Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00470 ATGGCTTCCCAGCAGGGCGATCCCGTCTTCCCCGACGAGGACCTCGACGATGAGGAGGACTCTATGGACGAGGACGAGGACGAAGACGACGACGACGAAGAGCTGAACGGTGATGTTTTGGTCGATGACGATGTCAATTCCGCCTCTCCTTCTACTTCCTTCGGCGGTGCGGTTGTTGTTCCTGATGCTTCGGTTTCTGTAGCTGTCGCCGGTTCGGTTTTAGGTCATTCTGTGCCTAACGGTGATCCTCCGGTTTCCACCGTCTCCGTCGTCAATGTTTCTAGCTCTAATTCGCAGCGGCAGCGATTTGAGAGTACGGTTACCGAGCCGTTGATTGTGCAGGAGGAGAAGAAACCGATAGATGAGGCTCGGAGGCTGTTTCAGAGACTGTGGACGGATGAGGATGAGATCGGTCTCCTGCAAGGATTTCTTGATTATACCGTGAATCGAGGTTCTACTCATCATCATCAATATGATACCGCTTTGTTCTACGACCAGATCAAGTCGAAGCTTCAGTTGGATTTCAACAAAAATCAGCTGGTGGAGAAGCTCCGTAGGTTGAAGAAGAAGTACCGTAACGTCATGGAAAAGATTAATTCAGGAAAAGAATTCAATTTTAAAAGCCCTCACGATCAAGCCACCTTTGAGATCTCCCACAAGATCTGGAGCAACATCGTTCGAACAGGTGTAGATGATAACGCTCTAGACGATGATGATCCAAATCCTATTTCCAATCATTTCGAAATCAAAGATGAGGAATTTGCGGGGAATAGTGGAGAGAAAAGGACTTCGACCGCATCAAGATCAGGGAAACGTTCAAGATGCAAAGCTGGATTGCAAACTATCGATACACGCCCATCTTATGAGACTCTGAACAAGGATAAAAATAGTTGTCATAATAGCAATATGAGTAACATGACTGGGTTGATTGAAGAGACTGTGAGGAGTTGCTTATCGCCTTTGTTTAAGGAGTTGTTGAATAATGCGGTGGGCGGCACTTGTGGGGCAAGAGGTTTAGGTGGATTGGCATTGAATGCAATGCCATTGAGCTTTGGTGGGTCGTTCAAGAATGGAGGGGAAATCACAGACGAGAGATGGAGAAAACAGCAGATACTAGAGCTGGAGGTTTTTTCGAAGCGCCTGGAGTTAGTACAGGATCAAATTAAGACTACATTGGAAGAGTTGCGGTTGATGGATGGAGATGCAAAAAGGCGATAA 1218 46.8 MASQQGDPVFPDEDLDDEEDSMDEDEDEDDDDEELNGDVLVDDDVNSASPSTSFGGAVVVPDASVSVAVAGSVLGHSVPNGDPPVSTVSVVNVSSSNSQRQRFESTVTEPLIVQEEKKPIDEARRLFQRLWTDEDEIGLLQGFLDYTVNRGSTHHHQYDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVMEKINSGKEFNFKSPHDQATFEISHKIWSNIVRTGVDDNALDDDDPNPISNHFEIKDEEFAGNSGEKRTSTASRSGKRSRCKAGLQTIDTRPSYETLNKDKNSCHNSNMSNMTGLIEETVRSCLSPLFKELLNNAVGGTCGARGLGGLALNAMPLSFGGSFKNGGEITDERWRKQQILELEVFSKRLELVQDQIKTTLEELRLMDGDAKRR 405
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 4224039 4225256 + BLOR03346 Blo11g00470 66670
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00470 405 PANTHER BNAANNG10740D PROTEIN-RELATED 1 399 IPR007592 GO:0006355
Blo11g00470 405 MobiDBLite consensus disorder prediction 1 57 - -
Blo11g00470 405 MobiDBLite consensus disorder prediction 252 277 - -
Blo11g00470 405 Pfam Protein of unknown function, DUF573 127 223 IPR007592 GO:0006355
Blo11g00470 405 Coils Coil 177 197 - -
Blo11g00470 405 MobiDBLite consensus disorder prediction 10 40 - -
Blo11g00470 405 PANTHER BNAANNG10740D PROTEIN 1 399 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00328 Blo-Chr10:4940128 Blo11g00470 Blo-Chr11:4224039 1.11E-46 dispersed
Blo10g00330 Blo-Chr10:4946993 Blo11g00470 Blo-Chr11:4224039 0 dispersed
Blo11g00470 Blo-Chr11:4224039 Blo04g00674 Blo-Chr4:6044162 3.21E-12 dispersed
Blo01g00818 Blo-Chr1:12811213 Blo11g00470 Blo-Chr11:4224039 5.34E-26 transposed
Blo11g00470 Blo-Chr11:4224039 Blo17g00596 Blo-Chr17:11656196 1.02E-134 wgd
Blo11g00470 Blo-Chr11:4224039 Blo18g00580 Blo-Chr18:8533054 1.52E-110 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12916 PF04504 DUF573 2.10E-33 CL0123 Blo TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00470 - - cmax:111495335 386.726