Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00324 | ATGGGTAGGGGAAGAGTGGAGCTGAAGAGGATAGAGAACAAAATAAACAGGCAGGTTACTTTCGCAAAGAGGAGAAATGGGGTTTTGAAGAAAGCTTATGAGCTTTCTGTTCTTTGTGATGCTGAGGTTGCTCTCATCGTCTTCTCCAGCCGTGGAAAACTCTATGAGTTCTGCAGCACCTCTAACATGCTCAAAACGCTGGAAAGGTACCAAAAATGTAGCTATGGGGCAGTGGAAGTCAGCAGACCCAACAAGGAGCTTGAGAGTAGCTACCGAGAATACTCGAAACTCAAAGCTAAGCTCGAGTCTCTGCAAAGAACTCAAAGAAACATTATTGGAGAGGATTTAGGTTCACTGAATTCAAATGAGCTTGAGCGGCTTGAATGTCAACTGGAGGCATCCCTCAAGCAAGTTAGGTCAACAAGGACACAGACTATGCTTGACCAGCTTTCAGATCTTCAAAACAAGGTACAATATTTGCTTCAACTAAGAATCAATGGTGAGCAGCTGCTGGGTGAAGCAAATAGATGTCTGAATATAAAGCTGGATGAGATTAGTTCTAGAAACCATCTGCGGCAGCCATGGGAGGGTGGTGGGCAATGCATTTCATATGCTCCTCAAAATGCTGAGTCTCAGGCCTTCTTCCAGCCTCTAGACTGCAATCCCACTTTGCAAATTGGCTATACAGCTTCAGTTTCAGACCAGATCACTGCTACCACCATGGCTACAACCTCTCATTCCCATCCAGTCAATGCATTCATTCCAGGTTGGATGCTTTGA | 780 | 45.0 | MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIVFSSRGKLYEFCSTSNMLKTLERYQKCSYGAVEVSRPNKELESSYREYSKLKAKLESLQRTQRNIIGEDLGSLNSNELERLECQLEASLKQVRSTRTQTMLDQLSDLQNKVQYLLQLRINGEQLLGEANRCLNIKLDEISSRNHLRQPWEGGGQCISYAPQNAESQAFFQPLDCNPTLQIGYTASVSDQITATTMATTSHSHPVNAFIPGWML | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2653451 | 2656769 | + | BLOR03200 | Blo11g00324 | 66524 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00324 | 259 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00324 | 259 | PANTHER | DEVELOPMENTAL PROTEIN SEPALLATA 1 | 1 | 242 | - | - | |
Blo11g00324 | 259 | SUPERFAMILY | SRF-like | 2 | 80 | IPR036879 | GO:0003677|GO:0046983 | |
Blo11g00324 | 259 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 1 | 242 | - | - | |
Blo11g00324 | 259 | Coils | Coil | 84 | 114 | - | - | |
Blo11g00324 | 259 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00324 | 259 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00324 | 259 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00324 | 259 | CDD | MADS_MEF2_like | 2 | 76 | IPR033896 | GO:0000977|GO:0045944 | |
Blo11g00324 | 259 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00324 | 259 | ProSiteProfiles | K-box domain profile. | 87 | 188 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Blo11g00324 | 259 | Gene3D | - | 13 | 84 | IPR036879 | GO:0003677|GO:0046983 | |
Blo11g00324 | 259 | Coils | Coil | 124 | 144 | - | - | |
Blo11g00324 | 259 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00324 | 259 | Pfam | K-box region | 85 | 179 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Blo11g00324 | 259 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo11g00324 | Blo17g00396 | CCT | |
Blo11g00324 | Blo17g00396 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo11g00324 | Blo-Chr11:2653451 | Blo11g00805 | Blo-Chr11:12765549 | 1.53E-50 | dispersed | |
Blo16g01080 | Blo-Chr16:39355703 | Blo11g00324 | Blo-Chr11:2653451 | 7.37E-16 | dispersed | |
Blo11g00324 | Blo-Chr11:2653451 | Blo17g00396 | Blo-Chr17:4438325 | 3.99E-121 | wgd | |
Blo11g00324 | Blo-Chr11:2653451 | Blo18g00414 | Blo-Chr18:4509735 | 6.15E-135 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12898 | PF01486 | K-box | 3.90E-22 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00324 | K09264 | - | qsu:112023853 | 379.407 |