Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00401 ATGGCTTCTATGAACTGGCTTGGTTTCTCCCTTTCTCCCCAGGAGTTTTCTTCACAAGCAGATGAAGATCAGTCTGCCCAAAGCTCGGTTTCCCGCCTCGGATTCGACTCCGATGAAATCTCCGGCCATGTCTCGGGCGACTGCTTTGATCACTCTTCTACTCCCTCTCTTATTCTCCCTCCTCCTTTTGGCCTTCTTGAATCTTACAACCATCGCCCCAACTGGAACTTTAAGAGTACGGCGGTGAACTCAGACAACAACTACAAAGAAAACTCGTCAGAACTTTCAATTTTAATGGCTACCACTTCATGCAGTAGCCGAAACATAGAAACCCATCATCAACCGAAGCTCGAAAACTTCCTCGGCCGCGAAAACCCAAATTCCTTCATATACGCAGCAAATGCCGCCATCGGAGATGGAGTTGACGGTGGAGCTAATGGAAGTAGTGTTAATAGTAGCTCTATTGGGTTGTCAATGGTAAAGACATGGCTAAGAAGCCAACCAACACATTCCATTGCTGAGAATAAGAACGATGATGGTGGATCAAAAACCAGAAATGCACAAAGTTTGTCACTTTCTATGAGCACTGGTTCGAGTTCGCCATTGCCACTGCTCCAAACTAGCTCTGCCGGAAATGGCGGTGGGGAGAGTTCTTCGTCGCAGAATAAGCAAATTAAGACTTCATCTGGTATGGAGGCCAAAAATGGCGCCATTGAATGTGTGCCAAGAAAGTCCATTGATACATTTGGACAAAGAACTTCCATTTATCGTGGCGTAACAAGGCATCGATGGACTGGTAGATACGAGGCTCATCTGTGGGACAACAGTTGCAGAAGAGAAGGACAAACTCGGAAAGGAAGACAAGGAGGTTATGATAAAGAAGATAAAGCAGCAAGAGCCTATGATTTAGCAGCACTTAAATATTGGGGTACCACTACCACTACAAATTTCCCAATTAGCAACTACGAAAAAGAAATAGAAGAAATGAAGAACATGACGAGACAAGAATACGTTGCATCTCTCAGAAGGAAGAGTAGTGGGTTTTCTCGTGGAGCTTCGATTTATCGTGGAGTAACGAGACACCATCAACATGGAAGATGGCAAGCAAGGATTGGACGAGTTGCAGGAAACAAAGACCTGTATTTAGGAACTTTCAGCACTCAAGAGGAAGCTGCAGAGGCTTACGACATTGCTGCCATAAAGTTCAGGGGGCTAAATGCAGTGACAAATTTTGATATGAACAAATACGATGTAAAATCAATCTTGGAAAGCAGTACTCTCCCCATTGGAGGAGCGTCAAAGAGATTGAAAGATGTTGATCAAGCTGAGATCATGTCCGTCGACGGGCTAAGAACAGGCGAGGAATCTATTTCTCAACTCACCGACCACGGAATGGGCGGCTACGGCAGCTCGAACCACCATGCCTGGCCGGGTTTTTCCTTCCAACAAGCTCAGTTTCAGCCCTACAATGGCTTCCACTACCCTTATGGACAAAGGGGTTGGTGTAAGCAAGAGCAAGACTCTGAGGTGGTCTCCCATGGCTTCCATGATCTTCACCAGCTTCAAACTGGAAACACCCACAATTTCTTTCAGCATAATTCTTCTCTACACAATCTGACAGTGATGGATTCTTCCTCAATGGAGCATAGTTCTGGTTCTAACTCCATTCTCTACAGCAATGGAGATGGAGGAGATGGAGGAAATAACAACAGCAATGGTGGAGTTATCGGATTTGGAAGCTGCAACAATGGCGGCGGATATGGGATTCCGGTTGGAGCAACGATAATTTCAAATGATCATGAAAATGGCGGTGGAGGGTACGAGAATCTTTTCGGAAATTCAGTGGATCCTTATCAGGGAAGGAACTTGTATTATCTGTCGCAACAATCACCAGTATCAACGGCTTTGATTAAACCTAGCGCATATGATCAAGGGTCAGCGTGCAACAACTGGGTCCCAACTGCAGTTCCAACCCTAGCTCCGAGGCGAAGAAAGAAGAATGATGGAGATTCCGTCTACCGCTTCGACTTCTTGTCCTTCGTCTCCTCGCTGGAATCTCGAAAGGCCTTTCCTCACCGGCCGTTTTCATCAGTTCCTTCACTTCGTTTCTTTAATTGTGGTAAAAATATGTTCAAGCTGAAGAGTTTTGTTCCATTGCAACAGATTTCCCAGTTTGAATTTGTCGAAGAAACAAAGGCTGCATCTCGTTTAAGTGAAGGAAAAGGGTATGCCAATGATGCCTTCAGCAACATGAGATTGGATAACGCCATAGGCTGTTACGACACTGCTGTTCAGGAACTTATAGTGATAGATGATCTCCTTTCTGTATTGGTTGGTATTGAAGGACGCTATATTTCAATTAAGCGAGTTCGTGGAAAAGAAGGTGATGTTACTTGCCAGATTGATTCTTCTATGGATTTAGCGCTTCAGGAACTAGTGAAAAGAATATTTCCTTTATGTGAGAGCTTTATCTTGATTAATCAGTTCGTGGAAAGAAGGTCTCAGTTCAAAGATGGCTTAGTTAATCATGCCTTTGCTGCTGCATTGAGAGCACTTCTTTTAGATTACCAAGCTATGGTTGCCCAGCTTGAGCACCAGTTCCGACTTGGAAGACTATCCATACAAGGATTGTGGTTTTATTGTCAGCCCATGATGGGGTCAATGCAAGCATTGTCTGCTGTAATACAAAAGGCTTTGGGTAATAATTATGCAGGTTCTGCAGTTCTTAATCTGTTGCTTGGCCAGGCTAAGGCTATGGCTGGTGATGGCTCGGTAAGGTCTTTGCTCGAAAAAATGATAGAATGTTCAAGCAATGCTTATCTAACCATCCTAGAAAGGTGGGTCCATGAAGGAATTATTGATGATCCTTATGGTGAATTTTTCATTGCAGAAAACAAATCTATCCAAAAGGAGAGCCTGTATCAGGATTATGATGCCAAGTATTGGAAACAGCGCTACAGCCTCAAGGATGGCATTCCTAGCTTTCTGTCAACTACTGCTGAAACTATTTTGACGACCGGAAAATATTTAAATGTCATGAGAGAGTGTGGCCACAATGTTCAGGTCCCTGTATCAGAAAATTCAAAATTAATGAGCTTCGGCTCGAATCATCAATATCTGGAGTGCATTAAAGCTGCTTATGATTTTGCTAGCAGTGAGCTTCTAAAACTCATCAAAGAAAAGTGTGATCTAATGGGGAAGTTGCGATCGATAAAGCATTATCTTCTACTTGATCAGATCTACTATGTACACCCACCGAAGGAGAAGTCAATTTCTCAAATTTCACCATGGGGACGGGGTGATTTCTTGGTTCATTTTATGGACATTGCTCGAGAAGAACTAGCAAAGAAGGTCGATGAAATTTCAGAGGAGAAGTTACAGTCTTTACTAGACCTTGCTCTGCGAAGCACAGCAGCCGCTGCAGATCCTTGTCACGAGGATTTAACATGCTGCGTGGAAAGATCATCTCTGCCCAAAAGCTTACGTAGACTCAAGGTTCCAATTGATAGCAGGATGAATCTTGATGATAGTGATCTAGAGGAACCATTAAACATCAATGGGCTTGTAACCTTTTCTTTAAGTTATAAGGTTAGATGGCCATTATCTATTGTTATATCAAGAAAAGCACTAGCAAAATACCAGATAATTTTCCGCTTTCTTTTCCACTGTAAACATGTGGAAAGGCAGCTTTGTGGGGCATGGCAAGTTCATCAAGGAGTTCGTTCTCTTACAATGCGCGGTACTTCCATCCCAAGATCATCCCTACTTTGCCGTAGTATGCTTAAGTTTATCAATAGCCTTTTACACTATCTGACATTTGAGGCAGGTTCTTACTTTGAAATAGCTAGAGCCTGTCTATATCATTTATTGCATGTTATCGAACCAAACTGGCATGCAATGCATAATAGACTCCAGACTGCAAAAAGCATAGACGAGGTTATCCAACACCACGATGTCTTCCTTGATAAGTGTCTGAGAGAATGTTTGCTTCTTTTGCCAGAATTGCTTAAGAAGGTGGAGAGTTTGAAGGCATTGTGTTTGCAATATGCAGCAGCAACTCAATGGTTAATCGCGTCATCAATTGATCTACCGAAGCGCGAAGAGATATCCGATGACCCCGTTGGCTGCGACAAAACTAAACAATGGACTAATTCGATAAGACTGAAACGAGATTCGATAATGTCACAACACAATGGTATTTCATATTCTGCAATGCGTAAACCGAAGGCTGAAGCGAAGGAAATTCAGCAAGTAAAATCACCAATGCTATCAAAGCCTGGACAAAAGGGTTCTAAAAGGAAGAGGAAGGTTGAATCTCCAGTGATGTTGCAGCAGGAAGAAAGATCAAATTCGGATTCTTTGCCTGATTCTTCGACGTCTGGAAGTGAGTATCGTGCATTGAGAAGGAAATATTTGGTTATGGAAGAAGAGAGCTTTACTTTAGGGACGGAACTGCGAGAGGTTGAAGACGAGGTTAAGGCCCTTGAGGATGAAAAGCTTGCTCTTTTGGATGAGCTTGTTGTTCTAGAAGGCCTGATTGATCGTTCAGAGCCGCAACTCGATCAATCTCGCCCATCTTAA 4581 43.24 MASMNWLGFSLSPQEFSSQADEDQSAQSSVSRLGFDSDEISGHVSGDCFDHSSTPSLILPPPFGLLESYNHRPNWNFKSTAVNSDNNYKENSSELSILMATTSCSSRNIETHHQPKLENFLGRENPNSFIYAANAAIGDGVDGGANGSSVNSSSIGLSMVKTWLRSQPTHSIAENKNDDGGSKTRNAQSLSLSMSTGSSSPLPLLQTSSAGNGGGESSSSQNKQIKTSSGMEAKNGAIECVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEDKAARAYDLAALKYWGTTTTTNFPISNYEKEIEEMKNMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMNKYDVKSILESSTLPIGGASKRLKDVDQAEIMSVDGLRTGEESISQLTDHGMGGYGSSNHHAWPGFSFQQAQFQPYNGFHYPYGQRGWCKQEQDSEVVSHGFHDLHQLQTGNTHNFFQHNSSLHNLTVMDSSSMEHSSGSNSILYSNGDGGDGGNNNSNGGVIGFGSCNNGGGYGIPVGATIISNDHENGGGGYENLFGNSVDPYQGRNLYYLSQQSPVSTALIKPSAYDQGSACNNWVPTAVPTLAPRRRKKNDGDSVYRFDFLSFVSSLESRKAFPHRPFSSVPSLRFFNCGKNMFKLKSFVPLQQISQFEFVEETKAASRLSEGKGYANDAFSNMRLDNAIGCYDTAVQELIVIDDLLSVLVGIEGRYISIKRVRGKEGDVTCQIDSSMDLALQELVKRIFPLCESFILINQFVERRSQFKDGLVNHAFAAALRALLLDYQAMVAQLEHQFRLGRLSIQGLWFYCQPMMGSMQALSAVIQKALGNNYAGSAVLNLLLGQAKAMAGDGSVRSLLEKMIECSSNAYLTILERWVHEGIIDDPYGEFFIAENKSIQKESLYQDYDAKYWKQRYSLKDGIPSFLSTTAETILTTGKYLNVMRECGHNVQVPVSENSKLMSFGSNHQYLECIKAAYDFASSELLKLIKEKCDLMGKLRSIKHYLLLDQIYYVHPPKEKSISQISPWGRGDFLVHFMDIAREELAKKVDEISEEKLQSLLDLALRSTAAAADPCHEDLTCCVERSSLPKSLRRLKVPIDSRMNLDDSDLEEPLNINGLVTFSLSYKVRWPLSIVISRKALAKYQIIFRFLFHCKHVERQLCGAWQVHQGVRSLTMRGTSIPRSSLLCRSMLKFINSLLHYLTFEAGSYFEIARACLYHLLHVIEPNWHAMHNRLQTAKSIDEVIQHHDVFLDKCLRECLLLLPELLKKVESLKALCLQYAAATQWLIASSIDLPKREEISDDPVGCDKTKQWTNSIRLKRDSIMSQHNGISYSAMRKPKAEAKEIQQVKSPMLSKPGQKGSKRKRKVESPVMLQQEERSNSDSLPDSSTSGSEYRALRRKYLVMEEESFTLGTELREVEDEVKALEDEKLALLDELVVLEGLIDRSEPQLDQSRPS 1526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3476505 3494036 - BLOR03277 Blo11g00401 66601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00401 1526 SUPERFAMILY DNA-binding domain 353 413 IPR016177 GO:0003677
Blo11g00401 1526 CDD AP2 353 412 IPR001471 GO:0003700|GO:0006355
Blo11g00401 1526 Gene3D AP2/ERF domain 354 414 IPR036955 GO:0003700|GO:0006355
Blo11g00401 1526 Gene3D AP2/ERF domain 255 320 IPR036955 GO:0003700|GO:0006355
Blo11g00401 1526 ProSiteProfiles AP2/ERF domain profile. 354 412 IPR001471 GO:0003700|GO:0006355
Blo11g00401 1526 Coils Coil 1107 1127 - -
Blo11g00401 1526 Pfam Gamma tubulin complex component N-terminal 770 1061 IPR041470 -
Blo11g00401 1526 Coils Coil 846 866 - -
Blo11g00401 1526 MobiDBLite consensus disorder prediction 171 236 - -
Blo11g00401 1526 Pfam Gamma tubulin complex component C-terminal 1098 1275 IPR040457 GO:0043015
Blo11g00401 1526 Pfam Gamma tubulin complex component C-terminal 1287 1357 IPR040457 GO:0043015
Blo11g00401 1526 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 587 - -
Blo11g00401 1526 Coils Coil 1478 1512 - -
Blo11g00401 1526 MobiDBLite consensus disorder prediction 1401 1462 - -
Blo11g00401 1526 Pfam AP2 domain 255 310 IPR001471 GO:0003700|GO:0006355
Blo11g00401 1526 Pfam AP2 domain 354 404 IPR001471 GO:0003700|GO:0006355
Blo11g00401 1526 CDD AP2 254 320 IPR001471 GO:0003700|GO:0006355
Blo11g00401 1526 SMART rav1_2 354 418 IPR001471 GO:0003700|GO:0006355
Blo11g00401 1526 SMART rav1_2 255 324 IPR001471 GO:0003700|GO:0006355
Blo11g00401 1526 Gene3D - 1064 1402 IPR042241 -
Blo11g00401 1526 PRINTS Ethylene responsive element binding protein signature 256 267 IPR001471 GO:0003700|GO:0006355
Blo11g00401 1526 PRINTS Ethylene responsive element binding protein signature 394 414 IPR001471 GO:0003700|GO:0006355
Blo11g00401 1526 SUPERFAMILY DNA-binding domain 254 320 IPR016177 GO:0003677
Blo11g00401 1526 MobiDBLite consensus disorder prediction 1443 1462 - -
Blo11g00401 1526 PANTHER BNAC02G44180D PROTEIN 5 587 - -
Blo11g00401 1526 MobiDBLite consensus disorder prediction 182 231 - -
Blo11g00401 1526 ProSiteProfiles AP2/ERF domain profile. 255 318 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00992 Blo-Chr3:36199389 Blo11g00401 Blo-Chr11:3476505 1.31E-109 dispersed
Blo08g00468 Blo-Chr8:10549400 Blo11g00401 Blo-Chr11:3476505 2.66E-116 dispersed
Blo11g00401 Blo-Chr11:3476505 Blo12g00998 Blo-Chr12:27991434 3.95E-106 dispersed
Blo12g00614 Blo-Chr12:24417688 Blo11g00401 Blo-Chr11:3476505 1.44E-31 dispersed
Blo17g00353 Blo-Chr17:3726507 Blo11g00401 Blo-Chr11:3476505 1.02E-06 dispersed
Blo11g00401 Blo-Chr11:3476505 Blo03g01367 Blo-Chr3:40121441 6.10E-115 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12905 PF17681 GCP_N_terminal 4.50E-70 CL0540 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00401 K16569 - qsu:112036269 933.71