Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00206 ATGGCCAACGTTACAGCATATGGGAAGTTCAATGAAGCCGATCAGATGACGCTTGATGCTCGCCGGAGAACCAGAAAGAGAATTGCCATTATCGTTTTATCTTCTGTTGTTCTTGTGAGCGTTGTTCTGGCTGCTGTTTTTGGAACTGCAAGCTCCAGAAATGGAAAAAATTCTGACAATGGTGGAGACGCTAACCCTTTCTCTACCTCTGTTAAAGCAGTCTGCGATGAGACTTTGTACCCAAAGAGCTGTTACAGCGCTCTCAATCCTCTGAACAACTCGAGTCAGCTCACGCCACAGGAGATTGCGAAGACCATAATTCAGGCCGCCATTAATGAGCTATCAGAAGTTCCAGACTACATTTTTGAAGACGCTATAAAGAACTCTACTGATAACATGACGATTCAAGCTTTGCAAAACTGCGAGGAGCTTCTGGATTTAGCTCTAGACCACTTGAATATGTCTCTCTCCTCGTCGGACGCTTCTCTAACTGACACCGTTGATGACCTCCGAACATGGCTGAGCTCCGCAACAACGTATCAACAAACCTGCATAGATGGGCTTGCAGACGTTAATGAAACATTGGCAAATTCCATTTCCGGGTACTTGAAAAACTCAACTGAATACTCAAGCAACGGGCTGGCCATCGTCACGTGGCTATCGAGCTTCACAGGGTCTCTGAAACTCCGGCGTCTAATGGGGGAGCCGGAATGGGTTAGCTCGGCAACGAGACGGCTGTTGCAGAGCGATTTGAGGACGCAGGCGAATATAGTGGTGGCCAAAGATGGTTCGGGGAAGTACAAGACGATAATGGCGGCGCTGAATGCGGTGCCAGCAAATAGCAAAACCAGGACAGTGATATACGTGAAGAGTGGGATTTACAACGAGAATGTGATAGTGGCGAAGACGATGTGGAATGTGGTTATGGTGGGAGATGGAATGACTTCAACCATTGTTGCTGCAAGTCTCAACTTCGTTGATGGCACTCCTACTTACTCTACTGCAACTTTCGCTGCAATAGGGCAAAACTTCATGGCAATAGACATGGGTTTCAGCAACACCGCCGGACCAAGCAAGCAACAAGCCGTCGCCCTAATGTCCACCTCCGATCAATCCATCTTCTACCGCTGCCAATTCAACGCCTACCAAGACACTCTCTACGCCAACTCCAACCGCCAGTTCTACCAGGAATGCATCATCTACGGCACCGTTGATTTCATCTTCGGAAACTCCGCCGTCGTCATCCAAAGTTCCTTCATATTCCCCCGATTACCGTTGCAAGGCCAGGAAAACACGATCACCGCTCAGGGAAAGTTTGATCCCAATCAAAACACTGGCACTTCGATTCAGAACTGTACGGTCCTGCCGTTCGGCAACCTAGGTTCCACTCAAACATACCTCGGTCGGCCGTGGAAGGACTACTCGACGACCGTTTATCTTGAGAATAATCTGGGGTCTTTGATTAACCCCGCCGGATGGTTACCATGGGTCGGCAATTCGGCTCCGAGCACCATCTTCTACGCCGAGTTTCAGAATTTCGGTGCTGGGTCTTCAACTGCGAAAAGAGTGAAGTGGAAGGGAGTAAAGAATATTAATGCAGCTCAGGCGACTCTGTTTACGATTTCTTCGTTTCTTCAAGGCGGGAACTGGATTTCGGCCGCCGGAGTTCCTTTCAAAGCCGGTCTTGCGAGGTTCGGGCAGCTTCATCTGAGCGAAATGTCGAGGTTCTGGAAGCCCGGGTCCGAGAAGCCCCGGCTAGTAGACGACGGAGAGGGTGGCGTTCTTTTCTTCTCCCCGTCTCCCGCTGCTTCATCTGGGTTCGGTTATTCGAGTATTGAAAGGCAGAGGCAGAGACTTCCCGTGTACAAGTACCGAAAAGAAATCCTCTATTTGGTCGAAACTCATGCGACTACCATTATTGTTGGCGAGACGGGTAGTGGGAAAACCACCCAAATTCCTCAGTTTCTTAAAGAAGCTGGTTGGGCTGATAGTGGACGTGTAATTGCTTGCACGCAACCCAGACGTTTGGCTGTTCAGGCTGTTGCTTCGAGGGTGGCTGAAGAGATGGGTGTCAAGCTTGGAGAGGAAGTTGGTTATACAATCCGATTCGAAGATCTTACTACTCCGGGTATAACTAGGGTAAAATTTCTCACAGATGGAGTCTTGCTAAGGGAAATGATGGACGATCCTCTTTTGACCAAGTATAGTGTCATTATGGTTGATGAGGCTCATGAGAGATCCATATCAACAGACATGCTATTGGGTCTTTTAAAAAAGATCAAACGGCGTCGACCTGAGCTGCGCTTAATTATATCTTCTGCTACAATTGAAGCAAAATCCATGGCTTCTTTCTTTCAGACCAGGATTGATTTGGCCATTTGTTACCCAACTAGATTAAGTGAACTGAGTTATATAATCATATGGATTAGGTCGCTTGAGTTCAAACTTATGAGCAAAAGACACCAGGAAGTCAAAAATGAAGTGTTTGTACCAAAGGTGGAGCCCGCCATTCTATCAGTCGAGGGTAGAGGGTTTAATGTACAAATTCTTTATGTCGAGGACCCTGTATCAAACTATATTCAGGCTGCTGTGTCAACAGTAATGTCAATTCATGATAAGGAAGCTACGGGAGACATTCTTGTATTTCTAACTGGCCAAGATGATATTGAGACAGCTGTTAATTTACTCACAGATGAATCCCGGAACATTGGCAAAGACTCTCCAGGATTGATTATTTTGCCTCTGTACTCTGGACTTCCTCGTTCTGATCAGGAATTGATATTTTCACCCACTCCTAGAGGGAAGAGGAAAGTAGTGATTTCGACAAATATAGCAGAGACATCATTAACCCTGGAGGGCATTGTCTATGTTGTTGATAGTGGATTCTCAAAGCAGAGGTTCTACAATCCGATATCAGATATTGAAAGCCTCATATTGGCACCGATATCAAAGGCATCTGCTAGGCAAAGGGCTGGTAGAGCTGGAAGAGTTCGACCAGGGAAGTGCTATAGACTATACACAGAGGAATACTTCACTAAGGAGATGTTATCTGGGGGGATTCCAGAAATTCAGAGATCTAATTTAGCTTCTTGTGTAATTCAGTTGAAAGCATTGGGAATCGATAATATACTGGGCTTCGATTGGCCAGCATCTCCATCTCATGAATCTATGGTTCGGGCTCTTGAAGTGCTTTATTCGCTTGGAATCTTAGATGATGATGGCAAGCTTACTTCACCCTTGGGATTTCAAGTGACAGAGATTCCATTAGAACCAATGATCTCGAAAATGATACTAACTTCGAGCCAACTTGGATGCTCGGAGGAGATTCTTACCATTGCTGCTGTTCTCTCCATTCAATCTATTTGGATTTCGAATAGGGGAGCACAAAAAGAACTTGATGAAGCAAGGTTAAGATTTGCTGCTGCTGAGGGTGACCATGTGACCTTCCTGAATGTGTACAAAGGATTTCTACAATCTGGGAAGTCTTCTCAATGGTGTCATAAAAACTGTGTCAATTACCATGCCATGAGAAAAGTTATGGAGGTTAGAGATCAGCTCAGAAAAACAGCACAAAGACTAGGCATTGCCTTGAAATCGTGCGAAGGAGACCTGAAGGCACTCAGAAAGGCAGTGACTGCTGGATTTTTCGCCAATGCTTGTCGGTTAGAAGTGAGTACACCTGTCCATCCCCCCCATCTCTTGTCTATCCTTTTCATGTTCTGGAAGCATTCAGCCATAGTGGGATGTACAAGACTGTTAGAGGCTCCCAAGAAGTCTATATCCACCCCTCATCCGTCTTATTCAGGGGCTCCTCCGTCTGCAAAAGAAGGTAGAATTGGACCAGCGATTGTCGAGCTTCCATTGGAGAAGATTCGAAGGCCGCTGATGAGAACCCGAAATAACGATCCAATCAAAGTGAAGGATCTAATGGACAGCATCGATCAAATTGGTCTCCAAGTGCCAATTGATGTGCTTGAAGTTGATGGAGTTTATTATGGATTCTCAGGGTGTCATCGTTACGAGGCACACCAACGCCTTGGCCTGCCAACAATCCGATGCAAAGTGAGGAAAGGAACTAAAGAAACCCTCAGGTTTGTTCTCATTTCTTCAATTTTTGGTGTTAATAGCTATTGTAATAGCAACTCTAAGACAGATAAATGTCGTTAG 4167 45.93 MANVTAYGKFNEADQMTLDARRRTRKRIAIIVLSSVVLVSVVLAAVFGTASSRNGKNSDNGGDANPFSTSVKAVCDETLYPKSCYSALNPLNNSSQLTPQEIAKTIIQAAINELSEVPDYIFEDAIKNSTDNMTIQALQNCEELLDLALDHLNMSLSSSDASLTDTVDDLRTWLSSATTYQQTCIDGLADVNETLANSISGYLKNSTEYSSNGLAIVTWLSSFTGSLKLRRLMGEPEWVSSATRRLLQSDLRTQANIVVAKDGSGKYKTIMAALNAVPANSKTRTVIYVKSGIYNENVIVAKTMWNVVMVGDGMTSTIVAASLNFVDGTPTYSTATFAAIGQNFMAIDMGFSNTAGPSKQQAVALMSTSDQSIFYRCQFNAYQDTLYANSNRQFYQECIIYGTVDFIFGNSAVVIQSSFIFPRLPLQGQENTITAQGKFDPNQNTGTSIQNCTVLPFGNLGSTQTYLGRPWKDYSTTVYLENNLGSLINPAGWLPWVGNSAPSTIFYAEFQNFGAGSSTAKRVKWKGVKNINAAQATLFTISSFLQGGNWISAAGVPFKAGLARFGQLHLSEMSRFWKPGSEKPRLVDDGEGGVLFFSPSPAASSGFGYSSIERQRQRLPVYKYRKEILYLVETHATTIIVGETGSGKTTQIPQFLKEAGWADSGRVIACTQPRRLAVQAVASRVAEEMGVKLGEEVGYTIRFEDLTTPGITRVKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDMLLGLLKKIKRRRPELRLIISSATIEAKSMASFFQTRIDLAICYPTRLSELSYIIIWIRSLEFKLMSKRHQEVKNEVFVPKVEPAILSVEGRGFNVQILYVEDPVSNYIQAAVSTVMSIHDKEATGDILVFLTGQDDIETAVNLLTDESRNIGKDSPGLIILPLYSGLPRSDQELIFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIESLILAPISKASARQRAGRAGRVRPGKCYRLYTEEYFTKEMLSGGIPEIQRSNLASCVIQLKALGIDNILGFDWPASPSHESMVRALEVLYSLGILDDDGKLTSPLGFQVTEIPLEPMISKMILTSSQLGCSEEILTIAAVLSIQSIWISNRGAQKELDEARLRFAAAEGDHVTFLNVYKGFLQSGKSSQWCHKNCVNYHAMRKVMEVRDQLRKTAQRLGIALKSCEGDLKALRKAVTAGFFANACRLEVSTPVHPPHLLSILFMFWKHSAIVGCTRLLEAPKKSISTPHPSYSGAPPSAKEGRIGPAIVELPLEKIRRPLMRTRNNDPIKVKDLMDSIDQIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKVRKGTKETLRFVLISSIFGVNSYCNSNSKTDKCR 1388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1660987 1673299 - BLOR03082 Blo11g00206 66406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00206 1388 CDD PMEI-like_3 73 222 - -
Blo11g00206 1388 Gene3D - 600 793 IPR027417 -
Blo11g00206 1388 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 629 794 IPR014001 -
Blo11g00206 1388 PANTHER PECTINESTERASE 19 559 - -
Blo11g00206 1388 CDD DEXHc_DHX35 619 787 - -
Blo11g00206 1388 Coils Coil 1125 1145 - -
Blo11g00206 1388 Pfam Helicase associated domain (HA2) 1060 1148 IPR007502 GO:0004386
Blo11g00206 1388 SMART ha2_5 1059 1150 IPR007502 GO:0004386
Blo11g00206 1388 Gene3D - 1281 1371 - -
Blo11g00206 1388 Gene3D - 1047 1201 - -
Blo11g00206 1388 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 24-RELATED 19 559 - -
Blo11g00206 1388 SMART ultradead3 617 808 IPR014001 -
Blo11g00206 1388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 1173 IPR027417 -
Blo11g00206 1388 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Blo11g00206 1388 Pfam ParB/Sulfiredoxin domain 1285 1362 IPR003115 -
Blo11g00206 1388 SMART PMEI_2 66 216 IPR006501 GO:0004857
Blo11g00206 1388 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Blo11g00206 1388 Gene3D - 844 1018 IPR027417 -
Blo11g00206 1388 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 221 IPR035513 -
Blo11g00206 1388 CDD Srx 1283 1367 - -
Blo11g00206 1388 SUPERFAMILY Pectin lyase-like 253 560 IPR011050 -
Blo11g00206 1388 Pfam Plant invertase/pectin methylesterase inhibitor 70 216 IPR006501 GO:0004857
Blo11g00206 1388 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 222 IPR035513 -
Blo11g00206 1388 SMART helicmild6 894 998 IPR001650 -
Blo11g00206 1388 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 863 1039 IPR001650 -
Blo11g00206 1388 TIGRFAM PME_inhib: pectinesterase inhibitor domain 35 220 IPR006501 GO:0004857
Blo11g00206 1388 Gene3D - 251 562 IPR012334 -
Blo11g00206 1388 SUPERFAMILY ParB/Sulfiredoxin 1281 1372 IPR036086 -
Blo11g00206 1388 CDD SF2_C_RHA 845 1006 - -
Blo11g00206 1388 Pfam Pectinesterase 256 547 IPR000070 GO:0030599|GO:0042545
Blo11g00206 1388 SMART ParB_7 1284 1371 IPR003115 -
Blo11g00206 1388 Pfam Helicase conserved C-terminal domain 871 997 IPR001650 -
Blo11g00206 1388 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 736 745 IPR002464 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00294 Blo-Chr3:5808694 Blo11g00206 Blo-Chr11:1660987 3.36E-76 dispersed
Blo09g00447 Blo-Chr9:15557892 Blo11g00206 Blo-Chr11:1660987 5.11E-168 dispersed
Blo11g00206 Blo-Chr11:1660987 Blo15g00330 Blo-Chr15:3864628 4.07E-178 dispersed
Blo11g00206 Blo-Chr11:1660987 Blo11g00207 Blo-Chr11:1679936 0 tandem
Blo01g00914 Blo-Chr1:20071965 Blo11g00206 Blo-Chr11:1660987 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00206 K13117 - mnt:21392202 986.482