Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00225 | ATGAGGCTTTCTTCAGCTGGTTTCAGTCCTCAATCCCATGAAGGAGAGATGAAGGTGTTAAATTCTGAGCTATGGCATGCTTGTGCCGGTCCTCTGGTTTCTCTACCTGCTATTGGAAATAGAGTCGTGTATTTTCCTCAAGGTCATAGTGAACAGGCAGATGTTGAGACAGATGAAGTGTATGCTCAAATGACATTGCAGCCACTAAGTCAACAAGAGCAAAAGGAAACTTACCTTCCAGCTGAGTTTGGTGCTCCTAGTAAACAGCCTACAAATTATTTCTGCAAAACCTTAACAGCGAGCGATACGAGCACTCATGGAGGTTTCTCTGTTCCTCGCCGGGCTGCTGAAAAAGTGTTTCCTCCATTGGATTTCTCTCAGCAGCCCCCCGTTCAAGAATTAATGGCGAGGGATCTTCACGATAATGAATGGAAATTTAGACATATATTTCGTGGTAGGAATGAAAAGAATCAATTACTCCTTGGCATTCGACGTGCTAATCGACCGCAAACCATGATGCCTTCCTCAGTTTTATCGTGTGATAGCATGCACTTGGGCCTTCTTGCCGCCGCCGCTCATGCAGCTGCAACAAATAGTCGATTCACCATATTTTATAACCCAAGGGCGAGCCCAACTGAATTCGTAATACCGTTTGCCAAGTACGTAAAGGCTGTCTACAACACTCGTGTCTCTGTTGGAATGCGGTTTAGGGCGATGTTCGAAACGGAAGAATCAAGTGTTCGTCGGTATGTTGGATGGGATGAGTCAACTGCAGGAGAGAGGCAGCCGAGAGTGTCGTTGTGGGAGATTGAACCCTTGACGACATTCCCAATGTATCCTCCTCCGTTTTCCCTTCGGCTAAAGCGGCCATGGCCTATTGGTTTACCCTCTGTCAATGGAATCAATGAAAATGATCTGGGAATGAATTCTACCCACTTGTGGCTAGGTGGAGATAATGAATCTCTTAACTTCAATGGAGGAGTTTCGCCATGGATGCAACCGAGGCTTGATTCCTCCATGCTCAGTCTGCAGTCTGATGTGTATCAATCTATGGCTGCTTCTGCAGCACTGGAGAAGATGAAGATGATAAACTCATCCAAATTACCTTTCCAATTTCCATTTTCTCCACAAGCTCAGCAGGCCTTCCTTCCAACCATGGCGGAAAATGGACCTCATCAGGTCTTCCTTCCAACCATGGTGGAAAATGGACCTGATTCTCAACCTCAGATTCAAAAACTGCCTCAAATTTTCCAGCAAAAATTGCAGATTCCTAATGAAAGATTGGGAACTGATTCTTATCATGGTTTATTGAGTCCATTTCCTCAAAATGAAGATGATTCATCTCATCGACTCAACCTTCCAAGAAATTACGGTCTGATTCCTTCTTCAACTTGGCCTTCTAAGCGGGCTGCTCTTGATCCTCTGTTTCCATTTGTACTTCCTCAAGTAGAAGAACATTTGGTGTCATTGCCACCATTTCCGGGTCGAGAGTGCTCGATTGATCAACAAAACCATCTTTTATATGGTTTGAATATCAAACCAAAAAGTTCCCCATTTTTTTCTAATTTCATGGCTTCCAATGGTAGCGATTACCCCAATAATGGTGTAATGACACCTTCCACTTCCATTGATGATCCGGGATTCTTGTCTTCAAAAAACATGTCCCAAGAAGTCCACCCATCATCCAGAAACTTCGTCAAGGTTTATAAATCACAGTCCTTTGGTAGATCATTGGACATTACCAAGTTTAATAGCTACCCCGAGCTACGCAGTGAGCTTGATCAAATGTTTAGCTTGGATGGTGTGTTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTATTCGTCGATCGGGAGAATGAAATTCTTCTCCTCGGTGATGGCCCGTGGGCGGAGTTCGTAAATAACGTCTGGTGTATAAAAATATTGTCGCCTCAAGAAGTGCTCGAAATGGGAAAACCCGATGCAAAGCTTTTGAACACACTGTCGATTCAGAGGCGCTCGGGCGGAAGTTGCGATGAGAATGTGATCCGACAAAATTCGAGAAACTCGAGCAGCGGATTAACTTCCGTTGGGTCCCTAGACAACTGA | 2091 | 44.81 | MRLSSAGFSPQSHEGEMKVLNSELWHACAGPLVSLPAIGNRVVYFPQGHSEQADVETDEVYAQMTLQPLSQQEQKETYLPAEFGAPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELMARDLHDNEWKFRHIFRGRNEKNQLLLGIRRANRPQTMMPSSVLSCDSMHLGLLAAAAHAAATNSRFTIFYNPRASPTEFVIPFAKYVKAVYNTRVSVGMRFRAMFETEESSVRRYVGWDESTAGERQPRVSLWEIEPLTTFPMYPPPFSLRLKRPWPIGLPSVNGINENDLGMNSTHLWLGGDNESLNFNGGVSPWMQPRLDSSMLSLQSDVYQSMAASAALEKMKMINSSKLPFQFPFSPQAQQAFLPTMAENGPHQVFLPTMVENGPDSQPQIQKLPQIFQQKLQIPNERLGTDSYHGLLSPFPQNEDDSSHRLNLPRNYGLIPSSTWPSKRAALDPLFPFVLPQVEEHLVSLPPFPGRECSIDQQNHLLYGLNIKPKSSPFFSNFMASNGSDYPNNGVMTPSTSIDDPGFLSSKNMSQEVHPSSRNFVKVYKSQSFGRSLDITKFNSYPELRSELDQMFSLDGVLEDPLRSGWQLVFVDRENEILLLGDGPWAEFVNNVWCIKILSPQEVLEMGKPDAKLLNTLSIQRRSGGSCDENVIRQNSRNSSSGLTSVGSLDN | 696 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1827807 | 1832993 | + | BLOR03101 | Blo11g00225 | 66425 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 6 | 1 | 52 | - | - | |
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 6 | 53 | 153 | - | - | |
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 6 | 154 | 252 | - | - | |
Blo11g00225 | 696 | CDD | B3_DNA | 93 | 162 | IPR003340 | GO:0003677 | |
Blo11g00225 | 696 | MobiDBLite | consensus disorder prediction | 675 | 696 | - | - | |
Blo11g00225 | 696 | ProSiteProfiles | PB1 domain profile. | 563 | 647 | IPR000270 | GO:0005515 | |
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 251 | 387 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Blo11g00225 | 696 | SUPERFAMILY | DNA-binding pseudobarrel domain | 78 | 194 | IPR015300 | - | |
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 6 | 251 | 387 | - | - | |
Blo11g00225 | 696 | Gene3D | - | 92 | 169 | IPR015300 | - | |
Blo11g00225 | 696 | Pfam | AUX/IAA family | 552 | 648 | IPR033389 | - | |
Blo11g00225 | 696 | Gene3D | - | 559 | 652 | - | - | |
Blo11g00225 | 696 | Pfam | Auxin response factor | 191 | 253 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 6 | 515 | 673 | - | - | |
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 515 | 673 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Blo11g00225 | 696 | Gene3D | - | 250 | 277 | - | - | |
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 1 | 52 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 53 | 153 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Blo11g00225 | 696 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 154 | 252 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo08g00564 | Blo11g00225 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo10g00229 | Blo-Chr10:3069226 | Blo11g00225 | Blo-Chr11:1827807 | 0 | dispersed | |
Blo11g00225 | Blo-Chr11:1827807 | Blo16g00853 | Blo-Chr16:35921520 | 5.35E-24 | dispersed | |
Blo11g00225 | Blo-Chr11:1827807 | Blo11g00372 | Blo-Chr11:3154567 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12891 | PF02309 | AUX_IAA | 5.50E-06 | CL0072 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00225 | - | - | egr:104440759 | 839.721 |