Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00448 ATGGATTCCTCCATCTTATTCTTCCCTGGTTCTTCTTCTTTTTCCTCTTCGATGGACTCTTTCTCGAGGAAAACTAGCCTTAATTTGGAGAACAATCTGTTACCTTTCAATCAGAACGATTCCGAAGAAATGCTTCTTTACGGAGTTCTTAATGAGGCCGTCACCGATCGTTCTTCCGATTCTAATTTCTCATCCAATGTCTGGAAGGATCAGGGCGAGGTGAATTCGAAATCTACGAAAGATTCGGAGGTTTCTTACAGGGGAGTGAGGAGAAGGCCGTGGGGAAAATTCGCGGCGGAGATCAGAGATTCCACGAGAAACGGAGTTAGGGTTTGGTTGGGGACTTTCGACACGGCGGAGGCGGCGGCGCTGGCGTACGATCAAGCGGCGTTCGCGATGCGAGGCTCAATGGCGGTGCTTAATTTCCCGGCGCAAATGGTGGAGCAATCGCTGCGCGAGATGAATTACGGAGCGGAGGAGGGAAGTTCCCCTGTTCTGGCTCTGAAGAAGAGGCATTCAATGAAGAAAAAACCTAAAAATTCCAAGACGAAGAACAAGGAGAACGATTCAGTTTCGCAAAACGTTGTGGTGTTCGAAGATCTGGGGGCAGAGTACTTGGAAGAACTTCTGGGATTGGGCGAAGCTTCTTCTAATCCATGGTGA 663 48.87 MDSSILFFPGSSSFSSSMDSFSRKTSLNLENNLLPFNQNDSEEMLLYGVLNEAVTDRSSDSNFSSNVWKDQGEVNSKSTKDSEVSYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFAMRGSMAVLNFPAQMVEQSLREMNYGAEEGSSPVLALKKRHSMKKKPKNSKTKNKENDSVSQNVVVFEDLGAEYLEELLGLGEASSNPW 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3962976 3963638 + BLOR03324 Blo11g00448 66648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00448 220 SMART rav1_2 85 149 IPR001471 GO:0003700|GO:0006355
Blo11g00448 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B-LIKE 7 212 - -
Blo11g00448 220 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Blo11g00448 220 CDD AP2 86 145 IPR001471 GO:0003700|GO:0006355
Blo11g00448 220 PANTHER DNA-BINDING DOMAIN 7 212 IPR044808 GO:0003700|GO:0009873
Blo11g00448 220 Gene3D AP2/ERF domain 85 145 IPR036955 GO:0003700|GO:0006355
Blo11g00448 220 ProSiteProfiles AP2/ERF domain profile. 85 143 IPR001471 GO:0003700|GO:0006355
Blo11g00448 220 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Blo11g00448 220 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Blo11g00448 220 SUPERFAMILY DNA-binding domain 86 144 IPR016177 GO:0003677
Blo11g00448 220 MobiDBLite consensus disorder prediction 165 191 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01031 Blo-Chr7:30140539 Blo11g00448 Blo-Chr11:3962976 3.23E-62 dispersed
Blo10g00644 Blo-Chr10:20106488 Blo11g00448 Blo-Chr11:3962976 1.10E-55 dispersed
Blo11g00448 Blo-Chr11:3962976 Blo02g01024 Blo-Chr2:39681459 2.12E-33 dispersed
Blo10g00321 Blo-Chr10:4858049 Blo11g00448 Blo-Chr11:3962976 3.17E-85 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12911 PF00847 AP2 2.70E-15 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00448 K14516 - qsu:112003251 212.616