Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00260 ATGGAGTCGAAGATTCCCATCAGGTTCGGGTTAGGGAGGCAGTCGTCTTTGGCGACGGACAAGCACATAGGAGAAACGGACGAGCTGGTGGACGCGGAAATGATAGATCCTGGCGTGAAACTGATGTATTTGGCTAATGAAGGTGATCTTGAAGGAATCTCTGAGCTTTTGGATTCTGGAACCGACGTCAATTTCCGCGATATTGATGGCCGGACGGCTCTCCATATTTCAGCATGCCAGGGATATTTTGACGTCGTTGATTTGTTGCTTCAAAGAGGAGCTGAGGTTGACCCTAAAGATTGCTGGGGTAGCACGCCTCTTGCAGATGCCATTCACTACAAAAATCATAATGTGATTCAATTGTTGGAGAAACATGGTGCAAAACACCCGATGGCTCCAATGCATGTAAAACATGCTCGTGAAGTACCCGAATATGAAATTGACCCGAAAGAGATTGATTTTACGAACAGTGTTGATATAACCAAGGGAACATTTTGTGTGGCATCATGGCGTGGCATAGAAGTTGCTGTAAAAACTTTTGAGGAGGATGTGATTGATGAGGAGGATAAAGTGAGGGCATTTCGTGACGAGCTTGCACTTCTTCAGAAGTTAAGACATCCGAACGTTGTACAGTTTCTAGGTGCAGTGACTCAGAGTAGCCCTATGATGATTGTTACAGAATATTTACCCAAGGGAGATCTTCTCGAATTCTTGAGAAAGAACGGTGCATTAAAACCAACAGTAGCTGTTAGATTTGCTCTTGATATTGCCAGGGGAATGAGTTACTTGCATGAGAATAAGCCTGCACCAATAATTCACTGTGATCTTGAGCCTTCAAATATATTGCGGGATGACTCTGGGCTGTTGAAAGTCGCAGATTTTGGAATTAGCAAGTTGTTGACAGTTAAAGAAAAGAAGCCTCTAACATGCCAAGTCACTTCCTGCCGATATGTGGCTCCAGAGGTTTTCAAAAATGATGGGTACGATACAAAGGTGGATGTATTCTCATTTGCTTTAATTCTACAGGAGATGATTGAAGGCTGCCCACCATTTTCTGGTAAGAGAGAAAATGAAGTTCGAGAAGCATATGCTGCAGGAGAACGTCCACCTTTCAAAGCCCCATCTAAACATTACGCTCATGGACTTAGAGAGTTGATTGAGGAGTGCTGGAGTAAGAGTCCAGCCTACAGACCAACTTTTAGGCAGATAATAAGAAGGCTGCAATCCATCTCTTACAGTCTTGGTCACAAGAGGCGTTGGACGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACCTGCATGTGTGGTTTCTGCTTTCAAATATGATATGTTACATATAGACTTGCCCGATATCTTCAACCGAATTACGTATTTTCGGTCAGACGCATATGATGATCTCCTTGCCTATTTTCCCATGTCTATCCTTCTAAACATTCATGTTGGTCCCCTTGCAGGTTAG 1473 43.79 MESKIPIRFGLGRQSSLATDKHIGETDELVDAEMIDPGVKLMYLANEGDLEGISELLDSGTDVNFRDIDGRTALHISACQGYFDVVDLLLQRGAEVDPKDCWGSTPLADAIHYKNHNVIQLLEKHGAKHPMAPMHVKHAREVPEYEIDPKEIDFTNSVDITKGTFCVASWRGIEVAVKTFEEDVIDEEDKVRAFRDELALLQKLRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLLEFLRKNGALKPTVAVRFALDIARGMSYLHENKPAPIIHCDLEPSNILRDDSGLLKVADFGISKLLTVKEKKPLTCQVTSCRYVAPEVFKNDGYDTKVDVFSFALILQEMIEGCPPFSGKRENEVREAYAAGERPPFKAPSKHYAHGLRELIEECWSKSPAYRPTFRQIIRRLQSISYSLGHKRRWTVSLSLSLSLSLSLSQPACVVSAFKYDMLHIDLPDIFNRITYFRSDAYDDLLAYFPMSILLNIHVGPLAG 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2080762 2084301 - BLOR03136 Blo11g00260 66460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00260 490 Gene3D - 13 143 IPR036770 -
Blo11g00260 490 CDD STKc_MAP3K-like 160 407 - -
Blo11g00260 490 PIRSF ILK 2 428 - -
Blo11g00260 490 SUPERFAMILY Protein kinase-like (PK-like) 163 408 IPR011009 -
Blo11g00260 490 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 423 - -
Blo11g00260 490 SUPERFAMILY Ankyrin repeat 40 131 IPR036770 -
Blo11g00260 490 SMART ANK_2a 102 131 IPR002110 GO:0005515
Blo11g00260 490 SMART ANK_2a 69 98 IPR002110 GO:0005515
Blo11g00260 490 SMART ANK_2a 37 65 IPR002110 GO:0005515
Blo11g00260 490 Gene3D Transferase(Phosphotransferase) domain 1 230 424 - -
Blo11g00260 490 ProSiteProfiles Ankyrin repeat region circular profile. 69 100 - -
Blo11g00260 490 ProSiteProfiles Protein kinase domain profile. 119 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00260 490 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 423 - -
Blo11g00260 490 Coils Coil 177 197 - -
Blo11g00260 490 Pfam Ankyrin repeats (3 copies) 41 128 IPR002110 GO:0005515
Blo11g00260 490 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Blo11g00260 490 Gene3D Phosphorylase Kinase; domain 1 146 229 - -
Blo11g00260 490 Pfam Protein tyrosine and serine/threonine kinase 168 407 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00917 Blo-Chr6:32426851 Blo11g00260 Blo-Chr11:2080762 2.17E-98 dispersed
Blo11g00260 Blo-Chr11:2080762 Blo13g00206 Blo-Chr13:8500333 2.42E-130 dispersed
Blo11g00260 Blo-Chr11:2080762 Blo16g01104 Blo-Chr16:39531690 3.91E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84527 PF07714 PK_Tyr_Ser-Thr 3.50E-54 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00260 - - csv:101205123 661.759