Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00410 ATGGCGATCAGTTTCATTGACGTTGTGATAATCATCAAAACGCTCGTTCCTTTGTACTTTTCCATGGCGTTGGCCTACATTTGCGTCCGATGGATGAAGGTTTTCTCGCCGGAGCAAAACTCCGGCATCAGCCGGTTTCTGAGGATCGTCGCCATTCCACTGCTGTTCCTCAAGCTCATAGTTTCAAACGATTTTTACACTATTAACTTGAGGCTGTTTGCAGCTGATACGCTGCAGAAACTGGTGATTCTGGCGGTAGGCTTCTGTTGGAAAATATTCAGCAAAAATGGAAGTCTAGAATGGGTGATTACTTTCTTTTCACTTTCTTGCATGCCAAACACTATGATAATGGGTCTCCCTCTTCTGGACGCCATGTATGGAGTTGACTCGGCCACCATTATAATTCAAACTGTGGTTTTCCAAGGTGTTATTTGGATCAATGTCCTCCTCGCAATCCTCGAATATAGAACTGCAAAGCTTCGAATATCAAAACAATTTACTGATTCTTTTGCTGCTCCTCCTCCCGTTGCTTTGTCCATTGAATCATTTCGAATAGATTCCGACGTTTTCTCTCTGGGTCGGATCAAATCGTTACAGACAGATGATAGTATGTCGGACAGTGAGAAGATGGAAGAGGTGGCAAGGGTGGTGGAGAATCGTTCAGTCTTGTCGTCGTCTTCGAGGTTTCTGAGCTTTGATTCTGCTGAGATAGTGCCATGCAGTAGACATGGAAGTGTAGATCAGGAGTTATCGACCTGTGAAGCGATGAAGACGAAGCCTGATTTGAACAACATTAATGAGATTACAGTTCCGAGTAATTCAAAAGTTGTTGCTTCTTCCAAAGAATTTGGGATGGTTGTTGATGATCCCAAGGGAATGGAGGCCAGTTCTGCAACAGGTGAAAAGGCGGCCATTGATGTAGTTTGTGAGAAAATGAAGAAAATGGAGGAGGTGCCACCTGCACGATCTGTGACGAAGCTGATATTTTTCATGGTTTTGAAGAAGTTTTTGAGGAACCCTAACACTTATAGCAGTGTTTTAGGTCTTGCATGGTCTCTGCTGTCCTTCAAGTTCAAAATAGGAATGCCATCAGTAGTGTACAGATCAGTTGCAGCACTAGCTGACACCAGCGTTGTTATTTCCATGTTCAGCCTAGTTTATACGGCTAATATTACAGATGCGTTGTGGCAAATGAATTTGAGATCAAGCGAATCGATGGAAACTGGATCATATCCCGAGCGTCCAGGAGAGCTAGATTGTTCTTATTACATTCGAACCGGCCTATGTAGATTTGGAGCAACTTGCCGTTTTAACCATCCTCCCGACAGAAAGCTGGCAATTGCCACTGCAAGGATGAAGGGGGAATATCCGGAGAGATTTGGACAGCCGGAATATTTCTATATGAATTCTCTTCAGTACTACCTGAAGACTGCAACCTGCAAGTTTGGAGCCACATGCAAGTTTCATCATCCTCGAGACAAGGCCGGGATTGCTGGAAGAGTTTCCTTAAACGTCTTAGGATATCCGCTTCGCCCGGTTCTTTCTCTCGTCCAGAACGAGATGGAATGTGCATATTATTTAAGAACCGGACTGTGCAAATTTGGGAGTACCTGTAAATTCCATCACCCTCAACTGACGAACATGATGGTTTCCTTACATGGATCTTCTGTTTATCCGACCATCCCATCTCCGACTACTAGTCAGCAGTCGTATCAAGGAGGAATTACGGATTGGTCCAGGGCGTCTTTCGTTCCGAGTCCGAGAGGGCAGGGCCCTTCAAGTTATGCACCAGTTATTCTTCCTCAAGGACTGGTTTCAGTTCAAGGTTGGAATGCATACAGTGGTACTTTAGGATCAGTTTCTGCATCAGAGAATCAGCAGCCATTGTCGGCGAATAGTCAGGTTTATGGAGTTATACGTCAAAATGAATCTGCTAGTGTAGGATCTGAAGTATCGTTTTCTCCGTTTCGCTCGGGCTCTGTTCCTGTTGGGTACTACGCATTGCACAGGGACAATGTATTTCCCGAGAGACCTGGCCAGCCCGAGTGTCAGTTTTACATGAAAACCGGTGACTGCAAATTCGGCGTTGTTTGTAGATTCCATCATCCGAGAGAGAGGTTAATACCGGCTCCGGATTGTGTTTTGAGCCCCCTCGGCCTTCCCTTGCGTCCGGGGGAACCTTTGTGCATGTTCTATTCTCGTTATGGTATCTGCAAGTTTGGTCCGAGCTGCAAATTCGACCACCCGATGGGTATCGTCTCGCACAATCTCTTTGCATCGCAGTCGTCGGGTTATCCGGCTCGGCGCTTATTAGTTTCATCGCCTGGAGCATCGGGTCTAAATTTGTCACCTGAAGGACTGATCGCAGGAGGCCATACACAGCCGAGGAGACTTTCACTTTCAGAGACCAGACAGATGTCTTCTAGCGGCGATCGTATCGACCCAGACGGGTGA 2454 46.09 MAISFIDVVIIIKTLVPLYFSMALAYICVRWMKVFSPEQNSGISRFLRIVAIPLLFLKLIVSNDFYTINLRLFAADTLQKLVILAVGFCWKIFSKNGSLEWVITFFSLSCMPNTMIMGLPLLDAMYGVDSATIIIQTVVFQGVIWINVLLAILEYRTAKLRISKQFTDSFAAPPPVALSIESFRIDSDVFSLGRIKSLQTDDSMSDSEKMEEVARVVENRSVLSSSSRFLSFDSAEIVPCSRHGSVDQELSTCEAMKTKPDLNNINEITVPSNSKVVASSKEFGMVVDDPKGMEASSATGEKAAIDVVCEKMKKMEEVPPARSVTKLIFFMVLKKFLRNPNTYSSVLGLAWSLLSFKFKIGMPSVVYRSVAALADTSVVISMFSLVYTANITDALWQMNLRSSESMETGSYPERPGELDCSYYIRTGLCRFGATCRFNHPPDRKLAIATARMKGEYPERFGQPEYFYMNSLQYYLKTATCKFGATCKFHHPRDKAGIAGRVSLNVLGYPLRPVLSLVQNEMECAYYLRTGLCKFGSTCKFHHPQLTNMMVSLHGSSVYPTIPSPTTSQQSYQGGITDWSRASFVPSPRGQGPSSYAPVILPQGLVSVQGWNAYSGTLGSVSASENQQPLSANSQVYGVIRQNESASVGSEVSFSPFRSGSVPVGYYALHRDNVFPERPGQPECQFYMKTGDCKFGVVCRFHHPRERLIPAPDCVLSPLGLPLRPGEPLCMFYSRYGICKFGPSCKFDHPMGIVSHNLFASQSSGYPARRLLVSSPGASGLNLSPEGLIAGGHTQPRRLSLSETRQMSSSGDRIDPDG 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3563205 3573495 + BLOR03286 Blo11g00410 66610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00410 817 PANTHER PROTEIN PHOSPHATASE RELATED 377 815 - -
Blo11g00410 817 SUPERFAMILY CCCH zinc finger 419 442 IPR036855 GO:0046872
Blo11g00410 817 SUPERFAMILY CCCH zinc finger 681 707 IPR036855 GO:0046872
Blo11g00410 817 ProSiteProfiles Zinc finger C3H1-type profile. 677 705 IPR000571 GO:0046872
Blo11g00410 817 ProSiteProfiles Zinc finger C3H1-type profile. 723 751 IPR000571 GO:0046872
Blo11g00410 817 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33-RELATED 377 815 - -
Blo11g00410 817 SUPERFAMILY CCCH zinc finger 520 544 IPR036855 GO:0046872
Blo11g00410 817 MobiDBLite consensus disorder prediction 783 817 - -
Blo11g00410 817 Gene3D - 472 560 - -
Blo11g00410 817 Gene3D - 675 755 - -
Blo11g00410 817 SUPERFAMILY CCCH zinc finger 726 750 IPR036855 GO:0046872
Blo11g00410 817 Gene3D - 384 451 - -
Blo11g00410 817 SMART c3hfinal6 469 492 IPR000571 GO:0046872
Blo11g00410 817 SMART c3hfinal6 723 750 IPR000571 GO:0046872
Blo11g00410 817 SMART c3hfinal6 518 544 IPR000571 GO:0046872
Blo11g00410 817 SMART c3hfinal6 414 441 IPR000571 GO:0046872
Blo11g00410 817 SMART c3hfinal6 677 704 IPR000571 GO:0046872
Blo11g00410 817 ProSiteProfiles Zinc finger C3H1-type profile. 472 493 IPR000571 GO:0046872
Blo11g00410 817 ProSiteProfiles Zinc finger C3H1-type profile. 518 545 IPR000571 GO:0046872
Blo11g00410 817 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 725 750 IPR000571 GO:0046872
Blo11g00410 817 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 679 704 IPR000571 GO:0046872
Blo11g00410 817 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 472 492 IPR000571 GO:0046872
Blo11g00410 817 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 522 544 IPR000571 GO:0046872
Blo11g00410 817 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 419 441 IPR000571 GO:0046872
Blo11g00410 817 ProSiteProfiles Zinc finger C3H1-type profile. 414 442 IPR000571 GO:0046872
Blo11g00410 817 Pfam Membrane transport protein 11 385 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00450 Blo-Chr4:3710985 Blo11g00410 Blo-Chr11:3563205 2.70E-07 dispersed
Blo04g00708 Blo-Chr4:6495751 Blo11g00410 Blo-Chr11:3563205 1.91E-06 dispersed
Blo04g01216 Blo-Chr4:23043207 Blo11g00410 Blo-Chr11:3563205 9.24E-11 dispersed
Blo11g00410 Blo-Chr11:3563205 Blo10g00044 Blo-Chr10:418056 6.75E-100 dispersed
Blo16g00248 Blo-Chr16:5696939 Blo11g00410 Blo-Chr11:3563205 2.58E-12 dispersed
Blo10g00251 Blo-Chr10:3580778 Blo11g00410 Blo-Chr11:3563205 5.90E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12906 PF03547 Mem_trans 5.70E-64 CL0064 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00410 - - qsu:112012560 694.886