Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00227 ATGCCCCGCGTCTCACCGCGGCGATCCACCGATAACTCCTTCAAGCGCTTTGTTTTTTCCAGAGCAGAAACCTTGTATGCGGACGACTTCTCCGACGTTTTTGGCGGTCCGCCTAGGAGCGTTCTGTCGCGGCAATTCTCCGGTGGCTTTGAGCTTAAACAGTCGGATTTTTTCTACGATGAGGTCTTCCAGCCTCCGGAATTCGCTTCTAATGTGACTAACGGCGGAAGGAGCTTGCCGTCGTTTCGGATTCCTGAGAAGGAGGCTGCGTTTTACAGCGATGTATTTGGATCGGACTATGAGAGCCGGTGGAGAGAACGATCGGGCCAGAATTCAAGATCGAAGTCGAATTCTTCATCTATTTTGAGCTCGGAGCCCAGCCCTCTCCGGTCGACGATCGGAGATGACGTCGCCTTCTCTGCCTTTGCTTCAAAGCTTAGACCAATGAATGTTGTTCCATGTGGAGGGAACTCCCCTCAAATGATGCATGAAGAACCCCAAAGGAAACAAGACAGACCAGCTTTTCAATGCAATCGCTCTGCTTACAAAGAAAATCAATTTCCGGGATATGATTTCAAGGAAAGCTTTATAAGCCCGAACAATGGATTTTCACGACACTTGTTGTCTCCTGAAACAATTAGTCTAGAACGTCCAAATTCATATCAAAGTAATAAAGTATCTGCTGATGATGTAGAGGTTAACTCTGCTATATCATCTGCTGCCTCTTCACTATGTCAAGTCCTCGAGGATAAGGCTGCTATGCAAGGTAATGTCATGTCAGAAGAAGATGAAGATGAGGTTATGAGCTCTTATGTTATCGAGATTAACTCGGATTATAGAGCGGAAACTCCAGAACGAGGGGCAGTTGATGAGGCGATTGCTTGGGCGAAGGAGATGTTTCAAAGAAAGACGAGTGAGACAAATTTGAGCTCCGAGTTAAGAGGAGATAACGAGCAGTGTGTTGAAGTGAAAGGAAGTTCTAATTCTAGTGAACTTGCTGAACAACAATTGAATGAAAGTGGAATTAGTCAAGTTTCACAGGTAAAAAGTAATTTTATGAATAAGATATTGACTGATTCCTTCCTGGTATCTTATTTTTTGTCCAAATGGCTTGTTTACTGTACTCTCTTCTGGCTGAGGAACAAGTTTATTATACTTAAACTACAGAAAATAATGGAGAGATTGGATGAAGACATAAAGCTGTGGTCAGGTGGCCAAGAAACCAACATCCGTTTGCTCCTTTCTACCCTGCATCGAATTCTCTGGCCCAATAGTGGGTGGCATGCAATCTCTGTAACAAGTCTAATAGGAACCTCGCAAGTGAAGAAGGCTTATCAGAAAGCAAGATTGTGTCTCCATCCAGACAAGCTGCAGCAAAGAGGAGCAACTGAACCACAAAAATATGTAGCAGAAAAGGCTTTCTCCATTCTTCAGTCTATGATCTCCTCTGTTGGATCTGCATGCATGCAAGAGCATTGTGCTCGAATCGTGATTCTCGACGCGATGGAATGGTTGCGCCGGCGATTCGACGGTTCGGAGCTATCAGAGGTTAACGTGAAGCTTTTGGAGATAAACCATGACCACCAACCCTCTCCGGTGACAACGCCGACGGAACAAGAGAGCGAGTGCACAGTCCGAGAGCAAGACCGGTTCATGCCGATCGCAAACGTGATAAGAATAATGCGCAAAATCCTCCCTCCCCATGCAAAAATCTCCGACGACGCGAAAGAAACGATCCAAGAATGCGTCTCCGAGTACATCAGCTTCGTCACCGGCGAAGCCAACGAGCGGTGCCAGAGGGAGCAGCGGAAGACCATCACCGCCGAGGACGTGCTCTGGGCAATGAGCAAGCTCGGTTTCGACGACTACATCGAGCCTCTCACTCTCTACCTCCACCATTACCGAGAAATGGAGGGCGTCAAAAGAACCGCGGACTATGGCGGAGGAGGAGGAGGATTAGGGCTCTCTACAGCGTTTCATTTAGGCCACCACCGCCATGGGTTTTTGGGGTACTTGAAGGATTCACCTTCTTCTCTGCAAGCCATGCCAAAGGAAGAGCTCCATCCCCAGCCAGCCGGCTATACTATAAGTAATAAATCAGCAAATATAAACTGA 2115 47.04 MPRVSPRRSTDNSFKRFVFSRAETLYADDFSDVFGGPPRSVLSRQFSGGFELKQSDFFYDEVFQPPEFASNVTNGGRSLPSFRIPEKEAAFYSDVFGSDYESRWRERSGQNSRSKSNSSSILSSEPSPLRSTIGDDVAFSAFASKLRPMNVVPCGGNSPQMMHEEPQRKQDRPAFQCNRSAYKENQFPGYDFKESFISPNNGFSRHLLSPETISLERPNSYQSNKVSADDVEVNSAISSAASSLCQVLEDKAAMQGNVMSEEDEDEVMSSYVIEINSDYRAETPERGAVDEAIAWAKEMFQRKTSETNLSSELRGDNEQCVEVKGSSNSSELAEQQLNESGISQVSQVKSNFMNKILTDSFLVSYFLSKWLVYCTLFWLRNKFIILKLQKIMERLDEDIKLWSGGQETNIRLLLSTLHRILWPNSGWHAISVTSLIGTSQVKKAYQKARLCLHPDKLQQRGATEPQKYVAEKAFSILQSMISSVGSACMQEHCARIVILDAMEWLRRRFDGSELSEVNVKLLEINHDHQPSPVTTPTEQESECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHHYREMEGVKRTADYGGGGGGLGLSTAFHLGHHRHGFLGYLKDSPSSLQAMPKEELHPQPAGYTISNKSANIN 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1847022 1852128 + BLOR03103 Blo11g00227 66427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00227 704 Gene3D Histone, subunit A 539 648 IPR009072 GO:0046982
Blo11g00227 704 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 551 615 IPR003958 -
Blo11g00227 704 MobiDBLite consensus disorder prediction 111 129 - -
Blo11g00227 704 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 4 483 - -
Blo11g00227 704 Gene3D DnaJ domain 387 486 IPR036869 -
Blo11g00227 704 PRINTS CCAAT-binding transcription factor subunit A signature 598 616 - -
Blo11g00227 704 PRINTS CCAAT-binding transcription factor subunit A signature 617 635 - -
Blo11g00227 704 PRINTS CCAAT-binding transcription factor subunit A signature 579 597 - -
Blo11g00227 704 SUPERFAMILY Chaperone J-domain 388 478 IPR036869 -
Blo11g00227 704 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 483 - -
Blo11g00227 704 MobiDBLite consensus disorder prediction 103 129 - -
Blo11g00227 704 SUPERFAMILY Histone-fold 548 648 IPR009072 GO:0046982
Blo11g00227 704 ProSitePatterns NF-YB/HAP3 subunit signature. 582 598 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00926 Blo11g00227 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01194 Blo-Chr6:35462669 Blo11g00227 Blo-Chr11:1847022 7.89E-13 dispersed
Blo11g00227 Blo-Chr11:1847022 Blo14g00737 Blo-Chr14:19706369 3.62E-105 dispersed
Blo16g00147 Blo-Chr16:3246930 Blo11g00227 Blo-Chr11:1847022 1.57E-18 dispersed
Blo01g00926 Blo-Chr1:21484906 Blo11g00227 Blo-Chr11:1847022 1.15E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12892 PF00808 CBFD_NFYB_HMF 4.10E-25 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00227 - - csv:101213807 419.853