELVTQLSPSVLKSEGIPVYRAVQNAREFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLVHGQNAVELYSEQSHKTSVSHDKLLFGSAQAAAQALSEIHVLGKETPWKYVCGIDGALTKAVKGRVQIEKERRDFLPSHLKVKKMKREVDCEDRECFSCFYDLHLSAAGCKCSPNRFSCLKHASNFCSCEMDQRFVLIRYTIDELDTLVEALEGGLEAVKLWATENSQKTSSSDDCDTNMESGSELCKSKQGLIDLNLDIMWEEEKNGWLGSSDHKLIKDEVGNFHRRGRERQASPAFSGTDRSSGFGDGGSRDFFSSRLFDFDIAFPQLSHTTSMPSCSIKMEALHPSEPELIDIGSPVFENGWCSEQAIFPKGYRSRVKFNSLLDPWFSCSYVSEVLDGGSLGPLFKVTSEECPWEPFANSSADKCWEMVAQSINRDINTSKRLHDLQPLQKISGLQMFGFLSPHIRQRIEALDPYHRCLEYWKYQRSNGNSKIDYPSRHAPEASRTMTLDIFKESVRQGDEEKVLRGLLNKASKRELSLMHRIFCHERINDELRLALASTIDEKLKFFG | 1096 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1419284 | 1427709 | - | BLOR03057 | Blo11g00181 | 66381 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00181 | 1096 | Pfam | F/Y rich C-terminus | 929 | 1010 | IPR003889 | GO:0005634 | |
Blo11g00181 | 1096 | ProSiteProfiles | FYR domain FYRC motif profile. | 927 | 1015 | IPR003889 | GO:0005634 | |
Blo11g00181 | 1096 | MobiDBLite | consensus disorder prediction | 290 | 331 | - | - | |
Blo11g00181 | 1096 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 202 | 1090 | - | - | |
Blo11g00181 | 1096 | SMART | fyrc_3 | 931 | 1017 | IPR003889 | GO:0005634 | |
Blo11g00181 | 1096 | SMART | fyrn_3 | 881 | 925 | IPR003888 | GO:0005634 | |
Blo11g00181 | 1096 | Pfam | C5HC2 zinc finger | 680 | 732 | IPR004198 | - | |
Blo11g00181 | 1096 | SUPERFAMILY | Clavaminate synthase-like | 430 | 615 | - | - | |
Blo11g00181 | 1096 | Pfam | JmjC domain, hydroxylase | 462 | 578 | IPR003347 | - | |
Blo11g00181 | 1096 | Pfam | jmjN domain | 221 | 254 | IPR003349 | - | |
Blo11g00181 | 1096 | ProSiteProfiles | JmjN domain profile. | 220 | 261 | IPR003349 | - | |
Blo11g00181 | 1096 | MobiDBLite | consensus disorder prediction | 293 | 310 | - | - | |
Blo11g00181 | 1096 | SMART | JmjN_1 | 219 | 260 | IPR003349 | - | |
Blo11g00181 | 1096 | MobiDBLite | consensus disorder prediction | 311 | 331 | - | - | |
Blo11g00181 | 1096 | Pfam | Casparian strip membrane protein domain | 25 | 122 | IPR006702 | - | |
Blo11g00181 | 1096 | Pfam | F/Y-rich N-terminus | 877 | 922 | IPR003888 | GO:0005634 | |
Blo11g00181 | 1096 | ProSiteProfiles | FYR domain FYRN motif profile. | 867 | 925 | IPR003888 | GO:0005634 | |
Blo11g00181 | 1096 | Gene3D | - | 875 | 1006 | - | - | |
Blo11g00181 | 1096 | TIGRFAM | A_tha_TIGR01569: plant integral membrane protein TIGR01569 | 30 | 123 | IPR006459 | - | |
Blo11g00181 | 1096 | Gene3D | Cupin | 205 | 579 | - | - | |
Blo11g00181 | 1096 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE JMJ14-RELATED | 202 | 1090 | - | - | |
Blo11g00181 | 1096 | ProSiteProfiles | JmjC domain profile. | 429 | 595 | IPR003347 | - | |
Blo11g00181 | 1096 | SMART | cupin_9 | 429 | 595 | IPR003347 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00362 | Blo-Chr3:8136465 | Blo11g00181 | Blo-Chr11:1419284 | 9.35E-107 | dispersed | |
Blo11g00181 | Blo-Chr11:1419284 | Blo11g00440 | Blo-Chr11:3878954 | 1.09E-09 | dispersed | |
Blo11g00181 | Blo-Chr11:1419284 | Blo10g00272 | Blo-Chr10:3891155 | 1.16E-25 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12888 | PF02373 | JmjC | 2.70E-45 | CL0029 | Blo | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00181 | - | - | zju:107433853 | 1018.45 |