Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo11g00470 | ATGGCTTCCCAGCAGGGCGATCCCGTCTTCCCCGACGAGGACCTCGACGATGAGGAGGACTCTATGGACGAGGACGAGGACGAAGACGACGACGACGAAGAGCTGAACGGTGATGTTTTGGTCGATGACGATGTCAATTCCGCCTCTCCTTCTACTTCCTTCGGCGGTGCGGTTGTTGTTCCTGATGCTTCGGTTTCTGTAGCTGTCGCCGGTTCGGTTTTAGGTCATTCTGTGCCTAACGGTGATCCTCCGGTTTCCACCGTCTCCGTCGTCAATGTTTCTAGCTCTAATTCGCAGCGGCAGCGATTTGAGAGTACGGTTACCGAGCCGTTGATTGTGCAGGAGGAGAAGAAACCGATAGATGAGGCTCGGAGGCTGTTTCAGAGACTGTGGACGGATGAGGATGAGATCGGTCTCCTGCAAGGATTTCTTGATTATACCGTGAATCGAGGTTCTACTCATCATCATCAATATGATACCGCTTTGTTCTACGACCAGATCAAGTCGAAGCTTCAGTTGGATTTCAACAAAAATCAGCTGGTGGAGAAGCTCCGTAGGTTGAAGAAGAAGTACCGTAACGTCATGGAAAAGATTAATTCAGGAAAAGAATTCAATTTTAAAAGCCCTCACGATCAAGCCACCTTTGAGATCTCCCACAAGATCTGGAGCAACATCGTTCGAACAGGTGTAGATGATAACGCTCTAGACGATGATGATCCAAATCCTATTTCCAATCATTTCGAAATCAAAGATGAGGAATTTGCGGGGAATAGTGGAGAGAAAAGGACTTCGACCGCATCAAGATCAGGGAAACGTTCAAGATGCAAAGCTGGATTGCAAACTATCGATACACGCCCATCTTATGAGACTCTGAACAAGGATAAAAATAGTTGTCATAATAGCAATATGAGTAACATGACTGGGTTGATTGAAGAGACTGTGAGGAGTTGCTTATCGCCTTTGTTTAAGGAGTTGTTGAATAATGCGGTGGGCGGCACTTGTGGGGCAAGAGGTTTAGGTGGATTGGCATTGAATGCAATGCCATTGAGCTTTGGTGGGTCGTTCAAGAATGGAGGGGAAATCACAGACGAGAGATGGAGAAAACAGCAGATACTAGAGCTGGAGGTTTTTTCGAAGCGCCTGGAGTTAGTACAGGATCAAATTAAGACTACATTGGAAGAGTTGCGGTTGATGGATGGAGATGCAAAAAGGCGATAA | 1218 | 46.8 | MASQQGDPVFPDEDLDDEEDSMDEDEDEDDDDEELNGDVLVDDDVNSASPSTSFGGAVVVPDASVSVAVAGSVLGHSVPNGDPPVSTVSVVNVSSSNSQRQRFESTVTEPLIVQEEKKPIDEARRLFQRLWTDEDEIGLLQGFLDYTVNRGSTHHHQYDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVMEKINSGKEFNFKSPHDQATFEISHKIWSNIVRTGVDDNALDDDDPNPISNHFEIKDEEFAGNSGEKRTSTASRSGKRSRCKAGLQTIDTRPSYETLNKDKNSCHNSNMSNMTGLIEETVRSCLSPLFKELLNNAVGGTCGARGLGGLALNAMPLSFGGSFKNGGEITDERWRKQQILELEVFSKRLELVQDQIKTTLEELRLMDGDAKRR | 405 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 4224039 | 4225256 | + | BLOR03346 | Blo11g00470 | 66670 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo11g00470 | 405 | PANTHER | BNAANNG10740D PROTEIN-RELATED | 1 | 399 | IPR007592 | GO:0006355 | |
| Blo11g00470 | 405 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
| Blo11g00470 | 405 | MobiDBLite | consensus disorder prediction | 252 | 277 | - | - | |
| Blo11g00470 | 405 | Pfam | Protein of unknown function, DUF573 | 127 | 223 | IPR007592 | GO:0006355 | |
| Blo11g00470 | 405 | Coils | Coil | 177 | 197 | - | - | |
| Blo11g00470 | 405 | MobiDBLite | consensus disorder prediction | 10 | 40 | - | - | |
| Blo11g00470 | 405 | PANTHER | BNAANNG10740D PROTEIN | 1 | 399 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo10g00328 | Blo-Chr10:4940128 | Blo11g00470 | Blo-Chr11:4224039 | 1.11E-46 | dispersed | |
| Blo10g00330 | Blo-Chr10:4946993 | Blo11g00470 | Blo-Chr11:4224039 | 0 | dispersed | |
| Blo11g00470 | Blo-Chr11:4224039 | Blo04g00674 | Blo-Chr4:6044162 | 3.21E-12 | dispersed | |
| Blo01g00818 | Blo-Chr1:12811213 | Blo11g00470 | Blo-Chr11:4224039 | 5.34E-26 | transposed | |
| Blo11g00470 | Blo-Chr11:4224039 | Blo17g00596 | Blo-Chr17:11656196 | 1.02E-134 | wgd | |
| Blo11g00470 | Blo-Chr11:4224039 | Blo18g00580 | Blo-Chr18:8533054 | 1.52E-110 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 12916 | PF04504 | DUF573 | 2.10E-33 | CL0123 | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo11g00470 | - | - | cmax:111495335 | 386.726 |