Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00315 AAATTTACACCAACGCCGATCATGGCTACAACGGACGCCTCCCCGAAATATCCGAGTGTGCCGAAGTCACCCGATTTCCTGCCCGGAATATCTGTTTCTCCTCCGACGCACGACGGCCTTTTCTTCTCTCAGTTAATGATTTGCGGGTCCATAGCCGGATCGGTGGAGCATATGGCGATGTTTCCTGTCGATACTCTCAAGACTCGGATGCAAGCTCTAGGTGGATCTTGCTCCCCACAACCCGTCGGACTCCGGCTAGCCCTCGGCTCTATCTTGAAGCTGGAGGGTCCCTCCGGTCTCTATCGCGGGATTGGAGCAATGGGTCTCGGTGCCGGACCCGCCCACGCCGTTTATTTCTCTGTTTACGAAGTTTGCAAAGAAGTTCTTTCCCGTGGAAATCCTAACAACTCGACTGTCCATGCTGTTTCCGGCGTTTTTGCTACTGTCGCGAGTGACGCAGTGATTACGCCCTTGGATATGGTGAAGCAGAGGCTGCAGTTGAAAAGCAGCCCTTACAGCGGAGTCGGAGACTGTGTGAGAAGAGTACTATTGGAAGAAGGTGTTGGAGCTTTTTACGCTTCGTATCGAACTACTGTTTTGATGAACGCGCCGTTCACAGCAGTCCATTTTGCTGCATACGAAGCTGCAAAGAGAGCTCTAATGGAGGTTTCTCCAGATAGCGCTAACGACGAGAGGCTGGTGGTTCATGCGACAGCGGGCGCAGTCGCAGGGGCCTTAGCCGCTGCTTTGACTACTCCTCTTGACGTTGTTAAAACTCAGTTGCAGTGCCAGGGAGTGTGTGGGTGTGACAGATTTTCAAGCAGCTCCATTGGAGATGTAGTAAGAAGGGTGATTGGGAAGGAGGGATATCACGGGCTATTGAGAGGGTGGATTCCTAGGATGCTTTTTCATGCGCCAGCTGCTGCAATTTGCTGGTCTACTTACGAAGCTTCAAAAACCTTCCTTCAAAAACTCAATCACAGCACT 987 51.77 KFTPTPIMATTDASPKYPSVPKSPDFLPGISVSPPTHDGLFFSQLMICGSIAGSVEHMAMFPVDTLKTRMQALGGSCSPQPVGLRLALGSILKLEGPSGLYRGIGAMGLGAGPAHAVYFSVYEVCKEVLSRGNPNNSTVHAVSGVFATVASDAVITPLDMVKQRLQLKSSPYSGVGDCVRRVLLEEGVGAFYASYRTTVLMNAPFTAVHFAAYEAAKRALMEVSPDSANDERLVVHATAGAVAGALAAALTTPLDVVKTQLQCQGVCGCDRFSSSSIGDVVRRVIGKEGYHGLLRGWIPRMLFHAPAAAICWSTYEASKTFLQKLNHST 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2550858 2551948 + BLOR03191 Blo11g00315 66515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00315 329 PRINTS Mitochondrial carrier protein signature 150 168 IPR002067 GO:0055085
Blo11g00315 329 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Blo11g00315 329 PRINTS Mitochondrial carrier protein signature 58 72 IPR002067 GO:0055085
Blo11g00315 329 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Blo11g00315 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 40 128 IPR018108 -
Blo11g00315 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 321 IPR018108 -
Blo11g00315 329 Gene3D Mitochondrial carrier domain 136 329 IPR023395 -
Blo11g00315 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 135 219 IPR018108 -
Blo11g00315 329 PANTHER MITOFERRIN-1-RELATED 9 328 - -
Blo11g00315 329 Pfam Mitochondrial carrier protein 137 222 IPR018108 -
Blo11g00315 329 Pfam Mitochondrial carrier protein 232 324 IPR018108 -
Blo11g00315 329 Pfam Mitochondrial carrier protein 42 131 IPR018108 -
Blo11g00315 329 PANTHER MITOFERRIN-LIKE 9 328 - -
Blo11g00315 329 SUPERFAMILY Mitochondrial carrier 42 316 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01202 Blo-Chr3:38308074 Blo11g00315 Blo-Chr11:2550858 4.40E-13 dispersed
Blo11g00315 Blo-Chr11:2550858 Blo16g00502 Blo-Chr16:19958592 1.08E-17 dispersed
Blo11g00315 Blo-Chr11:2550858 Blo13g01027 Blo-Chr13:32612166 3.23E-159 transposed
Blo11g00315 Blo-Chr11:2550858 Blo14g00065 Blo-Chr14:491162 2.68E-159 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00315 K15113 - jre:108982304 517.309