Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00448 | ATGGATTCCTCCATCTTATTCTTCCCTGGTTCTTCTTCTTTTTCCTCTTCGATGGACTCTTTCTCGAGGAAAACTAGCCTTAATTTGGAGAACAATCTGTTACCTTTCAATCAGAACGATTCCGAAGAAATGCTTCTTTACGGAGTTCTTAATGAGGCCGTCACCGATCGTTCTTCCGATTCTAATTTCTCATCCAATGTCTGGAAGGATCAGGGCGAGGTGAATTCGAAATCTACGAAAGATTCGGAGGTTTCTTACAGGGGAGTGAGGAGAAGGCCGTGGGGAAAATTCGCGGCGGAGATCAGAGATTCCACGAGAAACGGAGTTAGGGTTTGGTTGGGGACTTTCGACACGGCGGAGGCGGCGGCGCTGGCGTACGATCAAGCGGCGTTCGCGATGCGAGGCTCAATGGCGGTGCTTAATTTCCCGGCGCAAATGGTGGAGCAATCGCTGCGCGAGATGAATTACGGAGCGGAGGAGGGAAGTTCCCCTGTTCTGGCTCTGAAGAAGAGGCATTCAATGAAGAAAAAACCTAAAAATTCCAAGACGAAGAACAAGGAGAACGATTCAGTTTCGCAAAACGTTGTGGTGTTCGAAGATCTGGGGGCAGAGTACTTGGAAGAACTTCTGGGATTGGGCGAAGCTTCTTCTAATCCATGGTGA | 663 | 48.87 | MDSSILFFPGSSSFSSSMDSFSRKTSLNLENNLLPFNQNDSEEMLLYGVLNEAVTDRSSDSNFSSNVWKDQGEVNSKSTKDSEVSYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFAMRGSMAVLNFPAQMVEQSLREMNYGAEEGSSPVLALKKRHSMKKKPKNSKTKNKENDSVSQNVVVFEDLGAEYLEELLGLGEASSNPW | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3962976 | 3963638 | + | BLOR03324 | Blo11g00448 | 66648 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00448 | 220 | SMART | rav1_2 | 85 | 149 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00448 | 220 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B-LIKE | 7 | 212 | - | - | |
Blo11g00448 | 220 | Pfam | AP2 domain | 86 | 135 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00448 | 220 | CDD | AP2 | 86 | 145 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00448 | 220 | PANTHER | DNA-BINDING DOMAIN | 7 | 212 | IPR044808 | GO:0003700|GO:0009873 | |
Blo11g00448 | 220 | Gene3D | AP2/ERF domain | 85 | 145 | IPR036955 | GO:0003700|GO:0006355 | |
Blo11g00448 | 220 | ProSiteProfiles | AP2/ERF domain profile. | 85 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00448 | 220 | PRINTS | Ethylene responsive element binding protein signature | 86 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00448 | 220 | PRINTS | Ethylene responsive element binding protein signature | 109 | 125 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00448 | 220 | SUPERFAMILY | DNA-binding domain | 86 | 144 | IPR016177 | GO:0003677 | |
Blo11g00448 | 220 | MobiDBLite | consensus disorder prediction | 165 | 191 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo07g01031 | Blo-Chr7:30140539 | Blo11g00448 | Blo-Chr11:3962976 | 3.23E-62 | dispersed | |
Blo10g00644 | Blo-Chr10:20106488 | Blo11g00448 | Blo-Chr11:3962976 | 1.10E-55 | dispersed | |
Blo11g00448 | Blo-Chr11:3962976 | Blo02g01024 | Blo-Chr2:39681459 | 2.12E-33 | dispersed | |
Blo10g00321 | Blo-Chr10:4858049 | Blo11g00448 | Blo-Chr11:3962976 | 3.17E-85 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12911 | PF00847 | AP2 | 2.70E-15 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00448 | K14516 | - | qsu:112003251 | 212.616 |