Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00456 ATGTCAAGCAATACCCATGTTTTGTTTTCCCTTTTCTGTCTGACCCTTTTGCTGAATGTGTTTAATGGTTTAGCCTCAGATGCAAAACCATTGCTTTTGGGGTGTGGCTCGACTGAAGAAGGCACCGATGAGGACGGACGAAAATGGGGGCCTGACTCGAAATTTATCAATTCAAGTAACTCAGTTTTGGTGAGCGCCCAATATCAAGACCCTTCCCTCACCTCTCAGATTCCATACATGGATGCAAGAATTTTCACCTCTGAAGCAACATACAATCTCCCAGTAGTGTCTGGTAAACGATATTGGCTCAGGCTCCATTTTTATCCTGCGGTTTATGGCTCTAACAATGCTGCAGAATCCTATTTCTCTGTGATGGCTAATGAGCTCACCCTGCTGAAAAATTTTAGTGTTCAATTGACATGTCAGGCGTTTACACAGGCTTATATTGTGAGAGAATATTCAATTGCACCGTTGAAATCTGATTCTTTGACACTTACTTTTAAGCCAGATGTGGGTTTTGCTTTTATCAATGGGATTGAGTTAATTCCAACGCCAGATCTTTTCGACAACGAAGCGGCGATGGTTGGTGTCTCCGATCAAACGGTGGATGTTAAGACCTCGAATTTACAGACCATGTTTAGGTTGAATGTTGGTGGGCAGTATATTTCTCCGACCAACGACTCGGGTCTCTACAGAATGTGGTATGATGACCTTCCTTACATCTATGGGGCTGCAACTGGAGTTACAAATGAAGCAAGCAAGAAAGTTAGAATCTTGTATAAAGATATGCCTCAATATGTGGCTCCTACTGATGTATATAAAACCTCAAGATCAATGGGCAATGACAAAAATGTCAATCAAGGCTACAATCTCACCTGGGTGTTTCAGCAAGTTGATCCAAATTTTATGTACCTTGTGAGGCTTCATTTCTGTGACTACTATCTGACCAAAGCCAATCAGATTGTCTTTGACATCTTCATCAACAATCAAACGGCCCAAGGCGAAGCCGATGTGATTGCTTGGAGTGGCGGAAAGGGGGTGCCCATCTACAAAGACTTTGCTGTGTATATGTCTAAAGATCAGCAACTTTGGCTGGCTATGCACCCATCTACCGCAACTGATCCTGAGTTCTTTGACGCAATGCTCAATGGAGTTGAGATATTCAAAGTCGACTCTAGTCAAAACTTGGCCGGCCCAAATCCAAGTCCTTCAGATTTTCAAGTTAAGGTGGAGGCTAAAACTCCGAAGGCTTTTGAAGAGAAACACAGCAGTAATGTCCATGTAATCGGCGGAGCAGCTGGAGGAGCTGCAGCAGTTGTGGTGGCCGCATTGTGCTTTGCTGTGTATCAAAAGAAGAACAAAGTTCCGGGTACTGATTCGCATACTTCTAGCTGGTTGCCAATTTATGGAAATTCGCATTCAAGTGGAAGCAAATCGACAATCTCGGGGAAGAGCACTGCCAGCAGTTTGGCTCAGGGTCTTGCTCGTCATTTCTCTTTGCCAGAAATTCTACAGGCTACAAAGCGTTTTGACGAGTCTAACGTCATCGGGGTCGGAGGATTTGGGAAAGTTTATAAGGGGGTTATCGACGGTGGAACAAAAGTTGCAATTAAGAGGTCGAATCCGTCTTCCGAGCAAGGAGTTCACGAGTTTCTGACTGAAATTGATTTGCTTTCAAAGCTGAGACACAAACACTTGGTGTCTTTGATCGGTTTCTGCGACGAAGATAACGAGATGTGCTTAGTTTATGACTATATGGGGCAGGGGACTCTAAGGGAGCATATTTACAAGACGAGCAAAGCCCGTCTTTCATGGAAGCAACGGCTCGAGATTTGCATCGGAGCGGCAAGAGGGCTGCACTACCTTCACACCGGAGCACAATACACAATCATTCACAGAGATGTGAAAACAACTAACATTCTCTTGGATGATAATTGGGTTGCTAAAGTTTCAGATTTTGGACTCTCGAAAACAGGTCCAAACATGGCAAACGGCCATGTCAGCACAGTAGTTAAAGGCAGCTTCGGCTACTTAGACCCTGAGTATTTCCGCAGGCAACAGTTGACCGAAAAATCCGATGTTTATTCCTTTGGAGTCGTCCTTTTTGAGGTCCTTTGTGCGAGGCCGGCTCTTAATCCAAGCCTTCCGAAAGAGCAAGTTAGTCTTGCAGATTGGGCGCTGCACTGCATAAGAAAAGGAACTCTCAAGGACATAATCGATCCCCATCTCAAGGGGAAGATCAGCCCAGAATGTCTGAAGAAATTTGCAGATGCCGCCGAGAAATGCTTGGACGATCACGGAGCTGAACGTCCCTCCATGGGCGATGTGCTGTGGAATCTTGAATTTGCACTTCAACTGCAGGAAAACGAAGATGGCTCGACTCGTTCATCTTCAAGGATTACCGATGCTGAATTCGAGGACGTGAATCTCGGAAGCCAGAACATGGCAAAGCACTACAATAATCTCAGCCTCGGATCCGAACATGAACTACCCGAAGAATCCAAAGACACCAGCAGCGCCGGAATATTCTCGCAGATTGCGGACGTAGAGACTGATGTTGCGGTAGCTGGACAACCGAAGAAGAGGACATTTAAGAAGTTCAGCTTTAGAGGCGTAGATTTGGATGCGCTGCTTGATATGTCTACGGATGAGCTCGTAAAGCTCTTCACTGCCAGAGCTCGGAGAAGGTTTCAGAGAGGTTTGAAGCGAAAGCCAATGGCATTGATTAAGAAACTACGAAAAGCTAAAAGAGAAGCCCCACCTGGTGAAAAGCCGGAGCCAGTGAGAACCCACCTGCGAAACATGATAATCGTCCCTGAGATGATTGGGAGCATTATTGGGGTTTACAATGGAAAGACCTTCAATCAGGTTGAGATAAAGCCTGAAATGATTGGCCACTACCTTGCTGAATTCTCCATTTCCTATAAGCCTGTGAAGCATGGAAGACCTGGTATTGGTGCCACCCACTCTTCCAGGTTCATTCCTCTCAAGTGA 2994 45.39 MSSNTHVLFSLFCLTLLLNVFNGLASDAKPLLLGCGSTEEGTDEDGRKWGPDSKFINSSNSVLVSAQYQDPSLTSQIPYMDARIFTSEATYNLPVVSGKRYWLRLHFYPAVYGSNNAAESYFSVMANELTLLKNFSVQLTCQAFTQAYIVREYSIAPLKSDSLTLTFKPDVGFAFINGIELIPTPDLFDNEAAMVGVSDQTVDVKTSNLQTMFRLNVGGQYISPTNDSGLYRMWYDDLPYIYGAATGVTNEASKKVRILYKDMPQYVAPTDVYKTSRSMGNDKNVNQGYNLTWVFQQVDPNFMYLVRLHFCDYYLTKANQIVFDIFINNQTAQGEADVIAWSGGKGVPIYKDFAVYMSKDQQLWLAMHPSTATDPEFFDAMLNGVEIFKVDSSQNLAGPNPSPSDFQVKVEAKTPKAFEEKHSSNVHVIGGAAGGAAAVVVAALCFAVYQKKNKVPGTDSHTSSWLPIYGNSHSSGSKSTISGKSTASSLAQGLARHFSLPEILQATKRFDESNVIGVGGFGKVYKGVIDGGTKVAIKRSNPSSEQGVHEFLTEIDLLSKLRHKHLVSLIGFCDEDNEMCLVYDYMGQGTLREHIYKTSKARLSWKQRLEICIGAARGLHYLHTGAQYTIIHRDVKTTNILLDDNWVAKVSDFGLSKTGPNMANGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLPKEQVSLADWALHCIRKGTLKDIIDPHLKGKISPECLKKFADAAEKCLDDHGAERPSMGDVLWNLEFALQLQENEDGSTRSSSRITDAEFEDVNLGSQNMAKHYNNLSLGSEHELPEESKDTSSAGIFSQIADVETDVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 997
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4039775 4044645 - BLOR03332 Blo11g00456 66656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00456 997 SUPERFAMILY Ribosomal protein S19 901 981 IPR023575 GO:0003735|GO:0005840|GO:0006412
Blo11g00456 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Blo11g00456 997 Gene3D 30s Ribosomal Protein S19; Chain A 854 997 IPR023575 GO:0003735|GO:0005840|GO:0006412
Blo11g00456 997 Hamap 30S ribosomal protein S19 [rpsS]. 893 986 IPR002222 GO:0003735|GO:0005840|GO:0006412
Blo11g00456 997 ProSiteProfiles Protein kinase domain profile. 510 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00456 997 ProSitePatterns TonB-dependent receptor proteins signature 1. 1 67 IPR010916 -
Blo11g00456 997 Gene3D Phosphorylase Kinase; domain 1 471 585 - -
Blo11g00456 997 SMART serkin_6 510 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00456 997 Gene3D - 208 392 - -
Blo11g00456 997 Gene3D - 31 184 - -
Blo11g00456 997 Gene3D Transferase(Phosphotransferase) domain 1 586 806 - -
Blo11g00456 997 SUPERFAMILY Protein kinase-like (PK-like) 496 779 IPR011009 -
Blo11g00456 997 PANTHER OS07G0166700 PROTEIN 20 835 IPR045272 GO:0004714|GO:0006468
Blo11g00456 997 CDD STKc_IRAK 516 781 - -
Blo11g00456 997 ProSitePatterns Ribosomal protein S19 signature. 950 974 IPR020934 GO:0003723
Blo11g00456 997 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Blo11g00456 997 Pfam Protein tyrosine and serine/threonine kinase 514 777 IPR001245 GO:0004672|GO:0006468
Blo11g00456 997 Pfam Malectin-like domain 34 390 IPR024788 -
Blo11g00456 997 PANTHER RECEPTOR-LIKE PROTEIN KINASE ANXUR2 20 835 - -
Blo11g00456 997 TIGRFAM uS19_arch: ribosomal protein uS19 864 997 IPR005713 GO:0003735|GO:0006412|GO:0015935
Blo11g00456 997 Pfam Ribosomal protein S19 895 980 IPR002222 GO:0003735|GO:0005840|GO:0006412
Blo11g00456 997 PRINTS Ribosomal protein S19 family signature 950 962 IPR002222 GO:0003735|GO:0005840|GO:0006412
Blo11g00456 997 PRINTS Ribosomal protein S19 family signature 962 977 IPR002222 GO:0003735|GO:0005840|GO:0006412
Blo11g00456 997 PRINTS Ribosomal protein S19 family signature 930 949 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00019 Blo-Chr2:103955 Blo11g00456 Blo-Chr11:4039775 2.84E-07 dispersed
Blo02g00028 Blo-Chr2:131261 Blo11g00456 Blo-Chr11:4039775 2.84E-07 dispersed
Blo02g00606 Blo-Chr2:11841889 Blo11g00456 Blo-Chr11:4039775 1.56E-99 dispersed
Blo07g00244 Blo-Chr7:3023128 Blo11g00456 Blo-Chr11:4039775 5.95E-102 dispersed
Blo11g00456 Blo-Chr11:4039775 Blo12g00079 Blo-Chr12:5419271 0 dispersed
Blo10g00314 Blo-Chr10:4751932 Blo11g00456 Blo-Chr11:4039775 2.91E-104 transposed
Blo10g00313 Blo-Chr10:4747907 Blo11g00456 Blo-Chr11:4039775 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84536 PF12819 Malectin_like 3.40E-41 CL0202 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00456 - - csv:101219475 1195.65