Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00187 ATGAAGGAGAGTGGGAGGAAACAGGGAGCAGCGTCGCCATGTGCAGCGTGTAAGTTGCTGAGAAGAAGGTGCGGGGAAGAGTGTGTGTTTGCTCCTTATTTTCCGGCTGATCAACCCCACAAGTTTGCTTCTGTTCACAAGGTCTTTGGGGCAAGCAATGTCAACAAGATGTTGCAGGAGTTGCCAATGCATCAACGAGGCGATGCCGTGAGTAGCTTAGTTTACGAGGCCAACGCGAGAGTGAGAGATCCAGTCTATGGCTGCGCCGGGGCCATCTCTTCGCTACAACAACAAATCGACCTTCTTCAAACCCAACTGGCATTGGCTCAGGCCGAGGTGGTGCACCTTCGGATGCGCCAGGGCGCGCCGTTTTCAAACCACAGTGCGAGCCCACCGAGCCCGAGTAACAGCGGCTCGCCTCCGTCTAGGCTATTGGGTTCACACTCCAAGCCCATTTTTGAAATGGACTTGATTGTGGACCACGCCAACGCCATGAGTGATTCTATTTGTTGTAGAATTAGAGAATGGTGGTCGAGGCTGTCTTGGCAAATTGGTTCGGATCGAACCTTTGCCGTAACCGATATGGGTAAATATAAAGATATAAGGTTGAGTGTGAGATTATACGACGGAGAATTCTCGTGA 642 51.4 MKESGRKQGAASPCAACKLLRRRCGEECVFAPYFPADQPHKFASVHKVFGASNVNKMLQELPMHQRGDAVSSLVYEANARVRDPVYGCAGAISSLQQQIDLLQTQLALAQAEVVHLRMRQGAPFSNHSASPPSPSNSGSPPSRLLGSHSKPIFEMDLIVDHANAMSDSICCRIREWWSRLSWQIGSDRTFAVTDMGKYKDIRLSVRLYDGEFS 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1483719 1485141 - BLOR03063 Blo11g00187 66387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00187 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 165 - -
Blo11g00187 213 Coils Coil 92 119 - -
Blo11g00187 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 165 - -
Blo11g00187 213 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Blo11g00187 213 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Blo11g00187 213 MobiDBLite consensus disorder prediction 122 145 - -
Blo11g00187 213 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00187 Blo-Chr11:1483719 Blo15g00606 Blo-Chr15:14709666 4.89E-69 dispersed
Blo11g00187 Blo-Chr11:1483719 Blo04g00218 Blo-Chr4:1690897 9.35E-61 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12889 PF03195 LOB 1.50E-42 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00187 - - twl:120014532 235.728