Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00325 ATGGATGGAGGCGAGAAATGCCAGGAACAGGTGGGAACGGGAATGGGAAAGGTGAGGATGATGATGGCGGAGAAGGAGTTTCATTTGGAATTTGAGGAAAAGGGAAGGACAGTGATGGCGGGAATCGAAAAGGATTTTTCTACTGATACTAATGCACCTGCAGAGATTTACATAGAGAGAGCTTATGTAAAAAAATCCCATAATACGCAGAAGGTGAATCTCCTCGAAAAGGAGTCTTGCTTGTTTATAAAGGACGAAACTTGGCTCGCAGAGTATACATCACTTTTCAGAAGAGGAGAAGTGCATTCCTTTTCTCCATCTATTCAGGGGGCAACATCTTTGACTTCCACTGCATCTTTTGACAACTCCTTCCCTGATATGTATCATTCTCCTCCATGGCCATTGCCTTATGATGCTGACCCAAGATATATCCACCTGCAACGTGATGGACTAGTTTTGAGGTGTGAAAAGGGCTCGAGCCATTTGCACGGAGAATTGGAGCCTCTGAGAAGTGATATTGATATGGATATGGCCTTGAGGACAGCTGACAAGTTGAATAGATCTACTGATGAAGATGAATCTAAAGATGACACGATGAAGTCCTCGTTAAATTTTTCTTCCTCGAAAAAATCCACTGTAGTTGAGCAAAATTACGCATTTTCGGAAGACGAGGACGTCTGTCCTACGTGTCTTGAAGAATATACTCCTGAAAATCCCAAGATTATGACTAAATGCTCTCATGATTTTCATCTTGGATGCATATATGAATGGATGGAGAGAAGTGAGAGCTGCCCAGTTTGTGGGAAGGTATCATTCTTTATCCAGCCTCTTTACTAG 837 42.53 MDGGEKCQEQVGTGMGKVRMMMAEKEFHLEFEEKGRTVMAGIEKDFSTDTNAPAEIYIERAYVKKSHNTQKVNLLEKESCLFIKDETWLAEYTSLFRRGEVHSFSPSIQGATSLTSTASFDNSFPDMYHSPPWPLPYDADPRYIHLQRDGLVLRCEKGSSHLHGELEPLRSDIDMDMALRTADKLNRSTDEDESKDDTMKSSLNFSSSKKSTVVEQNYAFSEDEDVCPTCLEEYTPENPKIMTKCSHDFHLGCIYEWMERSESCPVCGKVSFFIQPLY 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2658313 2665744 - BLOR03201 Blo11g00325 66525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00325 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 203 271 IPR013083 -
Blo11g00325 278 Pfam RING-H2 zinc finger domain 224 267 IPR024766 GO:0008270
Blo11g00325 278 MobiDBLite consensus disorder prediction 185 206 - -
Blo11g00325 278 SUPERFAMILY RING/U-box 219 274 - -
Blo11g00325 278 SMART ring_2 227 267 IPR001841 -
Blo11g00325 278 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 77 273 - -
Blo11g00325 278 MobiDBLite consensus disorder prediction 185 199 - -
Blo11g00325 278 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 77 273 - -
Blo11g00325 278 ProSiteProfiles Zinc finger RING-type profile. 227 267 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00325 Blo-Chr11:2658313 Blo12g00545 Blo-Chr12:23416809 5.95E-12 dispersed
Blo10g00170 Blo-Chr10:2033065 Blo11g00325 Blo-Chr11:2658313 1.19E-38 wgd
Blo11g00325 Blo-Chr11:2658313 Blo18g00416 Blo-Chr18:4519272 3.40E-77 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00325 - - mnt:21401143 259.225