Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00440 ATGCCTTCCACAAGTTTTTCAGAAAGACAATCTGTTCTTCTGGATATGGAAACTGACAGCACACCTGATGTTAAGGTGACAAGGTCCCTAAGACCAAGGCGGTGTATTGACTATGGTCATCATGACAGTTACTGTGATGATGTATTTGATTCTGAGAGGGATGATCAACATTTCTCTTTGAAACCTGTTCTTCCCAAGGGGGTAATTCGCGGTTGTGCAGAGTGTAGTACTTGCCAAAAGGTAGTACCTGCAAGATGGCGTCCTGAAGAGTCTTGCAGACCAGATATTGAGGATGCTCCCATTTTCTATCCAACTGAAGAGGAGTTTGAAGATGCATTGCAATATATAGCTAGTATACGTGCAAAAGCTGAACCTTATGGGATCTGTCGCATCGTTCCTCCTTCTTCTTGGAAACCTCCCTGTCCTCTGCAAGAACAAATGAAGTGGACGAGTTCCAAATTTGCTACTCGTGTCCAGAGGATTGACAAACTTCAGAATCGAGATTCATTGAAAAAGCTATCGAGGCTTCATAACCAAATGAGGAGAAAAAGAAGAAGATATATTGATTCATCTTCTGGAATTAATTTAAAAGAGAATTACGAGCCATCTGTGGAGAATATTGAGGTGCTATATGGGGCTGATATTGAAACTGGAGTTTTTGGTAGTGGTTTTCCAAAAGTTTCAGGTCAAGTTTGTTCAACATCAGATGAAAAATATGTGAAATCTGGTTGGAACTTGAACAATTTTCCAAGGCTTCGAGGATCTCTTCTTTCCTATGAAAGCAGCAATATTTCAGGCATTTTGGTGCCGTGGTTGTATGTTGGGATGTGCTTTTCCTCCTTTTGCTGGCATGTTGAAGATCATCATCTATATTCATTGAATTTCTTGCATTGGGGTATGCCAAAAGTCACACAACTTTCCCCTTCCATATTAAAATCAGAGGGGGTTCCCGTATATAGGTGTATTCAAAAGCCTGGAGAGTTTGTTTTGACCTTCCCTCGAGCATACCATTCGGGATTCAACTGTGGTTTTGACGGTGCGGAGGCTGTTAATTTTGCACCAGTTGATTGGTTACCGCATGGTCAATTGGCCGTAGAGTTATACCATCAGCAGGAAAGAAGAACTACTATTTCCCATGATAAATTATTGCTTGGAGCTGCTAGAGAATCTGTAAAAGCACATTGGGAGCTTAATATACTCAAGAAAAGTACTTTGGACAATTTAAGATGGAAGGATGTCGGCGGGAGAGACGGGATTTTAGCAAAATCATTCAAGACACGCGTTGAAATGGAGTGTACGAGAAGGAATACCATATGCGGTTCTTCAAAGGCAGTGAAGATGGAGAGCAGCTTTGATGCCACTGACGAGAAGGAATGCAGTTTATGCTTTTTTGACTTGCACCTATACGCAGTTGGTTGTCATTGTTCCCCAGATAAATATGCTTGTTTGAATCATATGAAGCAGTTTTGCTCTTGTCCTCATGGTGCCAGAATTTTCCTCTTTCGATATGACATTAGTGAATTGAATATCCTTGTTGACGCGTTGGAAGGAAGACTAAGTGCAATTTATAGATGGGCTAGACTGGACCTTGGATTGGCTCTTGGTTCACATATCTCAAGAGAAAAGATTTGTAATAATAGATTGACAAGATCGTTTGAAGGAGCAGAACTTAAAGATTTGGCACTACGACAATCGATTGGTGAATTACTTATGCAGGTCCCAAAAACTTCAACTGAAATTGCTGATTTAGTGTCTAAATCTCTTGATTTGTTGAAGGAAATTGAGAAGATGAATAATGATTTTAATGTGAGGAAAGAAGAACATAATGGTACTGTTTCCCATTTGAGATCTACAAGTTGCCAGTCGCTTCAAAAAGACAGAGACCATTGTGGATTCAAGCTTTTTGATACTTTTGGGAAGTGTGTTTCAAAAGTTGTTTTTGGAAATAGAAAAACAATTGGAAATAAGATGTTTTCATTAATGTTATATTTTATTTTTTATGATTTTTTTTCAGGTTTCGATGGAGCAACGCCGGACGGAAGTGTTCATTCATGTCTCGCCGGCTCGAAGTGGGAACTTGTGAGAGAGAAGGTGAATCAAGAGATCTCTAAGCATCATGCCTTTGGAAAAAAGAAGCTTCCTCCATTGCAGCCTCCTAAAAGTTTAGATGGTTTTGAAATGTTCGGATTTACTTCACCGGCTATTGTGCAGGCCATTGAAGCAATGGATCCAAATCGAGTATGCACCGAGTATTGGGACTCACGGCCATGTTCTCGGCCTTCACAATCAGCGACCGTTAATAAATTTCAACAAATTGCATCAGAGAATAGAATCGGCCATCGGGTTGTGGGTGGAGCCGATACAATTCTCCGGCCACGGAGGTTGTTCAAGAAGGCAAATCAAGATGAATTGTACTCATTGCTTAGCATTTTGAGAGAAAAGAAGTAA 2448 40.36 MPSTSFSERQSVLLDMETDSTPDVKVTRSLRPRRCIDYGHHDSYCDDVFDSERDDQHFSLKPVLPKGVIRGCAECSTCQKVVPARWRPEESCRPDIEDAPIFYPTEEEFEDALQYIASIRAKAEPYGICRIVPPSSWKPPCPLQEQMKWTSSKFATRVQRIDKLQNRDSLKKLSRLHNQMRRKRRRYIDSSSGINLKENYEPSVENIEVLYGADIETGVFGSGFPKVSGQVCSTSDEKYVKSGWNLNNFPRLRGSLLSYESSNISGILVPWLYVGMCFSSFCWHVEDHHLYSLNFLHWGMPKVTQLSPSILKSEGVPVYRCIQKPGEFVLTFPRAYHSGFNCGFDGAEAVNFAPVDWLPHGQLAVELYHQQERRTTISHDKLLLGAARESVKAHWELNILKKSTLDNLRWKDVGGRDGILAKSFKTRVEMECTRRNTICGSSKAVKMESSFDATDEKECSLCFFDLHLYAVGCHCSPDKYACLNHMKQFCSCPHGARIFLFRYDISELNILVDALEGRLSAIYRWARLDLGLALGSHISREKICNNRLTRSFEGAELKDLALRQSIGELLMQVPKTSTEIADLVSKSLDLLKEIEKMNNDFNVRKEEHNGTVSHLRSTSCQSLQKDRDHCGFKLFDTFGKCVSKVVFGNRKTIGNKMFSLMLYFIFYDFFSGFDGATPDGSVHSCLAGSKWELVREKVNQEISKHHAFGKKKLPPLQPPKSLDGFEMFGFTSPAIVQAIEAMDPNRVCTEYWDSRPCSRPSQSATVNKFQQIASENRIGHRVVGGADTILRPRRLFKKANQDELYSLLSILREKK 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3878954 3886063 + BLOR03316 Blo11g00440 66640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00440 815 Pfam jmjN domain 100 133 IPR003349 -
Blo11g00440 815 ProSiteProfiles JmjN domain profile. 99 140 IPR003349 -
Blo11g00440 815 Pfam JmjC domain, hydroxylase 302 352 IPR003347 -
Blo11g00440 815 Gene3D Cupin 303 408 - -
Blo11g00440 815 PANTHER LYSINE-SPECIFIC DEMETHYLASE 303 550 - -
Blo11g00440 815 SUPERFAMILY Clavaminate synthase-like 239 396 - -
Blo11g00440 815 SMART JmjN_1 98 139 IPR003349 -
Blo11g00440 815 Gene3D Cupin 84 302 - -
Blo11g00440 815 Pfam F/Y rich C-terminus 688 751 IPR003889 GO:0005634
Blo11g00440 815 PANTHER JUMONJI 14-RELATED 203 303 - -
Blo11g00440 815 PANTHER JUMONJI 14-RELATED 689 813 - -
Blo11g00440 815 SMART cupin_9 238 369 IPR003347 -
Blo11g00440 815 PANTHER LYSINE-SPECIFIC DEMETHYLASE 39 189 - -
Blo11g00440 815 PANTHER LYSINE-SPECIFIC DEMETHYLASE 203 303 - -
Blo11g00440 815 PANTHER LYSINE-SPECIFIC DEMETHYLASE 689 813 - -
Blo11g00440 815 PANTHER JUMONJI 14-RELATED 39 189 - -
Blo11g00440 815 PANTHER JUMONJI 14-RELATED 303 550 - -
Blo11g00440 815 ProSiteProfiles JmjC domain profile. 238 369 IPR003347 -
Blo11g00440 815 SMART fyrc_3 666 762 IPR003889 GO:0005634
Blo11g00440 815 ProSiteProfiles FYR domain FYRC motif profile. 686 755 IPR003889 GO:0005634
Blo11g00440 815 Pfam C5HC2 zinc finger 459 509 IPR004198 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo10g00272 Blo11g00440 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00181 Blo-Chr11:1419284 Blo11g00440 Blo-Chr11:3878954 1.09E-09 dispersed
Blo11g00440 Blo-Chr11:3878954 Blo19g00246 Blo-Chr19:13243760 8.62E-47 dispersed
Blo10g00272 Blo-Chr10:3891155 Blo11g00440 Blo-Chr11:3878954 5.94E-42 wgd
Blo11g00440 Blo-Chr11:3878954 Blo05g00409 Blo-Chr5:5164814 4.10E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12909 PF05965 FYRC 4.10E-13 No_clan Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00440 - - jre:108997867 783.097