Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00372 ATGGCTTCAATCCCTCGATTCGCTATTCTTCTCGTTCTCTCCCTGTGCGTTATCTCCTTTTCCGAAGCTCGGCCATGCAAGACCTTCTTCATATCCTCCTATTCCTTCTCCGTCCAGCGCCATCAAAACCCTAATTCTCCTCATCTTACCCGACCTACCGGGTTCGTTACAATTTTTACCGAAATCAGGCAACCTGATTCATTCTCTGTCGAGTCGTCAAGAGTTTTCTTCGATCCCCGTGGCTTTCCGTCCTCCGACGGCCGAGATGAGATCGAGTTGGAGGTTGTAGACGAGAGGCCTCCTCTTCGTCTCCGCCCTCAAGAACCGCAATTCGCCACTGATTTTCCGGCAGAATTTTCGTATGATTTTACTTCTCTGCGTGATCGCACCAAAGATATTCTAAGTGTTGTTGTCGCTCTGCTGTTTGGTGTCGGTTGCGGAGCTCTCACTGCTGCCACCATGTATTTGGCATATTCCCTCTTCTCCAACCGCTTCCAGGACCGGTATTCTCTCTACGGAGGCTATAGTGATGACGACGAGGATGATGGAAACGATAGCGCTGATGATTCTGATTTGAAGAAGATGGGCTATGTTACGATTCCAGCTGAGTCAACCCCTTCTCCAGCTAAAGCCGTGCTTTCAACTTCAGGTTTTGGACAGCAGGATCATGACGGAGGCGAGAAGAAGTGCTTAAATTCAGAGCTGTGGCATGCATGCGCGGGGCCCCTCGTGTCGCTCCCAACTGCTGGGACTCGTGTCGTCTACTTTCCTCAGGGTCACAGTGAGCAGGTTGCTGCCACAACCAACAAAGAAGTTGATGGGCACATACCCAATTATCCAAACTTACCGCCCCAGCTCATATGTCAGCTTCATAATGTCACCATGCATGCAGATGTGGAAAGTGATGAAGTATATGCACAAATGACATTACAGCCGTTGACACCCCAAGAGCAGAAGGATACATTTCTTCCTATGGAGTTGGGGATCCCAAGCAAACAGCCCAGTAACTATTTTTGCAAGACATTGACAGCAAGTGACACCAGCACTCATGGAGGTTTCTCTGTTCCCAGACGTGCTGCTGAAAAAGTTTTTCCCCCTCTGGATTTTACACAACAGCCCCCAGCTCAAGAACTTATGGCAAGAGACCTGCATGATGTTGAGTGGAAATTTAGGCACATTTTTCGAGGAGATTCAGTTCTCTTTATCTGGAATGAAAAAAATCAGCTGCTATTGGGCATTCGCCGTGCCACGCGACCTCAAACTGTGATGCCATCATCTGTTCTATCAAGTGACAGTATGCATATAGGACTTCTTGCTGCTGCTGCTCATGCTGCTGCAACAAATAGCTGTTTCACAGTTTTTTATAACCCTAGGGCTAGTCCATCTGAGTTTGTTATTCCTCTTTCAAAGTATGTCAAAGCTGTATTTCATACTCGTGTTTCAGTGGGGATGCGCTTTCGAATGCTGTTTGAGACAGAAGAGTCAAGTGTTCGGAGGTACATGGGTACAATTACAGGGATAAGTGATCTAGATCCTGTCCGTTGGTCTAATTCCCATTGGCGTTCTGTCAAGGTTGGTTGGGATGAATCGACTGCCGGTGATAGGCAACCTAGAGTATCTTTGTGGGAAATTGAGCCATTGACAACGTTTCCCATGTATCCTTCTCTTTTTCCACTCAGACTAAAACGTCCATGGCATCCTGGGGCCTCATCATTACTGGATTCCAGAGACGAAGCGGCTAATGGGCTAATGTGGCTAAGAGGGGGAACAGGGGAACAAGGACTACAATCTCTCAATTTTCAGTCTGTTGGTATGTTTCCCTGGTTGCAACAAAGACTTGATTCGCCATTGCTTGTATCGGATCATAATCAGCCTTACCAGACCATGCTGGCGGCTGGTATGCAGAACCTTGGAAGTGGTGAACTTCTAAGACAGCAAATGATCCACCTTCAACAGCCTTTCCAATATCTTCAGCAGCCTAACAGTCGTCATTCGCATCTGCAAATGCCACAGCAGTCACAGCAGCAGATGGGTCAACAATCTGTGCTTCCTGGTGCCATGCAGCCACAATCCCAACCTTTGGCAGAGAATTTACCCCAGCACTTCTTGCAGCAAACATTAAATAATCAATCCGAGCAACAGCCAAATCAGCAATCACACTCTTATCATGCGGCTGTTCAGGCTCAGAGCACCCAGCTTCATCAAGGTCAGCAATCAAATGTGCCTTCGCCAACCTTTCCTGGAACAGACTTTATGGATTCAAGCTCCAAGTTCTCTTCTTCCATGTCCCCAAGGCAAAATGTGCTTGGTTCATCATGTCCCGATACTGGTGGCAGTTTCTCACACTTATATCGAAGTCAGTCTGGGATATCAGAGCACCCATCCCATCAATCATCCACTTCCAAATATGGTCATTCTCACGCCAATGTTCAAACTAATTTTCCTTCATTTCCTGGGAGAGACTCTATGGTGGAGCTGAGAAATTGTAACACGGAGTCTCCCAATCCCATTGTTTTTGGTGTGAATATTGATTCCTCTGGGCTTCTACTTCCCAATGTCCCAAATTTTGCCTCTCATTCTATCGATGCTGATTCCTCCACCATGCCATTAGGGGATTCTGGATTTCAAAGTTCCCTGTATGGTTGTGTCCAAGACTCTTCTGAGCTATTACGCAGTTCAGAGCAAGTTGATCCACCAACACCCACCCGGACATTTGTGAAGGTTTACAAGTCGGGATCAATTGGACGCTCTCTTGACATCTCCCGGTTCAACAGCTACCATGAGTTGCGGGAGGAGTTGGCTCAGATGTTTGGCATTGAGGGAAAGTTGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTTTTTGTCGACAGGGAGAATGATGTGCTTCTCCTTGGAGATGACCCATGGGAGGCATTTGTGAACAACGTTTGGTATATCAAAATACTTTCACCTGAAGATTTTCAGAAAATGGGGGAGCAGGCGATTGAATCATTCGGCACAAATATAGGTCAGCGGCCGAATAGTAGTGGTGGGGAAGCTCACTCTGGGTTTCCATCTCTCGGCCCCCTGGAATACTAA 3081 47.29 MASIPRFAILLVLSLCVISFSEARPCKTFFISSYSFSVQRHQNPNSPHLTRPTGFVTIFTEIRQPDSFSVESSRVFFDPRGFPSSDGRDEIELEVVDERPPLRLRPQEPQFATDFPAEFSYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFSNRFQDRYSLYGGYSDDDEDDGNDSADDSDLKKMGYVTIPAESTPSPAKAVLSTSGFGQQDHDGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVESDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMARDLHDVEWKFRHIFRGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGASSLLDSRDEAANGLMWLRGGTGEQGLQSLNFQSVGMFPWLQQRLDSPLLVSDHNQPYQTMLAAGMQNLGSGELLRQQMIHLQQPFQYLQQPNSRHSHLQMPQQSQQQMGQQSVLPGAMQPQSQPLAENLPQHFLQQTLNNQSEQQPNQQSHSYHAAVQAQSTQLHQGQQSNVPSPTFPGTDFMDSSSKFSSSMSPRQNVLGSSCPDTGGSFSHLYRSQSGISEHPSHQSSTSKYGHSHANVQTNFPSFPGRDSMVELRNCNTESPNPIVFGVNIDSSGLLLPNVPNFASHSIDADSSTMPLGDSGFQSSLYGCVQDSSELLRSSEQVDPPTPTRTFVKVYKSGSIGRSLDISRFNSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYIKILSPEDFQKMGEQAIESFGTNIGQRPNSSGGEAHSGFPSLGPLEY 1026
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3154567 3168993 - BLOR03248 Blo11g00372 66572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00372 1026 CDD B3_DNA 337 415 IPR003340 GO:0003677
Blo11g00372 1026 ProSiteProfiles PB1 domain profile. 903 987 IPR000270 GO:0005515
Blo11g00372 1026 MobiDBLite consensus disorder prediction 708 810 - -
Blo11g00372 1026 Gene3D - 479 551 - -
Blo11g00372 1026 Gene3D - 336 398 IPR015300 -
Blo11g00372 1026 PANTHER AUXIN RESPONSE FACTOR 8 213 396 - -
Blo11g00372 1026 MobiDBLite consensus disorder prediction 1001 1026 - -
Blo11g00372 1026 Pfam Auxin response factor 441 524 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo11g00372 1026 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 396 1003 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo11g00372 1026 SUPERFAMILY CAD & PB1 domains 896 977 - -
Blo11g00372 1026 SMART B3_2 338 417 IPR003340 GO:0003677
Blo11g00372 1026 Pfam AUX/IAA family 900 986 IPR033389 -
Blo11g00372 1026 SUPERFAMILY DNA-binding pseudobarrel domain 322 444 IPR015300 -
Blo11g00372 1026 PANTHER AUXIN RESPONSE FACTOR 8 396 1003 - -
Blo11g00372 1026 MobiDBLite consensus disorder prediction 1001 1015 - -
Blo11g00372 1026 Gene3D - 900 992 - -
Blo11g00372 1026 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 213 396 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo11g00372 1026 MobiDBLite consensus disorder prediction 660 692 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00372 Blo-Chr11:3154567 Blo16g00853 Blo-Chr16:35921520 1.20E-30 dispersed
Blo08g00564 Blo-Chr8:18894680 Blo11g00372 Blo-Chr11:3154567 0 transposed
Blo11g00225 Blo-Chr11:1827807 Blo11g00372 Blo-Chr11:3154567 0 transposed
Blo10g00229 Blo-Chr10:3069226 Blo11g00372 Blo-Chr11:3154567 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00372 - - csv:101208098 1283.47