Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00335 ATGTGTTTAGGTAAACGTACGTTGGAGGGAGGCAAGGTGACTCCACCATGGAACTCTGTCAAAGTTAAAGCTGGCTTCCCTCAAAGGACCACCATTGCTGCTGACAGGGGAACTCCTAGCCAGAATTTAGCTGGAACTCTCTCTCCAAGCATAGGAAACCTAACAAATCTTCAGATAGTGCTTTTACAGAACAACAATATAACAGGTCCAATTCCTTCTGAGATTGGGAGGCTTTCAATGCTTCATACACTCGATCTTTCGAATAACTTCTTCAATGGAGAAATTCCTTCTTCTCTGAGTAATCTTAGAAATCTACAGTACTTGAGGCTAAATAATAATAGTCTTTCTGGGCAATTTCCTATGAACTTGGGAAATATGACTCACCTAGATTTTCTTGATTTATCCTACAATAATCTCACTGGCCCTGTCCCCAGATTTCCAAACAAAACAGTCAAATCGAAAAAACACAAAACGGCCCTTGCAATCGCCTCCACTCTCACCTGCCTCTGTTTGATTTCTCTTGGAATTGGACTGTTTCTATGGTGGAAACATAAATACAACAAACAAATTTTCTTTGATGTAAAGGATCGAAATCACGAGGAGGTCCATCTTGGAAACGTGAAGAGGTTTCAATTCAGGGAGCTTCAAATAGCCACTCGAAATTTCAGCAGCAAAAACATACTCGGAAAAGGAGGATTTGGAAATGTGTACAAAGGAATTCTCAGTGATGGAGGTATAGTAGCTGTGAAGAGGCTCAATGATGGCAATGCCATTGGAGGTGAAGTACAGTTTCAGACTGAAGTTGAGATGATCAGCCTAGCTGTTCATAGAAATCTCTTGAGACTATACGGGTTTTGTATAACGCCCACTGAAAGACTCCTCGTCTATCCGTACATGCCAAACGGAAGCGTAGCCTCTCGTCTTAAAGGAAAGCCGATATTGGAATGGGTGACGAGGAAGAAGATCGCGATAGGGGCAGCAAGGGGATTGTTGTATTTACATGAGCAATGTGATCCGAAAATAATACACAGGGACGTAAAAGCCGCTAATATTTTGCTAGACGAGTATTGTGAAGCTGTCGTCGGAGATTTTGGGTTGGCAAAGCTTTTGGATCATCAGGATTCGCACGTCACAACGGCCGTGAGAGGAACTGTGGGCCACATGGCCCCGGAATATCTTTCGACGGGCCAGTCGTCTGAAAAGACGGATGTTTTTGGCTTTGGAATTCTCCTGCTTGAGCTCATTACAGGTCAAAGAGCACTTGAATTTGGGAAATCAGCTAATCAGAAAGGAGCAATTCTTGATTGGGTGAGGAAAATACAGCATGAAAAGAAACTAGAGGTGCTTGTGGACAAGGATTTGAAGGGCAATTACGATCGGATCGAGCTGGAGGAGATGGTTCAGGTGGCTCTCCTCTGCACCCAATATCTTCCTGTCCACAGGCCTAAAATGTCTGAAGTTGTGAGAATGCTTGAAGGGGATGGCCTTGCTGTGAGGTGGGAGGCTTCTCAAAAAGTGGACCCAACAAAGGGCAAGCCTCATGAATTCTCCTCCTCCGATCGATTTTCCGATCTCACCGACGACTCTTCCCTACTAGTTCAAGCAATGGAGCTCTCCGGCCCCCGGTGA 1629 44.57 MCLGKRTLEGGKVTPPWNSVKVKAGFPQRTTIAADRGTPSQNLAGTLSPSIGNLTNLQIVLLQNNNITGPIPSEIGRLSMLHTLDLSNNFFNGEIPSSLSNLRNLQYLRLNNNSLSGQFPMNLGNMTHLDFLDLSYNNLTGPVPRFPNKTVKSKKHKTALAIASTLTCLCLISLGIGLFLWWKHKYNKQIFFDVKDRNHEEVHLGNVKRFQFRELQIATRNFSSKNILGKGGFGNVYKGILSDGGIVAVKRLNDGNAIGGEVQFQTEVEMISLAVHRNLLRLYGFCITPTERLLVYPYMPNGSVASRLKGKPILEWVTRKKIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHMAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANQKGAILDWVRKIQHEKKLEVLVDKDLKGNYDRIELEEMVQVALLCTQYLPVHRPKMSEVVRMLEGDGLAVRWEASQKVDPTKGKPHEFSSSDRFSDLTDDSSLLVQAMELSGPR 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2786393 2792794 - BLOR03211 Blo11g00335 66535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00335 542 Pfam Leucine Rich Repeat 81 102 IPR001611 GO:0005515
Blo11g00335 542 Gene3D Transferase(Phosphotransferase) domain 1 299 510 - -
Blo11g00335 542 MobiDBLite consensus disorder prediction 505 522 - -
Blo11g00335 542 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 152 542 - -
Blo11g00335 542 ProSiteProfiles Protein kinase domain profile. 222 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00335 542 SUPERFAMILY Protein kinase-like (PK-like) 200 492 IPR011009 -
Blo11g00335 542 Gene3D Phosphorylase Kinase; domain 1 191 298 - -
Blo11g00335 542 Pfam Protein kinase domain 223 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00335 542 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 35 151 - -
Blo11g00335 542 ProSitePatterns Protein kinases ATP-binding region signature. 228 250 IPR017441 GO:0005524
Blo11g00335 542 Gene3D Ribonuclease Inhibitor 16 165 IPR032675 -
Blo11g00335 542 SUPERFAMILY L domain-like 41 150 - -
Blo11g00335 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672|GO:0006468
Blo11g00335 542 MobiDBLite consensus disorder prediction 504 524 - -
Blo11g00335 542 SMART serkin_6 222 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00335 542 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 35 151 - -
Blo11g00335 542 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 152 542 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00467 Blo-Chr1:5178225 Blo11g00335 Blo-Chr11:2786393 0 dispersed
Blo08g00504 Blo-Chr8:13466713 Blo11g00335 Blo-Chr11:2786393 0 dispersed
Blo11g00335 Blo-Chr11:2786393 Blo14g00613 Blo-Chr14:10953028 0 dispersed
Blo11g00335 Blo-Chr11:2786393 Blo01g00391 Blo-Chr1:4427087 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84533 PF00069 Pkinase 1.20E-44 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00335 - - jre:109001347 821.231