Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00408 ATGGGGTCCTGCCTTTCTACAGAAAGCAGGTACCCTATTCCTGGATCACCAAACTCTCCTGCAAGGAGAGCTAAGAAGAGAAAATCGTCAAAAAAACGGTTTGGATCACGTTCGTCGTTTGGCAATCGAAGGGAAGAACCTCTGCATCGAATCCCTGGGAGGATGTTCTTGAATGGGTCTAGTGAAGTTGCTTCTTTGTTCACACAACAAGGTAGAAAAGGAACAAACCAAGATGCCATGATTGTCTGGGAGAATTTTGGTTTGAGAGGTGACATGATCTTCTGTGGGGTGTTTGACGGGCACGGACCGTTTGGCCATATGGTTGCTAAGAGAGTGAGGGATTCTCTTCCTCTGAAAGTGAAAGCCCAGTGGGAATTCAGTGCAGTGACTGAAGAAGTTGTCCGAGAACTCAGCGCCGATCCTAATGGAGAAACAAACAGAGATGACGATGAAGGAGGGGCTAGAGTCTCCATTGACGTTGCCGAATCGGAGAAGCCAAAAGAGATTTTTCAAACATTGAAGGAATCATTTCTAAAGGCCTCTAAAGCGATGGACAGAGAATTGAGGATGCATCCGAGTATCGATTGTTTCTGTAGCGGCTCTACGGCCGTGACTTTGGTTAAGCAGGGAAAAAATCTTGTGATTGGAAATGTTGGAGATTCCAGAGCTGTAATGGCTACTAGAGATAAAGATGACACCCTTGTTGCCATTCAGTTGACCGTCGATCTGAAGCCGAATCTTCCTGGAGAAGAAGAGAGAATTCGCAGCTGCAAAGGCCGGGTTTTTGCTCTTGAAGATGAACCAGAGGTTGCCCGAGTATGGCTGCCACACAGCGACTCCCCCGGCCTTGCTATGGCTCGTGCATTTGGAGATTTTTGTCTCAAGGATTTTGGTCTAATATCTGTCCCCGAAATTACCTCCCGTCAACTAACCGAAAAGGATGAATTCGTCGTCATGGCGACGGATGGGATATGGGACGTTTTATCGAATTCAGAGGTAGTGGATATTGTAGCATCGGCCCAGTCTCGGTCAACCGCAGCCCGAGCTGTTGTAGAGGCAGCCGTTCGAGGATGGCAGTGTAAATATCCGTCTTCCAAAGTCGATGATTGTGCTGTAGTGTGCCTATTCTTTGATTCAAACTCGAACAACTCATCAATGGCCTCGAATGCCAAATCCAAAGACTGTCTTTCCTCCGAGGTTCGAATTTGCAATGGCAATGCTGCCATTAACGAGGACGTCTCTAGGCCTAGCGATCTGAATCGCATGGGAACGATACGAACTGTCAAAGACATTATGGGTGAAGAAGAAGACGACGAGAATTTGGCCGGGACCGGAAGTAAGTGGTTGGCTCTAGAAGGTGTGTCAAGAGTAAACTCGCTGTTGACTCTGCCAAGATTTGTTCCTTCGAAGAAGGAGAAGGCCCGGTGA 1428 47.62 MGSCLSTESRYPIPGSPNSPARRAKKRKSSKKRFGSRSSFGNRREEPLHRIPGRMFLNGSSEVASLFTQQGRKGTNQDAMIVWENFGLRGDMIFCGVFDGHGPFGHMVAKRVRDSLPLKVKAQWEFSAVTEEVVRELSADPNGETNRDDDEGGARVSIDVAESEKPKEIFQTLKESFLKASKAMDRELRMHPSIDCFCSGSTAVTLVKQGKNLVIGNVGDSRAVMATRDKDDTLVAIQLTVDLKPNLPGEEERIRSCKGRVFALEDEPEVARVWLPHSDSPGLAMARAFGDFCLKDFGLISVPEITSRQLTEKDEFVVMATDGIWDVLSNSEVVDIVASAQSRSTAARAVVEAAVRGWQCKYPSSKVDDCAVVCLFFDSNSNNSSMASNAKSKDCLSSEVRICNGNAAINEDVSRPSDLNRMGTIRTVKDIMGEEEDDENLAGTGSKWLALEGVSRVNSLLTLPRFVPSKKEKAR 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3551070 3553398 - BLOR03284 Blo11g00408 66608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00408 475 PANTHER ALPHABET, ISOFORM E-RELATED 1 460 - -
Blo11g00408 475 SMART PP2C_4 52 375 IPR001932 -
Blo11g00408 475 Pfam Protein phosphatase 2C 70 355 IPR001932 -
Blo11g00408 475 Gene3D - 59 379 IPR036457 -
Blo11g00408 475 SUPERFAMILY PP2C-like 60 379 IPR036457 -
Blo11g00408 475 ProSiteProfiles PPM-type phosphatase domain profile. 63 377 IPR001932 -
Blo11g00408 475 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 460 - -
Blo11g00408 475 MobiDBLite consensus disorder prediction 1 50 - -
Blo11g00408 475 CDD PP2Cc 63 339 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01110 Blo-Chr7:31015599 Blo11g00408 Blo-Chr11:3551070 1.54E-121 dispersed
Blo10g00372 Blo-Chr10:6120224 Blo11g00408 Blo-Chr11:3551070 6.83E-107 dispersed
Blo11g00408 Blo-Chr11:3551070 Blo12g00048 Blo-Chr12:3373115 6.58E-161 dispersed
Blo13g00379 Blo-Chr13:21862877 Blo11g00408 Blo-Chr11:3551070 3.43E-94 dispersed
Blo10g00255 Blo-Chr10:3605173 Blo11g00408 Blo-Chr11:3551070 0 wgd
Blo11g00408 Blo-Chr11:3551070 Blo17g00516 Blo-Chr17:8221869 0 wgd
Blo11g00408 Blo-Chr11:3551070 Blo18g00505 Blo-Chr18:6370709 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00408 - - twl:119990449 617.461