Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00475 ATGGGTGCACCGAAAAAAGTTGGGTCGAGGATTTCTGACGAATCTGAGGAGTTGGCTCGTGTTTCCTTGCAGGCCGTTCTTCTTGCTGATAGCTTTGCCACCAAGTTTCAGCCCATAACTCTCGAACGGCCTAAGGTATTACTTCCGCTAGTGAATGTCCCAATGATTAATTATACCTTAGCATGGCTTGAATCTGCGGGCGTTGAAGAAGTTTTTGTATTTTGCTGTGCTCATTCAAGGCAAGTAATTGATTATTTGGAGAATTCTGAATGGTTCTCTCAACCAGAGTTCTCGGTCACAACAATAGAATCGCACAATTCTGTGAGTGCTGGAGATGCTCTGCGCTTAATCTATGAAAAGAATGTGATACATGGAGACTTCATCCTTATCACAGGAGATACAATAAGCAACATGTCACTTTCACAAGCTCTTCAGGAACACAAGGAAAGAAAGAAAAGAGATAGCAATGCAGTAATGACCATGATTATCAAACAATCGAAGCCCTCTCCTATCACTCACCAATCTCGTCTTGGTACTGATGAGCTGTTTATAGCAATAGATCCTGACACTAAGCAATTACTATATTATGAGGATAGAGCGGACCAATCAAAAGGGGCCATATATCTTGACAAGCTATTACTCATGGATAATCCTTTAATTTCCCTTCACAATGAAAAACAGGATTGCTATATAGATATTTGTTCTCCAGAAGTCCTCAGTCTTTTCACAGATAATTTTGACTATCAACATCTTCGACGCCATTTTGTCAAAGGATTGCTTGTTGATGATATCATGGGTTACAAGATCTTTACACATGATATTCACTCGAGCTATGCAGCTAGGATTGATAATTTTCGAAGCTATGATGCTATTAGCAAGGACATTATACAGAGGTGGTCATATCCATTTGTTCCTGATGTTAAATTCTTTGGAAATTCCACGACTAAACTTGAAAGACAGGGGATGTATAGAGCTTCAGATATTAGGCAAGCTCGTTCTGCTCAAATAGGTCCTTCTACTGTTATTGGAAAGAATACTGAAATCGGGTGCAACACCAAAATTTCAAATTCAGTTGTTGGACAAGGGTGTAAAATTGGATCAAACGTCTTGATAGAAGGTTCTTACATATGGGATAATGTTACTATCGAAGACAGCTGTAAACTAAGGCATGCAATTGTTTGCGATGGAGTAACACTGAGATTGGGAGCAGAACTAGAACCTGGTGTAGTTTTGTCTTTCAATTTTCATTTTCTGGGAGTGTTGGGGCGCTTCTATACCTATCTCATGGTTGCATTGACTGTAAAGCTTAAATTGCTCAGTTCTTGCCAGTCTAACATTCAGCTTGTTGTTATAGGTCAACAATTTGTTGTCCCTGCATATTCAAAGGTGTCGTTGTTTCAGCAACCAACCAAGCAAGATAGTGATGAGGAGCTGGAATATGCTGATAGTAGCAGTGAAATCCTAGGTACAACGGACATGTATGATGGGGAATCGACTTCCCAGACACATGAGCTTGGTACTGGTGGTGTTGGACATATATGGTCAGATTTTGAAGGAAACATTGAGGAAAGGTGGAGGCACTCAGTTGCACCCATTCCTGCGGATAAAGTTGCTGAGGCAATGCAAGCCAGAGATGATGACTTTGAGTTGTCAGCTCAAGATGGAGGCCTTCTTCCTCTTTCAGGAGAGTTGAAACCCGGATCCAATGATTCTGAAGATGATGATAATGAAGATTCCAAGGACGACTCCACTTACTTTGAAAAGGAGGTTGAAGCAACTTTCTTAAGGGCTGTGCATGAAAATATTAAAGTAGACAACGTAATTTTGGAAGTGAACTCATTACGATTATCATATAATAAAGAAGCTGCGGATTGCGCTGGGGCAATATTTTTTTCATTAATAAAATATTCCCTAGAAACACCACATAGTTCTGCTAATGAATTGTTGCAAAATGCTACAAGTACTATTACCAAATGGAAAAAGCTTCTCAAGTCTTACCTTACTGACTTGGATGAGGAGATGGAAGTAATTTTGAAATTTGAAGAGATGTGTGTGGAATCTGCCAAGGAATTTAGTCCATACTTTGCCAAGCTGTTGTGTCATTTGTACGACCAAGAAATAATTCAAGAGGAGGCCATTTTACGGTGGGCAGACGAGAAAAAGGACGCAGAGGAGTCGGATACAATTTTCGTCAAGCAATCAGAGAAATTTATAGAATGGTTGAGAGTGGCATCGGAGGAAGAAGAAGAAGAAGAAGAAGATCAATGA 2268 39.99 MGAPKKVGSRISDESEELARVSLQAVLLADSFATKFQPITLERPKVLLPLVNVPMINYTLAWLESAGVEEVFVFCCAHSRQVIDYLENSEWFSQPEFSVTTIESHNSVSAGDALRLIYEKNVIHGDFILITGDTISNMSLSQALQEHKERKKRDSNAVMTMIIKQSKPSPITHQSRLGTDELFIAIDPDTKQLLYYEDRADQSKGAIYLDKLLLMDNPLISLHNEKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHDIHSSYAARIDNFRSYDAISKDIIQRWSYPFVPDVKFFGNSTTKLERQGMYRASDIRQARSAQIGPSTVIGKNTEIGCNTKISNSVVGQGCKIGSNVLIEGSYIWDNVTIEDSCKLRHAIVCDGVTLRLGAELEPGVVLSFNFHFLGVLGRFYTYLMVALTVKLKLLSSCQSNIQLVVIGQQFVVPAYSKVSLFQQPTKQDSDEELEYADSSSEILGTTDMYDGESTSQTHELGTGGVGHIWSDFEGNIEERWRHSVAPIPADKVAEAMQARDDDFELSAQDGGLLPLSGELKPGSNDSEDDDNEDSKDDSTYFEKEVEATFLRAVHENIKVDNVILEVNSLRLSYNKEAADCAGAIFFSLIKYSLETPHSSANELLQNATSTITKWKKLLKSYLTDLDEEMEVILKFEEMCVESAKEFSPYFAKLLCHLYDQEIIQEEAILRWADEKKDAEESDTIFVKQSEKFIEWLRVASEEEEEEEEDQ 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4309036 4317337 - BLOR03351 Blo11g00475 66675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00475 755 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Blo11g00475 755 SMART 542_3 660 747 IPR003307 GO:0005515
Blo11g00475 755 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 10 305 IPR029044 -
Blo11g00475 755 MobiDBLite consensus disorder prediction 555 583 - -
Blo11g00475 755 PANTHER - 8 415 - -
Blo11g00475 755 Gene3D - 573 753 - -
Blo11g00475 755 SUPERFAMILY Trimeric LpxA-like enzymes 268 411 IPR011004 -
Blo11g00475 755 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 8 415 - -
Blo11g00475 755 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 449 753 - -
Blo11g00475 755 PANTHER - 449 753 - -
Blo11g00475 755 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
Blo11g00475 755 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058|GO:0016779
Blo11g00475 755 Gene3D Hexapeptide repeat proteins 318 414 - -
Blo11g00475 755 CDD LbH_eIF2B_epsilon 341 414 - -
Blo11g00475 755 CDD W2_eIF2B_epsilon 586 745 IPR044123 GO:0005085|GO:0031369
Blo11g00475 755 Pfam eIF4-gamma/eIF5/eIF2-epsilon 672 751 IPR003307 GO:0005515
Blo11g00475 755 SUPERFAMILY ARM repeat 586 742 IPR016024 -
Blo11g00475 755 ProSiteProfiles W2 domain profile. 580 751 IPR003307 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00931 Blo-Chr3:35305189 Blo11g00475 Blo-Chr11:4309036 2.05E-17 dispersed
Blo10g00254 Blo-Chr10:3598416 Blo11g00475 Blo-Chr11:4309036 7.30E-07 dispersed
Blo11g00409 Blo-Chr11:3556097 Blo11g00475 Blo-Chr11:4309036 4.14E-07 dispersed
Blo11g00475 Blo-Chr11:4309036 Blo16g00264 Blo-Chr16:6198422 2.08E-07 dispersed
Blo11g00475 Blo-Chr11:4309036 Blo03g01519 Blo-Chr3:42078854 5.07E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00475 K03240 - zju:107419573 1102.81