Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00306 ATGGCGCTATTGAGCCCCACTTTCTTGTTTCTCGCTCTGTGCTGCACGGTCATAGCATCGTTTTGGAGTTTGGCTAATTCAGCTGACAGTATCTCTGCAAACGAGTTCATCAATGGAAACCAAACGCTTGTTTCTTCTGGAGAAAAGTTTGTATTAGGGTTTTTCCCTGCTGAAGTTTCGAACTCTCAATATTTAGGAATATGGTACAAGAAGATCCTCCCTCGGACTATAGTGTGGGTGGCAAACAGAAAGAATCCAGTTGCAAATTCATCTCCCAATTTACGTTTCGACGAAGTTGGAAATCTAGTTCTTCTCAATCAAACGGGAGGCATTTTGTGGTCGACGAATTCGTCAAAACAAGTGAAAAGTCCGGTCGCGAAGCTTTTAGATTCCGGAAATTTGGTTTTAGTGGATTCTGAAAGTGGAAATTCCGAGGATTATTCGTGGCAGAGCTTCGATTATCCGTCGGATACGCTCCTACCAGGAATGAAACTAGGGTGGGACTTGAAACTCGGTTTCAATCGCGAAATAAGATCGTGGAAAAGTTCAAACGATCCTACTCCGGGCAATTTCTCTTACAGTGTAGATTTACAAGGTCTTCCTCAACTCGTTCTTCATGATGGATCAACCAAAAGTTTCAGAAGCGGTCAATGGATTGGGACCCAATTCAGTGGCTCGACAATTCTAGGTCCAAACACTCTATATGTTCCCCAATTTATTTACAATTCCAATGAAGCGTATTACTCATTTGACGCAATAGATGATAGAATTACCCGATTCGTGATGGATCCAGCTGGATTTGTTCAGCAATACGACTGGGATGATACACAAGGAAGTTGGGATTTTCTTTACACAGTTCCATCAGATCGCTGCAATAACTATGACCGTTGCGGCCATTATGGGCTCTGTTTTTTCAATGAGACTGCTTGGTGCAGCTGTTTGAGTGGATTCACACCTAGAAATCCTGGAGATTGGGCGCTTTACAAATGGTCTGAAGGGTGTGTTAGGAAGGATTTGAAGATCTGCAAGAATGGGGAAGGGTTTGTGAAGCTTAGTGAGGTCAAACTTCCAGATGCAGAATTTGGATTTGTTATGAGTAACGTTGATGATTGTGAAGCAGAGTGTTTGAAGAATTGTTCTTGCAATGCTTATGCCAAGCTAGATAGTACAGGCACTAACAATAGCTGCTTTTTCTGGTCTGGTGATTTGGTTGATACTAGAATCTCTGGCTCTGGGCAAGATCTCTATATTAGAGCAGCAGCTTCAGAATTGGAATCTGAGGCAGATGATAAGCGCAACGTCGCTGTTCTTGTAGCCGTGATTGTATCTGTTATTTCGGCCGTCATGTTCGTGTCTTTGATCAGCTGGTTTTTGATTAAGAAGAGGAGAAATGCTCTAAGAAATCAGGCTCCCCAAGATGATCTCGAGACTCCTCTATTTCACATTGAAGTCATTGAAGCTGCTACGCAGAATTTCTCTCTTTCAAACAAGATTGGAGAAGGTGGATTTGGACCTGTATACAAGGGTAAGCTTCTATCAGGACAAGAGGTTGCAGTAAAACGGCTATCAGAGAGATCTGGGCAAGGAGTTCATGAGTTTAAAAATGAGGTTCTTTTGATCTCCCAACTTCAACATAGGAATCTTGTTCAGCTTCTGGGTTGCTGCATTCATAGAGAAGAGAGAATGTTAATCTATGAATACATGCCAAACAAAAGTCTAGACTACTTCATCTTTGATGATGAGAAAAGATGTTCACTCGATTGGAAAAAACGAAAAAATATTATTGACGGGATTGCTCGAGGGCTTCTCTATCTTCATAGAGATTCAAGATTGAGGATAATTCATAGAGATCTCAAAGCAAGTAACACCTTGTTAGATGAAGATATGAATCCAAAAATTTCAGATTTTGGCATGGCCAGAATGTTTGCTGGAGATCAAACTGCAACAAAAACAAAGAGAGTCGTGGGAACATATGGCTACATGTCCCCAGAATATGCAATCGACGGATATTTTTCTTTCAAATCGGACGTTTTCAGCTTCGGAGTTATACTGGTGGAGATAGTGAGTGGACGGAAGAACAGAGGGTTCTTCCATCCAAATCACCAACTAAATCTTATTGGACATGCATGGAAGCTTTGGAAAGAAGGAAGAGCCCTGGAATTGATGGACGAAGTTTTTGAGAATCAATTTCCACCTTCTGAAGCATTGAAGTTCATTCAAGTCGGTCTTCTTTGCGTTCAACAGCGACAGGAGGAAAGACCGATGATGTCGACCGTAGTATTGATGTTGGACAGTGATAATATGGAGTTGCCGGAGCCTGGCCGACCTGGATTTTATGCAGAGAGGAGCATCTCTGTCACTGATTCACAGCTAGGAAAATTAGCTCCCACTTCAAATGAGATCAGTCTGACTTTGCTTGAAGGCCGTTAA 2430 42.02 MALLSPTFLFLALCCTVIASFWSLANSADSISANEFINGNQTLVSSGEKFVLGFFPAEVSNSQYLGIWYKKILPRTIVWVANRKNPVANSSPNLRFDEVGNLVLLNQTGGILWSTNSSKQVKSPVAKLLDSGNLVLVDSESGNSEDYSWQSFDYPSDTLLPGMKLGWDLKLGFNREIRSWKSSNDPTPGNFSYSVDLQGLPQLVLHDGSTKSFRSGQWIGTQFSGSTILGPNTLYVPQFIYNSNEAYYSFDAIDDRITRFVMDPAGFVQQYDWDDTQGSWDFLYTVPSDRCNNYDRCGHYGLCFFNETAWCSCLSGFTPRNPGDWALYKWSEGCVRKDLKICKNGEGFVKLSEVKLPDAEFGFVMSNVDDCEAECLKNCSCNAYAKLDSTGTNNSCFFWSGDLVDTRISGSGQDLYIRAAASELESEADDKRNVAVLVAVIVSVISAVMFVSLISWFLIKKRRNALRNQAPQDDLETPLFHIEVIEAATQNFSLSNKIGEGGFGPVYKGKLLSGQEVAVKRLSERSGQGVHEFKNEVLLISQLQHRNLVQLLGCCIHREERMLIYEYMPNKSLDYFIFDDEKRCSLDWKKRKNIIDGIARGLLYLHRDSRLRIIHRDLKASNTLLDEDMNPKISDFGMARMFAGDQTATKTKRVVGTYGYMSPEYAIDGYFSFKSDVFSFGVILVEIVSGRKNRGFFHPNHQLNLIGHAWKLWKEGRALELMDEVFENQFPPSEALKFIQVGLLCVQQRQEERPMMSTVVLMLDSDNMELPEPGRPGFYAERSISVTDSQLGKLAPTSNEISLTLLEGR 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2472267 2477477 + BLOR03182 Blo11g00306 66506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00306 809 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544
Blo11g00306 809 Gene3D Transferase(Phosphotransferase) domain 1 568 771 - -
Blo11g00306 809 SMART serkin_6 492 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00306 809 Gene3D Phosphorylase Kinase; domain 1 456 567 - -
Blo11g00306 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Blo11g00306 809 Pfam D-mannose binding lectin 76 181 IPR001480 -
Blo11g00306 809 Pfam PAN-like domain 342 406 IPR003609 -
Blo11g00306 809 ProSiteProfiles PAN/Apple domain profile. 342 420 IPR003609 -
Blo11g00306 809 Gene3D Hepatocyte Growth Factor 340 416 - -
Blo11g00306 809 SMART ntp_6 343 419 IPR003609 -
Blo11g00306 809 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Blo11g00306 809 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 807 - -
Blo11g00306 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Blo11g00306 809 SMART blect_4 34 155 IPR001480 -
Blo11g00306 809 CDD STKc_IRAK 498 764 - -
Blo11g00306 809 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Blo11g00306 809 CDD PAN_AP_plant 343 418 - -
Blo11g00306 809 Pfam Protein tyrosine and serine/threonine kinase 493 761 IPR001245 GO:0004672|GO:0006468
Blo11g00306 809 Gene3D - 23 152 IPR036426 -
Blo11g00306 809 SUPERFAMILY Protein kinase-like (PK-like) 476 780 IPR011009 -
Blo11g00306 809 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 807 - -
Blo11g00306 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 186 IPR036426 -
Blo11g00306 809 ProSiteProfiles Protein kinase domain profile. 492 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00306 809 CDD B_lectin 34 155 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00613 Blo-Chr3:24873821 Blo11g00306 Blo-Chr11:2472267 2.12E-167 dispersed
Blo03g00614 Blo-Chr3:24889035 Blo11g00306 Blo-Chr11:2472267 2.82E-179 dispersed
Blo11g00306 Blo-Chr11:2472267 Blo14g00348 Blo-Chr14:3779111 0 dispersed
Blo14g00339 Blo-Chr14:3553932 Blo11g00306 Blo-Chr11:2472267 2.77E-120 dispersed
Blo11g00306 Blo-Chr11:2472267 Blo08g00161 Blo-Chr8:1664977 2.64E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84531 PF07714 PK_Tyr_Ser-Thr 1.50E-48 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00306 - - qsu:112035700 1011.91