Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00401 | ATGGCTTCTATGAACTGGCTTGGTTTCTCCCTTTCTCCCCAGGAGTTTTCTTCACAAGCAGATGAAGATCAGTCTGCCCAAAGCTCGGTTTCCCGCCTCGGATTCGACTCCGATGAAATCTCCGGCCATGTCTCGGGCGACTGCTTTGATCACTCTTCTACTCCCTCTCTTATTCTCCCTCCTCCTTTTGGCCTTCTTGAATCTTACAACCATCGCCCCAACTGGAACTTTAAGAGTACGGCGGTGAACTCAGACAACAACTACAAAGAAAACTCGTCAGAACTTTCAATTTTAATGGCTACCACTTCATGCAGTAGCCGAAACATAGAAACCCATCATCAACCGAAGCTCGAAAACTTCCTCGGCCGCGAAAACCCAAATTCCTTCATATACGCAGCAAATGCCGCCATCGGAGATGGAGTTGACGGTGGAGCTAATGGAAGTAGTGTTAATAGTAGCTCTATTGGGTTGTCAATGGTAAAGACATGGCTAAGAAGCCAACCAACACATTCCATTGCTGAGAATAAGAACGATGATGGTGGATCAAAAACCAGAAATGCACAAAGTTTGTCACTTTCTATGAGCACTGGTTCGAGTTCGCCATTGCCACTGCTCCAAACTAGCTCTGCCGGAAATGGCGGTGGGGAGAGTTCTTCGTCGCAGAATAAGCAAATTAAGACTTCATCTGGTATGGAGGCCAAAAATGGCGCCATTGAATGTGTGCCAAGAAAGTCCATTGATACATTTGGACAAAGAACTTCCATTTATCGTGGCGTAACAAGGCATCGATGGACTGGTAGATACGAGGCTCATCTGTGGGACAACAGTTGCAGAAGAGAAGGACAAACTCGGAAAGGAAGACAAGGAGGTTATGATAAAGAAGATAAAGCAGCAAGAGCCTATGATTTAGCAGCACTTAAATATTGGGGTACCACTACCACTACAAATTTCCCAATTAGCAACTACGAAAAAGAAATAGAAGAAATGAAGAACATGACGAGACAAGAATACGTTGCATCTCTCAGAAGGAAGAGTAGTGGGTTTTCTCGTGGAGCTTCGATTTATCGTGGAGTAACGAGACACCATCAACATGGAAGATGGCAAGCAAGGATTGGACGAGTTGCAGGAAACAAAGACCTGTATTTAGGAACTTTCAGCACTCAAGAGGAAGCTGCAGAGGCTTACGACATTGCTGCCATAAAGTTCAGGGGGCTAAATGCAGTGACAAATTTTGATATGAACAAATACGATGTAAAATCAATCTTGGAAAGCAGTACTCTCCCCATTGGAGGAGCGTCAAAGAGATTGAAAGATGTTGATCAAGCTGAGATCATGTCCGTCGACGGGCTAAGAACAGGCGAGGAATCTATTTCTCAACTCACCGACCACGGAATGGGCGGCTACGGCAGCTCGAACCACCATGCCTGGCCGGGTTTTTCCTTCCAACAAGCTCAGTTTCAGCCCTACAATGGCTTCCACTACCCTTATGGACAAAGGGGTTGGTGTAAGCAAGAGCAAGACTCTGAGGTGGTCTCCCATGGCTTCCATGATCTTCACCAGCTTCAAACTGGAAACACCCACAATTTCTTTCAGCATAATTCTTCTCTACACAATCTGACAGTGATGGATTCTTCCTCAATGGAGCATAGTTCTGGTTCTAACTCCATTCTCTACAGCAATGGAGATGGAGGAGATGGAGGAAATAACAACAGCAATGGTGGAGTTATCGGATTTGGAAGCTGCAACAATGGCGGCGGATATGGGATTCCGGTTGGAGCAACGATAATTTCAAATGATCATGAAAATGGCGGTGGAGGGTACGAGAATCTTTTCGGAAATTCAGTGGATCCTTATCAGGGAAGGAACTTGTATTATCTGTCGCAACAATCACCAGTATCAACGGCTTTGATTAAACCTAGCGCATATGATCAAGGGTCAGCGTGCAACAACTGGGTCCCAACTGCAGTTCCAACCCTAGCTCCGAGGCGAAGAAAGAAGAATGATGGAGATTCCGTCTACCGCTTCGACTTCTTGTCCTTCGTCTCCTCGCTGGAATCTCGAAAGGCCTTTCCTCACCGGCCGTTTTCATCAGTTCCTTCACTTCGTTTCTTTAATTGTGGTAAAAATATGTTCAAGCTGAAGAGTTTTGTTCCATTGCAACAGATTTCCCAGTTTGAATTTGTCGAAGAAACAAAGGCTGCATCTCGTTTAAGTGAAGGAAAAGGGTATGCCAATGATGCCTTCAGCAACATGAGATTGGATAACGCCATAGGCTGTTACGACACTGCTGTTCAGGAACTTATAGTGATAGATGATCTCCTTTCTGTATTGGTTGGTATTGAAGGACGCTATATTTCAATTAAGCGAGTTCGTGGAAAAGAAGGTGATGTTACTTGCCAGATTGATTCTTCTATGGATTTAGCGCTTCAGGAACTAGTGAAAAGAATATTTCCTTTATGTGAGAGCTTTATCTTGATTAATCAGTTCGTGGAAAGAAGGTCTCAGTTCAAAGATGGCTTAGTTAATCATGCCTTTGCTGCTGCATTGAGAGCACTTCTTTTAGATTACCAAGCTATGGTTGCCCAGCTTGAGCACCAGTTCCGACTTGGAAGACTATCCATACAAGGATTGTGGTTTTATTGTCAGCCCATGATGGGGTCAATGCAAGCATTGTCTGCTGTAATACAAAAGGCTTTGGGTAATAATTATGCAGGTTCTGCAGTTCTTAATCTGTTGCTTGGCCAGGCTAAGGCTATGGCTGGTGATGGCTCGGTAAGGTCTTTGCTCGAAAAAATGATAGAATGTTCAAGCAATGCTTATCTAACCATCCTAGAAAGGTGGGTCCATGAAGGAATTATTGATGATCCTTATGGTGAATTTTTCATTGCAGAAAACAAATCTATCCAAAAGGAGAGCCTGTATCAGGATTATGATGCCAAGTATTGGAAACAGCGCTACAGCCTCAAGGATGGCATTCCTAGCTTTCTGTCAACTACTGCTGAAACTATTTTGACGACCGGAAAATATTTAAATGTCATGAGAGAGTGTGGCCACAATGTTCAGGTCCCTGTATCAGAAAATTCAAAATTAATGAGCTTCGGCTCGAATCATCAATATCTGGAGTGCATTAAAGCTGCTTATGATTTTGCTAGCAGTGAGCTTCTAAAACTCATCAAAGAAAAGTGTGATCTAATGGGGAAGTTGCGATCGATAAAGCATTATCTTCTACTTGATCAGATCTACTATGTACACCCACCGAAGGAGAAGTCAATTTCTCAAATTTCACCATGGGGACGGGGTGATTTCTTGGTTCATTTTATGGACATTGCTCGAGAAGAACTAGCAAAGAAGGTCGATGAAATTTCAGAGGAGAAGTTACAGTCTTTACTAGACCTTGCTCTGCGAAGCACAGCAGCCGCTGCAGATCCTTGTCACGAGGATTTAACATGCTGCGTGGAAAGATCATCTCTGCCCAAAAGCTTACGTAGACTCAAGGTTCCAATTGATAGCAGGATGAATCTTGATGATAGTGATCTAGAGGAACCATTAAACATCAATGGGCTTGTAACCTTTTCTTTAAGTTATAAGGTTAGATGGCCATTATCTATTGTTATATCAAGAAAAGCACTAGCAAAATACCAGATAATTTTCCGCTTTCTTTTCCACTGTAAACATGTGGAAAGGCAGCTTTGTGGGGCATGGCAAGTTCATCAAGGAGTTCGTTCTCTTACAATGCGCGGTACTTCCATCCCAAGATCATCCCTACTTTGCCGTAGTATGCTTAAGTTTATCAATAGCCTTTTACACTATCTGACATTTGAGGCAGGTTCTTACTTTGAAATAGCTAGAGCCTGTCTATATCATTTATTGCATGTTATCGAACCAAACTGGCATGCAATGCATAATAGACTCCAGACTGCAAAAAGCATAGACGAGGTTATCCAACACCACGATGTCTTCCTTGATAAGTGTCTGAGAGAATGTTTGCTTCTTTTGCCAGAATTGCTTAAGAAGGTGGAGAGTTTGAAGGCATTGTGTTTGCAATATGCAGCAGCAACTCAATGGTTAATCGCGTCATCAATTGATCTACCGAAGCGCGAAGAGATATCCGATGACCCCGTTGGCTGCGACAAAACTAAACAATGGACTAATTCGATAAGACTGAAACGAGATTCGATAATGTCACAACACAATGGTATTTCATATTCTGCAATGCGTAAACCGAAGGCTGAAGCGAAGGAAATTCAGCAAGTAAAATCACCAATGCTATCAAAGCCTGGACAAAAGGGTTCTAAAAGGAAGAGGAAGGTTGAATCTCCAGTGATGTTGCAGCAGGAAGAAAGATCAAATTCGGATTCTTTGCCTGATTCTTCGACGTCTGGAAGTGAGTATCGTGCATTGAGAAGGAAATATTTGGTTATGGAAGAAGAGAGCTTTACTTTAGGGACGGAACTGCGAGAGGTTGAAGACGAGGTTAAGGCCCTTGAGGATGAAAAGCTTGCTCTTTTGGATGAGCTTGTTGTTCTAGAAGGCCTGATTGATCGTTCAGAGCCGCAACTCGATCAATCTCGCCCATCTTAA | 4581 | 43.24 | MASMNWLGFSLSPQEFSSQADEDQSAQSSVSRLGFDSDEISGHVSGDCFDHSSTPSLILPPPFGLLESYNHRPNWNFKSTAVNSDNNYKENSSELSILMATTSCSSRNIETHHQPKLENFLGRENPNSFIYAANAAIGDGVDGGANGSSVNSSSIGLSMVKTWLRSQPTHSIAENKNDDGGSKTRNAQSLSLSMSTGSSSPLPLLQTSSAGNGGGESSSSQNKQIKTSSGMEAKNGAIECVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEDKAARAYDLAALKYWGTTTTTNFPISNYEKEIEEMKNMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMNKYDVKSILESSTLPIGGASKRLKDVDQAEIMSVDGLRTGEESISQLTDHGMGGYGSSNHHAWPGFSFQQAQFQPYNGFHYPYGQRGWCKQEQDSEVVSHGFHDLHQLQTGNTHNFFQHNSSLHNLTVMDSSSMEHSSGSNSILYSNGDGGDGGNNNSNGGVIGFGSCNNGGGYGIPVGATIISNDHENGGGGYENLFGNSVDPYQGRNLYYLSQQSPVSTALIKPSAYDQGSACNNWVPTAVPTLAPRRRKKNDGDSVYRFDFLSFVSSLESRKAFPHRPFSSVPSLRFFNCGKNMFKLKSFVPLQQISQFEFVEETKAASRLSEGKGYANDAFSNMRLDNAIGCYDTAVQELIVIDDLLSVLVGIEGRYISIKRVRGKEGDVTCQIDSSMDLALQELVKRIFPLCESFILINQFVERRSQFKDGLVNHAFAAALRALLLDYQAMVAQLEHQFRLGRLSIQGLWFYCQPMMGSMQALSAVIQKALGNNYAGSAVLNLLLGQAKAMAGDGSVRSLLEKMIECSSNAYLTILERWVHEGIIDDPYGEFFIAENKSIQKESLYQDYDAKYWKQRYSLKDGIPSFLSTTAETILTTGKYLNVMRECGHNVQVPVSENSKLMSFGSNHQYLECIKAAYDFASSELLKLIKEKCDLMGKLRSIKHYLLLDQIYYVHPPKEKSISQISPWGRGDFLVHFMDIAREELAKKVDEISEEKLQSLLDLALRSTAAAADPCHEDLTCCVERSSLPKSLRRLKVPIDSRMNLDDSDLEEPLNINGLVTFSLSYKVRWPLSIVISRKALAKYQIIFRFLFHCKHVERQLCGAWQVHQGVRSLTMRGTSIPRSSLLCRSMLKFINSLLHYLTFEAGSYFEIARACLYHLLHVIEPNWHAMHNRLQTAKSIDEVIQHHDVFLDKCLRECLLLLPELLKKVESLKALCLQYAAATQWLIASSIDLPKREEISDDPVGCDKTKQWTNSIRLKRDSIMSQHNGISYSAMRKPKAEAKEIQQVKSPMLSKPGQKGSKRKRKVESPVMLQQEERSNSDSLPDSSTSGSEYRALRRKYLVMEEESFTLGTELREVEDEVKALEDEKLALLDELVVLEGLIDRSEPQLDQSRPS | 1526 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3476505 | 3494036 | - | BLOR03277 | Blo11g00401 | 66601 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00401 | 1526 | SUPERFAMILY | DNA-binding domain | 353 | 413 | IPR016177 | GO:0003677 | |
Blo11g00401 | 1526 | CDD | AP2 | 353 | 412 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | Gene3D | AP2/ERF domain | 354 | 414 | IPR036955 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | Gene3D | AP2/ERF domain | 255 | 320 | IPR036955 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | ProSiteProfiles | AP2/ERF domain profile. | 354 | 412 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | Coils | Coil | 1107 | 1127 | - | - | |
Blo11g00401 | 1526 | Pfam | Gamma tubulin complex component N-terminal | 770 | 1061 | IPR041470 | - | |
Blo11g00401 | 1526 | Coils | Coil | 846 | 866 | - | - | |
Blo11g00401 | 1526 | MobiDBLite | consensus disorder prediction | 171 | 236 | - | - | |
Blo11g00401 | 1526 | Pfam | Gamma tubulin complex component C-terminal | 1098 | 1275 | IPR040457 | GO:0043015 | |
Blo11g00401 | 1526 | Pfam | Gamma tubulin complex component C-terminal | 1287 | 1357 | IPR040457 | GO:0043015 | |
Blo11g00401 | 1526 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 5 | 587 | - | - | |
Blo11g00401 | 1526 | Coils | Coil | 1478 | 1512 | - | - | |
Blo11g00401 | 1526 | MobiDBLite | consensus disorder prediction | 1401 | 1462 | - | - | |
Blo11g00401 | 1526 | Pfam | AP2 domain | 255 | 310 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | Pfam | AP2 domain | 354 | 404 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | CDD | AP2 | 254 | 320 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | SMART | rav1_2 | 354 | 418 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | SMART | rav1_2 | 255 | 324 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | Gene3D | - | 1064 | 1402 | IPR042241 | - | |
Blo11g00401 | 1526 | PRINTS | Ethylene responsive element binding protein signature | 256 | 267 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | PRINTS | Ethylene responsive element binding protein signature | 394 | 414 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00401 | 1526 | SUPERFAMILY | DNA-binding domain | 254 | 320 | IPR016177 | GO:0003677 | |
Blo11g00401 | 1526 | MobiDBLite | consensus disorder prediction | 1443 | 1462 | - | - | |
Blo11g00401 | 1526 | PANTHER | BNAC02G44180D PROTEIN | 5 | 587 | - | - | |
Blo11g00401 | 1526 | MobiDBLite | consensus disorder prediction | 182 | 231 | - | - | |
Blo11g00401 | 1526 | ProSiteProfiles | AP2/ERF domain profile. | 255 | 318 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00992 | Blo-Chr3:36199389 | Blo11g00401 | Blo-Chr11:3476505 | 1.31E-109 | dispersed | |
Blo08g00468 | Blo-Chr8:10549400 | Blo11g00401 | Blo-Chr11:3476505 | 2.66E-116 | dispersed | |
Blo11g00401 | Blo-Chr11:3476505 | Blo12g00998 | Blo-Chr12:27991434 | 3.95E-106 | dispersed | |
Blo12g00614 | Blo-Chr12:24417688 | Blo11g00401 | Blo-Chr11:3476505 | 1.44E-31 | dispersed | |
Blo17g00353 | Blo-Chr17:3726507 | Blo11g00401 | Blo-Chr11:3476505 | 1.02E-06 | dispersed | |
Blo11g00401 | Blo-Chr11:3476505 | Blo03g01367 | Blo-Chr3:40121441 | 6.10E-115 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12905 | PF17681 | GCP_N_terminal | 4.50E-70 | CL0540 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00401 | K16569 | - | qsu:112036269 | 933.71 |