Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00430 ATGGCCTCTCTATCCTGCTCCGCCGTTGATTTGGTGCCTCTGCTCGGCGCCACGAGCTCCAACTCCACAGCCATGGCGGACTTCTTCTGTACAAGATTCAACGTCATAGCCAACAAGCTTTCCGACACTAATTATGCAGTGGATAATACTTATCTCTTATTCTCTGCGTATCTGGTTTTCGCTATGCAGCTTGGATTCGCTATGCTTTGCGCTGGATCTGTTCGAGCGAAGAACACGATGAACATTATGCTCACCAACGTCCTTGACGCCGCCGCCGGAGGCCTCTCGTACTACCTCTTTGGTTTTGCTTTCGCCTTTGGATCGCCTTCTAATGGCTTCATCGGCCGTCATTTTTTCGGTCTCAGTGATTTTCCAACCATTGCGGGAGATTACAGTTACTTTCTCTTCCAATGGGCTTTCGCGATCGCCGCCGCAGGAATTACCAGCGGTTCGATCGCCGAGAGAACGCAGTTTGTTGCTTATCTTATATACTCCTCTTTCTTGACTGGTTTCGTCTACCCGATTGTGTCTCATTGGTTCTGGTCATCTGATGGGTGGGCTAGCCCGGTCCGAAGCGACAATAACTTAATGTTCGGATCCGGGGCTATTGACTTCGCCGGATCGGGGGTTGTTCACATGGTGGGCGGGATAGCCGGGTTGTGGGGTGCGTTGATCGAAGGCCCGCGAATAGGCCGGTTCGACCGATCCGGACGATCCGTCGCGTTGCGGGGACACAGCGCGTCGCTAGTTGTTCTCGGGTCATTTTTACTTTGGTTCGGTTGGTACGGGTTCAACCCGGGATCGTTTCTGACGATCTTGAAAGCGTATGGCGAAGGAGGTACCTACTACGGACAGTGGAGTGCCGTGGGCCGAACAGCAGTCACGACCACACTGGCTGGTTCCACGGCGGCACTCACAACGCTATTCGGAAAGCGTATGATCGCTGGCCACTGGAACGTCACCGACGTGTGCAACGGACTACTCGGGGGATTCGCCGCCATCACCTCCGGCTGCTCAGTGGTTGAACCCTGGGCGGCAATAGTCTGCGGATTCGTCTCCGCCTGGGTTTTAATCGGGTTCAACATACTCGCAGAGAAGTTGAACTACGATGATCCTCTCGAAGCGGCGCAACTCCACGGCGGATGCGGGGCGTGGGGGTTGATATTCACCGGGCTCTTCGCCCAGAAGAATTACGTCAACGAGGTCTACTCGAACAAGGTAGGGAGACCGTACGGGCTATTCATGGGCGGCGGAGGAAAACTACTGGCAGCCCAAATCATCCAGATCTTGGTGATCATCGGGTGGGTCTCGGTCACAATGGGCCCACTCTTTTATGCAATGCATAAATTGAAGATATTGAGGATATCAAGAGATGATGAGATGGCAGGTATGGATCTGACTAGGCACGGAGGATTTGCTTACGTGTACCACGATCAGGATGACGGGTCAGGGAGCAAGCCCGGGTTTATGATGAACAGGGTGGAGCCCAATGCGGGAAGTCCGGTCGGCGATCTGAAACTTTCTTCCTCAGCCGTCTGA 1539 53.93 MASLSCSAVDLVPLLGATSSNSTAMADFFCTRFNVIANKLSDTNYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHFFGLSDFPTIAGDYSYFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSSDGWASPVRSDNNLMFGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTILKAYGEGGTYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRMIAGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIVCGFVSAWVLIGFNILAEKLNYDDPLEAAQLHGGCGAWGLIFTGLFAQKNYVNEVYSNKVGRPYGLFMGGGGKLLAAQIIQILVIIGWVSVTMGPLFYAMHKLKILRISRDDEMAGMDLTRHGGFAYVYHDQDDGSGSKPGFMMNRVEPNAGSPVGDLKLSSSAV 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3750084 3751622 + BLOR03306 Blo11g00430 66630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00430 512 Gene3D Ammonium transporter AmtB like domains 27 487 IPR029020 -
Blo11g00430 512 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Blo11g00430 512 MobiDBLite consensus disorder prediction 486 512 - -
Blo11g00430 512 ProSitePatterns Ammonium transporters signature. 204 229 IPR018047 GO:0008519|GO:0016020|GO:0072488
Blo11g00430 512 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Blo11g00430 512 SUPERFAMILY Ammonium transporter 45 455 - -
Blo11g00430 512 TIGRFAM amt: ammonium transporter 48 474 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo11g00430 512 Pfam Ammonium Transporter Family 51 474 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01119 Blo-Chr7:31092759 Blo11g00430 Blo-Chr11:3750084 1.03E-26 dispersed
Blo09g00283 Blo-Chr9:12124845 Blo11g00430 Blo-Chr11:3750084 2.37E-22 dispersed
Blo10g00606 Blo-Chr10:18455131 Blo11g00430 Blo-Chr11:3750084 0 dispersed
Blo11g00430 Blo-Chr11:3750084 Blo13g01047 Blo-Chr13:32778913 0 dispersed
Blo11g00430 Blo-Chr11:3750084 Blo07g01055 Blo-Chr7:30354247 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00430 K03320 K07573 qsu:112038007 834.713