Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00200 ATGTTAACAATGGCAGGAAATTCTCTTCTCAAACTCATCTCAGTCATCTTCATTCTCATCGCCTTTCTTCCCGGCGAGTCGGTTTCCCAATCGGACTGCGAAGTCGAAGCCGATTCGTGTACCGACAAGGCGAAGGCGTTACCTCTGAAGCTCATTGCGATTTTCTCGATTCTCGTGACGAGTATGATTGGAGTTTGTTTGCCGCTCGTGACTCGTTCGGTGAAGGCGTTGAGCCCGGAGAGGAGCTTGTTCATCATCCTCAAATGCTTCGCCGCCGGAATTATTCTGGCGACCGGATTCATGCACGTTTTGCCGGATTCTTTCGATATGTTGTGGTCTAATTGCTTGAAGGAGAATCCATGGCATAAGTTTCCGTTTACTGGATTTGTAGCTATGCTCTCTGCACTCGTCACCTTAATGGTGGATTCCATGGCTACGAGTCTTTACAGCAAGAAGCATCAGATGGGAGTTCTGCCTGAAAATGATAGAGGAAGTCATGGCGATCAAGAGTCAGCTCCAGGACATGTTCATGGCCACCACCATCTTCCACCTAAAGATTTCGGCGTGTTGGAATTGGGAATTATTGTTCATTCAATTGTGATCGGCCTTTCTCTTGGAGCATCGAACAACACATGCACCATTAAAGGTCTCGTGGCTGCTCTTTGCTTCCATCAAATGTTCGAAGGCATGGGCCTCGGCGGTTGCATTCTCCAGGCCGAGTACAAGTTCATTAAGAAGGCAGCAATGGCTTTCTTCTTCTCGGTCACAACTCCATTTGGGATAGCACTTGGAATTGGACTTTCAAAGACCTACAAAGAGAACAGTCCGAGCGCCTTAATCACCGTCGGATTACTCAACGCGTCGTCCGCCGGCCTTCTGATCTACATGGCTCTGGTTGACCTTCTTGCTGCAGATTTCATGGGAGGTAAGTTGCAGGGAAGTATAAAGCTGCAGATTAAATGCTACATTGCTGTTCTTCTTGGAGCTGGTGGCATGTCTCTAATGGCTAAATGGGCTTGA 1020 47.94 MLTMAGNSLLKLISVIFILIAFLPGESVSQSDCEVEADSCTDKAKALPLKLIAIFSILVTSMIGVCLPLVTRSVKALSPERSLFIILKCFAAGIILATGFMHVLPDSFDMLWSNCLKENPWHKFPFTGFVAMLSALVTLMVDSMATSLYSKKHQMGVLPENDRGSHGDQESAPGHVHGHHHLPPKDFGVLELGIIVHSIVIGLSLGASNNTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKFIKKAAMAFFFSVTTPFGIALGIGLSKTYKENSPSALITVGLLNASSAGLLIYMALVDLLAADFMGGKLQGSIKLQIKCYIAVLLGAGGMSLMAKWA 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1593370 1594724 - BLOR03076 Blo11g00200 66400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00200 339 MobiDBLite consensus disorder prediction 159 179 - -
Blo11g00200 339 PANTHER ZINC TRANSPORTER 10-RELATED 23 339 - -
Blo11g00200 339 TIGRFAM zip: ZIP zinc/iron transport family 33 339 IPR004698 GO:0005385|GO:0016021|GO:0071577
Blo11g00200 339 PANTHER ZINC/IRON TRANSPORTER 23 339 - -
Blo11g00200 339 Pfam ZIP Zinc transporter 189 336 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Blo11g00200 339 Pfam ZIP Zinc transporter 49 171 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01208 Blo-Chr3:38338704 Blo11g00200 Blo-Chr11:1593370 3.16E-73 dispersed
Blo03g01479 Blo-Chr3:41571753 Blo11g00200 Blo-Chr11:1593370 2.35E-10 dispersed
Blo11g00200 Blo-Chr11:1593370 Blo13g00603 Blo-Chr13:28439667 1.05E-101 dispersed
Blo11g00200 Blo-Chr11:1593370 Blo03g00744 Blo-Chr3:31304407 8.61E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00200 K14709 - rcu:8266080 485.723