Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00365 ATGTGCTTAGTACAAACTCCAGAGCTTTCTTCAGAAATCTCTTACGAAATTGCACAAGAAATGGGAAAAAATGGAGGGTTTGCGAAGAATACTGGTTTTTTGTTCTGCAGCTCAAACTATCAACCTGATGTTTCTCACTCTGTAATCAACTTCAAGAACCAGATTGATCAGAATCTAATCCATTTAAGCACTGAGTCATCTTTACTGAGTTTTGGTCAAACCCAACTAGTTGCTAAAGATGACTATTTCAACTGGCCAGCAGAGGGAGACAGCTTTGCCAATGGCTGTCAATGGAGTCAGATGATCAGTTCTCCTAGCTTACGCCTTTTGGAAGATTTGAACTGCTTCCAAAAAGCTTCTAACTTTACTCCCATGGATAATCCTTCAAAAGAGAAGCAAAGTAGATCAGATGGGTCTGGTCACTATTGGCTATATTCTGAAGAATCGGATGTTATTGTTGAAGAAGAATCAAGAACAGCTCATGAACAAAACCCCCATAAACGCCCCCATTTGATGGATAGCGAGCAATCAATGAAGAAACAGTGCAATAATTCACCTAAGAAGACAACGCCAAAGACAAGTCCAGCCAAGGATCCACAAAGTATAGCAGCAAAGAATCGACGAGAGCGAATTAGTGATCGATTGAAGACTCTTCAAGAACTAGTACCCAATGGCTCCAAGGTTGATTTGGTTACCATGCTGGAGAAAGCAATTAACTACGTCAAATTCCTGCAACTTCAAGTCAAGATTTTGGCTACGGATGAATTTTGGCCAGTTCAAGGACGGAAAGCTCCTGATATTTCTCAAGTGAGGGAAGCCATTGATGCAATTCTCTCTTCTCAGAGAGACAGAAGCTCAAGCTCAAACAGTGCAATGCTTAGCAATGGAGGTTAA 894 41.05 MCLVQTPELSSEISYEIAQEMGKNGGFAKNTGFLFCSSNYQPDVSHSVINFKNQIDQNLIHLSTESSLLSFGQTQLVAKDDYFNWPAEGDSFANGCQWSQMISSPSLRLLEDLNCFQKASNFTPMDNPSKEKQSRSDGSGHYWLYSEESDVIVEEESRTAHEQNPHKRPHLMDSEQSMKKQCNNSPKKTTPKTSPAKDPQSIAAKNRRERISDRLKTLQELVPNGSKVDLVTMLEKAINYVKFLQLQVKILATDEFWPVQGRKAPDISQVREAIDAILSSQRDRSSSSNSAMLSNGG 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3088018 3089438 + BLOR03241 Blo11g00365 66565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00365 297 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 254 IPR036638 GO:0046983
Blo11g00365 297 MobiDBLite consensus disorder prediction 154 208 - -
Blo11g00365 297 MobiDBLite consensus disorder prediction 154 175 - -
Blo11g00365 297 Gene3D - 190 252 IPR036638 GO:0046983
Blo11g00365 297 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 38 281 - -
Blo11g00365 297 SMART finulus 201 250 IPR011598 GO:0046983
Blo11g00365 297 MobiDBLite consensus disorder prediction 120 141 - -
Blo11g00365 297 Pfam Helix-loop-helix DNA-binding domain 202 245 IPR011598 GO:0046983
Blo11g00365 297 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Blo11g00365 297 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 38 281 - -
Blo11g00365 297 MobiDBLite consensus disorder prediction 176 200 - -
Blo11g00365 297 CDD bHLH_AtIND_like 196 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00365 Blo-Chr11:3088018 Blo17g00860 Blo-Chr17:28076507 5.90E-24 dispersed
Blo10g00204 Blo-Chr10:2582902 Blo11g00365 Blo-Chr11:3088018 9.84E-155 transposed
Blo10g00307 Blo-Chr10:4652003 Blo11g00365 Blo-Chr11:3088018 2.44E-15 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12903 PF00010 HLH 1.40E-08 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00365 - - qsu:111995224 235.728