Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00311 ATGGCTGCCACTACAACTGCTGCCGCCACCTCCTCCTTCATCGGGACCCGCCTCCCGGAGATCCGTTCAAACGCAGGCAGAGTGCAGGCCCGTTTCGGATTCGGGAAGAAAGGCCCGGCCAAGAAAGTGAAGAAGCCTATTTTTGACCGTCCTCTGTGGTATCCTGGAGCTAAAGCGCCGGAATGGCTTGATGGGAGTTTGGTCGGAGATTACGGGTTCGACCCGTTTAATCTGGGAAAACCCGCCGAGTACTTGCAGTTCGATTTGGACTCTCTGGATCAAAACCTTGCAAAGAACGCGGCCGGAGATATAATCGGAACCAGGTTTGAGAGCGCCGATGTGAAGTCTACTCCTTTCCAACCTTACTCCGAGGTTTTTGGGTTGCAGAGGTTCCGCGAGTGTGAACTTATTCATGGAAGATGGGCTATGTTGGCTACGCTCGGTGCCATTACTGTTGAGTGGCTCACCGGAGTCACCTGGCAAGACGCCGGAAAGGTAGAGCTAGTGGACGGGGCATCATATCTGGGCCAACCCCTTCCGTTCTCCATTTCGACATTGATATGGATCGAAGTTTTAGTCATTGGATACATCGAGTTTCAGAGAAACGCAGAGCTCGACCCTGAGAAGAGGCTCTACCCCGGAGGAAAATTCTTCGACCCATTAGGCTTGGCGGCCGATCCAGAGAAGAAGGAGAGGCTGCAGCTGGCGGAAATCAAGCACGCTCGGCTAGCCATGATCGGCTTCCTCGGGTTTGCCGTTCAAGCAGCGGCCACCGGCAAAGGGCGGAAGCTTACAATTAGGTCATCTGAGACGGATGCAGATGAAGCTGTCTTCAAATCTAAAGCTCCAGAAAAAGCGCCTGTTAGCAGTGGTTCTAGCTTCAATCAGCTTCTTGGCATTAAAGGAGCAGCTCAAGAAAGTAATAAATGGAAAATTCGTCTTCAATTGACAAAACCAGTTACTTGGCCTCCATTAGTCTGGGGAGTAGTCTGCGGAGCTGCAGCTTCTGGAAACTTTCATTGGAATTTGGAGGATGTAGCCAAGTCAATTGTTTGCATGATGATGTCTGGTCCATTTCTAACTGGCTACACACAGACAATAAATGACTGGTATGACCGAGAAATTGATGCGATCAATGAACCTTATCGACCAATTCCTTCAGGCGCAATTTCTGAGAGTGAGGTGATTACTCAAATATGGGTGCTGCTACTGGGAGGACTTGGTTCTGCTGCTTTATTAGACGCTTGGGCAGGGCATGACACCCCAATAATTTTTTACCTTGCTCTTGGTGGATCTTTATTATCATACATATATTCTGCCCCGCCTTTAAAGCTTAAACAAAATGGATGGATTGGAAATTTTGCCCTGGGAGCAAGTTATATTAGTTTGCCATGGTGGGCAGGCCAAGCTTTATTTGGAACTCTGACGCCTGACATAATTGTTCTCACACTCTTGTACAGCATAGCTGGTCTGGGCATTGCCATTGTGAACGACTTCAAAAGCGTTGAAGGTGACAGAGCTCTTGGACTTCAGTCAATTCCAGTGGCTTTTGGTGCTGAAACTGCTAAATGGATCTGTGTTGGTGCTATTGACATAACTCAGTTATCAGTGGCTGGTTATTTGCTTGGGGCTGGTAAGCCCTACTATGCTCTTGCCCTTCTTGCTTTGATAATTCCTCAAGTAGTCTTCCAGTTCCAATACTTCCTAAAAGACCCTGTGAAGTATGATGTTAAATATCAGACCAGCCATTTTTCCACTCAGGAAGCAGGAAACAACAAATCCAGGCAAACTGGCAATGTATACAAAAATGTAAAGAAGAAAATTGAAAGGGGCGTGGCCTTTCCAACTTGCATTTCTGTCAACAACACTGTTTGTCACTATTCACCCCAAGCTGGTGATGAGGCTGCATTAGAAAGTGGTGACATAGTCAAGATAGACATGGGTTGTCACATTGATGGGTTCATTGCTGTTGTTGGTCATACCCATGTTCTTCAGGAGGGTTCAATTACGGGAAGAGCAGCTGATGTTATTGCCGCTGCTAACACTGCTGCTGAAGTTGCCCTGAGGCTTGTAAAGCCCGGAAAGAAGAACAAGGATGTAACTGATGCCATTCAGAAGGTTGCCGTGGCTTATGACTGCAAAATTGTTGAAGGTGTTCTTAGCCACCAGCTGAAGCAATTTGTGATTGACGGCAACAAAGTCATAGTCAGTGTCTCCAACCCAGAAACAAAAGTAGATGAGGCAGAGTTTGAGGAGAATGAAGTTTATGCAATAGATATAGTAACCAGCACTGGTGAAGGAAAGCCTAGATTGTTGGATGAAAAGCAGACAACAATCTACAAAAGAGCAGTGGACAAAAATTATCACTTGAAAATGAAAGCTTCAAGATTTATTTTCAGTGAAATAAATCAGAAATTTCCTATCATGCCGTTTACTGCCAGGTCTTTGGAGGAGAAAAGGGCACGATTAGGATTAGTTGAATGTGTTAACCATGATCTTTTGCAGCCATATCCTGTCCTTCACGAGAAACCTGGTGACCATGTTGCTCATATTAAATTCACAGTCTTGTTAATGCCTAATGGGTCAGATCGGATAACATCTCATCCACTGCAAGACTTACAGCCCACTAAAACTGTAGATGACCCTGAAATCAAAGCCTGGTTGGCACTTGGAACAAAAACAAAGAAAAAAGGCGGTGGAAAGAAGAAAAAAGGCAAGAAAGGTGAGAAAGCTGAGGAATCCACAGATGATGTTGTTCCCATGGATACAGCAAATGAAACGTCAAAAGAGTAA 2793 45.79 MAATTTAAATSSFIGTRLPEIRSNAGRVQARFGFGKKGPAKKVKKPIFDRPLWYPGAKAPEWLDGSLVGDYGFDPFNLGKPAEYLQFDLDSLDQNLAKNAAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGASYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKERLQLAEIKHARLAMIGFLGFAVQAAATGKGRKLTIRSSETDADEAVFKSKAPEKAPVSSGSSFNQLLGIKGAAQESNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNLEDVAKSIVCMMMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISESEVITQIWVLLLGGLGSAALLDAWAGHDTPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSIPVAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIIPQVVFQFQYFLKDPVKYDVKYQTSHFSTQEAGNNKSRQTGNVYKNVKKKIERGVAFPTCISVNNTVCHYSPQAGDEAALESGDIVKIDMGCHIDGFIAVVGHTHVLQEGSITGRAADVIAAANTAAEVALRLVKPGKKNKDVTDAIQKVAVAYDCKIVEGVLSHQLKQFVIDGNKVIVSVSNPETKVDEAEFEENEVYAIDIVTSTGEGKPRLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARSLEEKRARLGLVECVNHDLLQPYPVLHEKPGDHVAHIKFTVLLMPNGSDRITSHPLQDLQPTKTVDDPEIKAWLALGTKTKKKGGGKKKKGKKGEKAEESTDDVVPMDTANETSKE 930
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2502326 2517310 + BLOR03187 Blo11g00311 66511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00311 930 Gene3D Chlorophyll a/b binding protein domain 53 276 - -
Blo11g00311 930 Gene3D UbiA prenyltransferase 319 479 IPR044878 -
Blo11g00311 930 PRINTS Methionine aminopeptidase-1 signature 616 629 IPR001714 -
Blo11g00311 930 PRINTS Methionine aminopeptidase-1 signature 641 657 IPR001714 -
Blo11g00311 930 TIGRFAM ChlG: chlorophyll synthase ChlG 296 582 IPR011799 GO:0015995|GO:0016021|GO:0046408
Blo11g00311 930 SUPERFAMILY Chlorophyll a-b binding protein 46 262 - -
Blo11g00311 930 PANTHER ERBB-3 BINDING PROTEIN 1 595 926 - -
Blo11g00311 930 CDD PA2G4-like 596 866 - -
Blo11g00311 930 CDD PT_UbiA_chlorophyll 313 580 IPR006372 -
Blo11g00311 930 SUPERFAMILY Winged helix DNA-binding domain 772 843 IPR036390 -
Blo11g00311 930 Gene3D Creatinase/methionine aminopeptidase superfamily 595 871 IPR036005 -
Blo11g00311 930 MobiDBLite consensus disorder prediction 890 930 - -
Blo11g00311 930 Pfam Metallopeptidase family M24 604 760 IPR000994 -
Blo11g00311 930 TIGRFAM chlor_syn_BchG: bacteriochlorophyll/chlorophyll synthetase 311 582 IPR006372 -
Blo11g00311 930 Pfam Chlorophyll A-B binding protein 59 255 IPR022796 -
Blo11g00311 930 Gene3D - 778 838 IPR036388 -
Blo11g00311 930 MobiDBLite consensus disorder prediction 905 930 - -
Blo11g00311 930 SUPERFAMILY Creatinase/aminopeptidase 604 869 IPR036005 -
Blo11g00311 930 TIGRFAM crvDNA_42K: DNA-binding protein, 42 kDa 595 913 IPR004545 -
Blo11g00311 930 Pfam UbiA prenyltransferase family 323 571 IPR000537 GO:0016021|GO:0016765
Blo11g00311 930 PANTHER PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P 595 926 - -
Blo11g00311 930 Gene3D UbiA prenyltransferase 480 585 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01052 Blo-Chr1:35095930 Blo11g00311 Blo-Chr11:2502326 0 dispersed
Blo07g01143 Blo-Chr7:31283238 Blo11g00311 Blo-Chr11:2502326 1.91E-155 dispersed
Blo11g00311 Blo-Chr11:2502326 Blo13g00725 Blo-Chr13:30084886 1.20E-33 dispersed
Blo11g00311 Blo-Chr11:2502326 Blo04g00315 Blo-Chr4:2472779 1.50E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00311 - K04040 jre:108994946 562.377