Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00187 | ATGAAGGAGAGTGGGAGGAAACAGGGAGCAGCGTCGCCATGTGCAGCGTGTAAGTTGCTGAGAAGAAGGTGCGGGGAAGAGTGTGTGTTTGCTCCTTATTTTCCGGCTGATCAACCCCACAAGTTTGCTTCTGTTCACAAGGTCTTTGGGGCAAGCAATGTCAACAAGATGTTGCAGGAGTTGCCAATGCATCAACGAGGCGATGCCGTGAGTAGCTTAGTTTACGAGGCCAACGCGAGAGTGAGAGATCCAGTCTATGGCTGCGCCGGGGCCATCTCTTCGCTACAACAACAAATCGACCTTCTTCAAACCCAACTGGCATTGGCTCAGGCCGAGGTGGTGCACCTTCGGATGCGCCAGGGCGCGCCGTTTTCAAACCACAGTGCGAGCCCACCGAGCCCGAGTAACAGCGGCTCGCCTCCGTCTAGGCTATTGGGTTCACACTCCAAGCCCATTTTTGAAATGGACTTGATTGTGGACCACGCCAACGCCATGAGTGATTCTATTTGTTGTAGAATTAGAGAATGGTGGTCGAGGCTGTCTTGGCAAATTGGTTCGGATCGAACCTTTGCCGTAACCGATATGGGTAAATATAAAGATATAAGGTTGAGTGTGAGATTATACGACGGAGAATTCTCGTGA | 642 | 51.4 | MKESGRKQGAASPCAACKLLRRRCGEECVFAPYFPADQPHKFASVHKVFGASNVNKMLQELPMHQRGDAVSSLVYEANARVRDPVYGCAGAISSLQQQIDLLQTQLALAQAEVVHLRMRQGAPFSNHSASPPSPSNSGSPPSRLLGSHSKPIFEMDLIVDHANAMSDSICCRIREWWSRLSWQIGSDRTFAVTDMGKYKDIRLSVRLYDGEFS | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1483719 | 1485141 | - | BLOR03063 | Blo11g00187 | 66387 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00187 | 213 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 165 | - | - | |
Blo11g00187 | 213 | Coils | Coil | 92 | 119 | - | - | |
Blo11g00187 | 213 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 3 | 1 | 165 | - | - | |
Blo11g00187 | 213 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 110 | IPR004883 | - | |
Blo11g00187 | 213 | ProSiteProfiles | LOB domain profile. | 12 | 113 | IPR004883 | - | |
Blo11g00187 | 213 | MobiDBLite | consensus disorder prediction | 122 | 145 | - | - | |
Blo11g00187 | 213 | MobiDBLite | consensus disorder prediction | 123 | 144 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo11g00187 | Blo-Chr11:1483719 | Blo15g00606 | Blo-Chr15:14709666 | 4.89E-69 | dispersed | |
Blo11g00187 | Blo-Chr11:1483719 | Blo04g00218 | Blo-Chr4:1690897 | 9.35E-61 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12889 | PF03195 | LOB | 1.50E-42 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00187 | - | - | twl:120014532 | 235.728 |