Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00207 ATGTCTAACATTACAGGCTATGGGAAGTTCAATGAAGCCGATCAGATGATGCTCGATGCTCGTCGGAGAACCAGAAAGAGAATTGTCATTATCGGTTTGTCTTCTGTTGTGCTTGTGGGCGTTGTTCTAGCTGCTGTTTTTGTAACTGCAAGCTCCAGAAATGGAAAAAATTCTAACAATGGTGGAGACGCTAAGCCTTTCTCTACCTCTGTTAAAGCAGTCTGCGATGAGACTTTGTACCCAAAGAGCTGTTACAGCGCTCTCAATCCTCTGAACAACACGAGTCAGCTCACGCCACAGGAGATTGCGAAGACCATAATTCAGGCCGCCATTAATGAGCTATCAGAAGTTCCAGACTACATTTTCGAAGACGCTATAAAGAACTCTACTGATAACATGACGATTCAAGCTTTGCAAAACTGCGAGGAGCTTCTGGATTTAGCTCTAGACCACTTGAATATGTCTCTCTCCTCGTCGGACGCCTCTCTAACTGACACCATTGATGACATCCGAACATGGCTGAGCTCCGCAACAACGTATCAACAAACCTGCATAGATGGGCTTGAAGACGTTAATGAAACATTGGCAAATTCCATTTCCGGGTACTTGAAAAACTCAACTGAATACTCAAGCAACGGGCTGGCCATCGTCACGTGGCTATCGAGCTTCACAGGGTCTCTGAAACTCCGGCGACTAATGGGGGAGCCGGAGTGGTTGAGCTCGGCGACGAGGCGGCTGTTGCAGAGCGATTTGAGGACGCAGGCGAATATAGTGGTGGCCAAAGATGGTTCGGGGAAGTACAAGACGATAATGGCGGCGCTGAAGGCGGTGCCGGCAAAAAGCAAGACCAGGACGGTGATATACGTGAAGAGTGGGATTTACAACGAGAATGTGATAGTGGCGAAGACGATGTGGAATGTGGTTATGGTGGGAGATGGAATGACTTCAACCATTGTTGCTGCAAGTCTCAACTTCGTTGATGGCACTCCTACTTACTCTACTGCAACTTTCGCTGCAATAGGGCAAAACTTCATGGCAATAGACATGGGTTTCAGCAACACCGCCGGACCAAGCAAGCATCAAGCTGTCGCCCTAATGTCCACCTCCGATCAATCCATCTTCTACCGCTGCCAATTCAACGCCTATCAAGACACTCTCTACGCCAACTCCAACCGCCAGTTCTACCAGGAATGCATCATCTACGGCACCGTCGATTTCATCTTCGGAAACGCCGCCGTCGTCATCCAAAGTTCCTTCCTATTCCCCCGATTACCGTTGCAAGGCCAGGAAAACACGATCACCGCTCAGGGAAAGTTTGATCCCAATCAAAACACAGGCACTTCGATTCAGAACTGTACGATCCTGCCGTTCGGAAACCTAGGTTCCACTCAAACATACCTCGGTCGGCCGTGGAAGGACTACTCGACGACCGTTTATCTTGAGAATAATCTGGGGTCTTTGATTAACCCAGCCGGATGGTTACCATGGGTCGGCAATTCGGCTCCAAGCACCATCTTCTACGCCGAGTTTCAGAATTTCGGTGCTGGGTCTTCGACGGCGAAGAGAGTTAAGTGGAAGGGAGTAAAGAATATTAATGCAGCTCAGGCTACTCTGTTTACGATTTCTTCGTTTCTTCAAGGCGGGAAATGGATTTCGGCCGCCGGAGTTCCTTTCAAAGCCGGTTTGTAA 1689 48.79 MSNITGYGKFNEADQMMLDARRRTRKRIVIIGLSSVVLVGVVLAAVFVTASSRNGKNSNNGGDAKPFSTSVKAVCDETLYPKSCYSALNPLNNTSQLTPQEIAKTIIQAAINELSEVPDYIFEDAIKNSTDNMTIQALQNCEELLDLALDHLNMSLSSSDASLTDTIDDIRTWLSSATTYQQTCIDGLEDVNETLANSISGYLKNSTEYSSNGLAIVTWLSSFTGSLKLRRLMGEPEWLSSATRRLLQSDLRTQANIVVAKDGSGKYKTIMAALKAVPAKSKTRTVIYVKSGIYNENVIVAKTMWNVVMVGDGMTSTIVAASLNFVDGTPTYSTATFAAIGQNFMAIDMGFSNTAGPSKHQAVALMSTSDQSIFYRCQFNAYQDTLYANSNRQFYQECIIYGTVDFIFGNAAVVIQSSFLFPRLPLQGQENTITAQGKFDPNQNTGTSIQNCTILPFGNLGSTQTYLGRPWKDYSTTVYLENNLGSLINPAGWLPWVGNSAPSTIFYAEFQNFGAGSSTAKRVKWKGVKNINAAQATLFTISSFLQGGKWISAAGVPFKAGL 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1679936 1681730 - BLOR03083 Blo11g00207 66407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00207 562 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Blo11g00207 562 Gene3D - 251 562 IPR012334 -
Blo11g00207 562 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 24-RELATED 19 558 - -
Blo11g00207 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 222 IPR035513 -
Blo11g00207 562 TIGRFAM PME_inhib: pectinesterase inhibitor domain 41 220 IPR006501 GO:0004857
Blo11g00207 562 CDD PMEI-like_3 73 222 - -
Blo11g00207 562 PANTHER PECTINESTERASE 19 558 - -
Blo11g00207 562 SMART PMEI_2 66 216 IPR006501 GO:0004857
Blo11g00207 562 Pfam Plant invertase/pectin methylesterase inhibitor 70 216 IPR006501 GO:0004857
Blo11g00207 562 Pfam Pectinesterase 256 547 IPR000070 GO:0030599|GO:0042545
Blo11g00207 562 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Blo11g00207 562 SUPERFAMILY Pectin lyase-like 253 561 IPR011050 -
Blo11g00207 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 221 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00914 Blo-Chr1:20071965 Blo11g00207 Blo-Chr11:1679936 0 dispersed
Blo07g00808 Blo-Chr7:25954790 Blo11g00207 Blo-Chr11:1679936 1.95E-151 dispersed
Blo10g00956 Blo-Chr10:28639247 Blo11g00207 Blo-Chr11:1679936 4.69E-66 dispersed
Blo11g00207 Blo-Chr11:1679936 Blo17g00653 Blo-Chr17:15444902 2.04E-149 dispersed
Blo11g00206 Blo-Chr11:1660987 Blo11g00207 Blo-Chr11:1679936 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00207 - - mcha:111010791 716.842