Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00268 ATGGCGGATTCGAGACCAAGAAGACTGAGAGGGCATACTGCGACTGCAACGTGCTGCATCGCCTCGAGGGACCGCCCTGGTCTAGTCGCTACTTCCGGTGAGGATGGCTGTGTTTGCTGGTTTGATATGCGATGCAAAGATGCTGTATGCATTATGGATATTTCAAAGGAGCCTATTTCATCTCTATGTTTCAAACAAGGGAATGAAGATATCATTTACGTATCGACCGGAAAAGAAGTCAAATCTTTTGATGTGCATCAGGCTACCTCATGGAAACCATTGGAAACTTATAACTTCAATAAAGAGGAGATAAATCAGGTAGTTGCATGTGGCTCCAAGTCTTCTTTTCTGGCTGCAGCTGATGATGGGGGTGATGTTAAGTTCATTGATTTACAACAACACTGCGTTTATAAAACGTTAAGAGCTGGCCATACAAGTATTTGTAGCAGTGTTCAATTCCTTCCTTGGAGACCTTGGGAAGTGTGTTGTCATATGGCTAAAAGATTTATTTCTTTTGCAGTTATTACTGGAGGTCTTGATTCAAAGCTCATTATGTGGGACTTCTCCAGAGGGCGCCCGTACAAGACTATCGATTTTGGTTTACCTGAAAAAAACAGTAGTGTGAGTGGTGGAGTTCAGTGCTTCAATCCTGCATTTGTTCATGCTATAGTGGTGCCTGAAGTTGATATGTTGGACAAATTGGGACAGATTTGTGTCGTGGCGAAGGGTGATGGTACCGTTAATGTCATCAATATCAAATCCGAACTTGATTCTGAGCAGTCAAAAAGTTCAAAAAAGCCGGGAAGATCCAAAACAAGATCAAAGGATGTTAGCACAGATGGAGAACAAGCTGTAGGAAAGAGTCTACAATTTGATTACTCTATTGGTGGTCATACTGCCGGAGTGTCTTGCGTGGCTTTGTCTCAATTTGGGGATAGAGGGAAATTCATAATTTCAGGTGGGAATGATAAGTTCGTAAAGGTCTGGAATTGGCCCGGGTTTTCTGAAGCAGCCGACAAAAGTAATCTTCTACAGTTAAACATCGATGCGAAGAAAAAGGTCAATTGGCTGTGTACAACTCCATCCGAAACCGAAAACCTTGTGGTTTGTGATACAACTAAAGTAGTGAAGAATCGCCCTGCGAATCAAGTCCTCAACTCTTTTATCAAAATGATGGCGGCCGAGGCTCCATTGTGCCATAACTGCGGTGAGCAAGTTGGGTTTGATAAAAATGGAGAGATCCTTGTCGCCTGCCATGACTGCAATTTTCCCATTTGCAAAGTCTGTGTGGAGTTTGAGATCAAGGAAGGCCGTGAATTTTGCTTGCGATGCGGAACCCCTTACTTTGTAGTCGTTGAGGAGAATATTATCCGTTTTGGTCCCAATTTGCATCAGTTTATTCCTGGACTAATAATTACTGAAACAAATGTATCAGGTGATCGATCAACGATGGCAGGCCACCTCAACGATCCTCAGGATGGTGGAATTCATGCAAGACATGTTAGTAGCGTGTCAACTGTGGAAAGTGAAGTAAACGAGGATTCAGGTAAGCCAATATGGAAGAACAGAGTGGAGAGTTGGAAGGAGAAGGAGAAGAAGAACAAGAAGAAAAAGACAGCTGTGGCTAAGGCTGACATAAATAAAGAGGCTGGAATTCCTTCTCAACAGCAAATGGAAGAGAAAGAGGCATTGGAGGCTGGACAACCACTTTCAGCCATTGTTCCCATTCCATCCAGTAAAGTAACGCCTTACAGAATTGTGATAGTAATGCGATTGATCATTCTGGCTCTTTTCTTCCATTATAGAGTCACTAATGCTGTCGACAGTGCATTTGGTCTATGGCTCACTTCTGTTATATGTGAGATATGGTTTGCTGTCTCTTGGGTGCTAGATCAGTTCCCTAAATGGTATCCTATCGATAGGGAGACATTCATTGACAGGCTATCAGAGAGGTTTGAAAGAGAGGGTGAGATCTCTGAGCTTGCTGCTGTGGATTTCTTCGTGAGTACGGTCGATCCCTTGAAAGAACCGCCGCTCATCACTGCCAATACTGTGCTTTCGATCCTTGCTGTGGACTACCCCGTTGATAAAGTCTCCTGCTATGTATCTGATGATGGCGCTGCGATGCTCACATTTGAATCTCTCGTCGAAACATCTGACTTTGCTCGGAAGTGGGTTCCATTCTGCAAGAAATTTTCCATTGAACCTCGCGCGCCGGAGTTCTACTTTTCGCAGAAGATTGATTATTTGAGGGATAAAGTGCAACCTTCATTTGTGAAGGAACGCAGAGCTATGAAAAGAGATTATGAAGAGTTCAAAGTCCGAATCAATGCTTTAGTAGCAAAAGCTCAGAAAACACCAGACGAAGGCTGGACAATGCAAGACGGCACACCTTGGCCTGGAAATAACACCCGCGACCACCCCGGGATGATTCAGGTTTTTCTTGGCAATACCGGGGCCCATGACCTTGATGGGGATGAACTTCCGCGTCTGGTATATGTCTCGAGAGAGAAGAGACCAGGCTACCAACACCACAAAAAAGCAGGCGCAGAAAATGCTCTTGTAAGAGTGTCTGCAGTTCTGACAAATGCTCCTTACATTCTCAATCTTGACTGTGATCACTATGTCAACAATAGCAAGGCAATTAGGGAGGCAATGTGTTTCTTGATGGACCCACAAGTTGGTCGGGATCTCTGCTACGTGCAGTTTCCTCAGAGATTTGATGGCATTGATCGCAGCGACAGATATGCCAATCGCAACACTGTTTTCTTTGATGTTAACATGAAAGGATTGGACGGAATCCAGGGACCGGTTTATGTCGGTACTGGTTGCGTGTTCAACAGGCAAGCTCTTTATGGCTATGGCCCTCCTTCTATGCCTAGTTTACCCAAGGCCTCCTCATCTTGCTCGTGGTGTGGCTGCTGCCCCTCGAAGAAGCCCTCAAAAGATGTCTCCGAAGTTTATCGAGATGCGAAACGAGAAGAGCTTGATGCTGCAATCTTTAACCTCCGAGAAATCGATAATTATGATGAATATGAGAGGTCAATGCTGATCTCCCAAATGAGCTTCGAGAAGACGTTCGGCTTGTCCTCTGTATTTATCGAGTCTACAATAATGGAAAACGGAGGCGTGGCTGAATCTGCTAACCCGTCAACGTTGATCAAAGAAGCAATTCATGTTATTAGTTGTGGTTATGAAGAGAAGACAGCTTGGGGAAAAGAGATTGGTTGGATATACGGATCAGTCACTGAGGATATCTTAACTGGCTTTAAAATGCACTGCCGGGGATGGAGGTCGGTTTACTGCATGCCCTTGAGGCCTGCATTCAAAGGATCGGCGCCCATTAACCTTTCGGATCGGCTGCACCAAGTTCTTCGATGGGCACTTGGATCCGTTGAGATTTTTCTGAGCAGGCACTGCCCTCTTTGGTATGGATTCTCCGGCGGCCGCCTCAAATGGCTTCAGAGATTGGCATACGTCAACACAATTGTCTACCCGTTTACCTCGCTTCCTCTCATTGCTTATTGTTCATTGCCGGCGATTTGCCTCTTGACTGGAAAATTCATTATTCCAACGCTCTCAAACTTGGCAAGCCTCCTGTTTCTTGGCCTCTTCATCTCCATCATCGTCACAAGCGTTCTTGAGCTGCGATGGAGTGGGGTCAGCATTGAGGATTTGTGGCGAAACGAGCAATTCTGGGTCATTGGAGGCGTATCGGCTCATCTCTTTGCCGTCTTTCAAGGATTTCTGAAGATGTTGGCCGGAATAGACACCAATTTCACTGTCACTGCAAAGGCTGCCGATGATACTGAATTTGGAGAGCTGTACACGGTCAAATGGACAACCCTTTTGATTGCTCCAACAACTCTGCTCATCGTCAACATGGTTGGCGTTGTGGCTGGATTCTCTGATGCTCTCAATGGAGGATACGAAGCTTGGGGCCCACTTTTCGGCAAGGTGTTTTTCGCTTTCTGGGTCATTTTCCATCTTTATCCCTTCCTCAAAGGTCTCATGGGTCGTCAAAATCGAACTCCGACGATTGTTGTTCTGTGGTCTGTCCTGTTGGCCTCCATCTTCTCCCTCATCTGGGTCAAGATCGACCCGTTTGTGAGTAAAGTGGACAGTTCAACCATAGCCCAGAGCTGTGTTTCCATCGACTGTTAA 4164 45.44 MADSRPRRLRGHTATATCCIASRDRPGLVATSGEDGCVCWFDMRCKDAVCIMDISKEPISSLCFKQGNEDIIYVSTGKEVKSFDVHQATSWKPLETYNFNKEEINQVVACGSKSSFLAAADDGGDVKFIDLQQHCVYKTLRAGHTSICSSVQFLPWRPWEVCCHMAKRFISFAVITGGLDSKLIMWDFSRGRPYKTIDFGLPEKNSSVSGGVQCFNPAFVHAIVVPEVDMLDKLGQICVVAKGDGTVNVINIKSELDSEQSKSSKKPGRSKTRSKDVSTDGEQAVGKSLQFDYSIGGHTAGVSCVALSQFGDRGKFIISGGNDKFVKVWNWPGFSEAADKSNLLQLNIDAKKKVNWLCTTPSETENLVVCDTTKVVKNRPANQVLNSFIKMMAAEAPLCHNCGEQVGFDKNGEILVACHDCNFPICKVCVEFEIKEGREFCLRCGTPYFVVVEENIIRFGPNLHQFIPGLIITETNVSGDRSTMAGHLNDPQDGGIHARHVSSVSTVESEVNEDSGKPIWKNRVESWKEKEKKNKKKKTAVAKADINKEAGIPSQQQMEEKEALEAGQPLSAIVPIPSSKVTPYRIVIVMRLIILALFFHYRVTNAVDSAFGLWLTSVICEIWFAVSWVLDQFPKWYPIDRETFIDRLSERFEREGEISELAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETSDFARKWVPFCKKFSIEPRAPEFYFSQKIDYLRDKVQPSFVKERRAMKRDYEEFKVRINALVAKAQKTPDEGWTMQDGTPWPGNNTRDHPGMIQVFLGNTGAHDLDGDELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAIREAMCFLMDPQVGRDLCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSMPSLPKASSSCSWCGCCPSKKPSKDVSEVYRDAKREELDAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTIMENGGVAESANPSTLIKEAIHVISCGYEEKTAWGKEIGWIYGSVTEDILTGFKMHCRGWRSVYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFSGGRLKWLQRLAYVNTIVYPFTSLPLIAYCSLPAICLLTGKFIIPTLSNLASLLFLGLFISIIVTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDTEFGELYTVKWTTLLIAPTTLLIVNMVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLIWVKIDPFVSKVDSSTIAQSCVSIDC 1387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2164342 2174085 + BLOR03144 Blo11g00268 66468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00268 1387 SUPERFAMILY WD40 repeat-like 7 361 IPR036322 GO:0005515
Blo11g00268 1387 Pfam WD domain, G-beta repeat 294 330 IPR001680 GO:0005515
Blo11g00268 1387 SUPERFAMILY RING/U-box 390 449 - -
Blo11g00268 1387 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 330 IPR001680 GO:0005515
Blo11g00268 1387 Pfam Cellulose synthase 664 1377 IPR005150 GO:0016020|GO:0016760|GO:0030244
Blo11g00268 1387 SMART WD40_4 90 130 IPR001680 GO:0005515
Blo11g00268 1387 SMART WD40_4 288 330 IPR001680 GO:0005515
Blo11g00268 1387 SMART WD40_4 47 84 IPR001680 GO:0005515
Blo11g00268 1387 SMART WD40_4 2 42 IPR001680 GO:0005515
Blo11g00268 1387 SMART WD40_4 133 187 IPR001680 GO:0005515
Blo11g00268 1387 Pfam Zinc-binding RING-finger 395 448 IPR027934 -
Blo11g00268 1387 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 392 1387 - -
Blo11g00268 1387 MobiDBLite consensus disorder prediction 258 281 - -
Blo11g00268 1387 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 392 1387 - -
Blo11g00268 1387 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 295 330 - -
Blo11g00268 1387 Gene3D - 289 383 IPR015943 GO:0005515
Blo11g00268 1387 Gene3D - 2 288 IPR015943 GO:0005515
Blo11g00268 1387 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 386 464 IPR013083 -
Blo11g00268 1387 SUPERFAMILY Nucleotide-diphospho-sugar transferases 678 1195 IPR029044 -
Blo11g00268 1387 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 819 956 IPR029044 -
Blo11g00268 1387 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00268 Blo-Chr11:2164342 Blo16g00915 Blo-Chr16:37045354 0 dispersed
Blo11g00268 Blo-Chr11:2164342 Blo05g00493 Blo-Chr5:8182909 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00268 K10999 - jre:109011298 2211.03