Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00489 ATGAGTGTCAGCCACAAGCCAGAAGACGGAAGAAAGGAAGTCGACGGAAGACAGAATTACAAACCGAGCTGGCGACTGGCAAGCTCTCAGTCGACGGAAGGAAGTCGAAACTCGGAAGACGCCTGGAAGACGGAAGACGTCAAGAGGAACGCCTGGAACGCCGTTCGGGTGGGGGATCGGGAGTCGGGAGACTCAAGTCTCGGGAGTCGGGAGGTCGGAGGGGAGAGCTCGGGACTGGAGTCGGATGTCGCCTGTGTGTCTACTGTACATATAGACGCACAGGGAGGTAGAGTGGAAGTAACAGGGAATTTCGACCCTCAAAATCTCACAAAAAAGCTTGAAAAATCAGGGAAATGTTCAGAGATGATGGAGGCTCAGAAAAGTTCAAAAAGTATTAAGAGCGCCGCCCAGTCTGAGAGGAGTCAGAGTGGAAAAAGCAAAGCGGGGGGAAGTTATAAATCTCAAAATAGTTTGAAGAGTGGAGGAGAAGCACATTCTCATAAAGGGTCTAAGGCTCTGACTTCTGCTTCAATGGAGAACAAAAGTGTCAAAAAGTTTGACTTGACTGATTTGGAAAGTAAGAGAAGTGGTAAAAGCAGAGGAAGTGAATTTGGCGGGGGTAAAAATGGGCGAAACGGAGGGCTTTTTGGTTTTGGAAAGTTTTTTGGTTTTGGAAAGCTTTTTGGTTTTGGTAAAAATGGGGGAGAAAAGGGACCTAAACCTTCTTCCAGGAAGAGTCACAGTGAAAGAGGAGGAAAAACACTCCATGGAGGATCGATCAAAAAGGGTTCATCAAGAAAAGATGAACCCTTACCGTTCCATCCACCGGCAAGTGATTTTCATGGTTCTGAGGTCGCACACTCCTCCGCCGGGAACAGCTCCGTCGGCCGTAGCAGTAGAGGTGGAAGTAAAAAGTCAAGTAAGAAGAGCCAAATGAGCCATCACAGTGGAGAGAAGGCAAGCCAAGTGGATGATATTTCATTGGTTCAAGATCATGAACACTCCATCGCCAGGAACAGCTCCGTCGGCCGGAGCAGTAGAGGTGGAAGTAAAAAGGGGAGTAAGAGGAGTCCGATGAGTCATCACAGTGGAGAGAAGAGAAGTCAAATGGGCGATCCTTACAATCAACAAGATTTGCATATGACGATGATGATGAACCAAAGAAGGTATTACGATGCGCCACATCGGCCAACGTCGCCGCCGGCAGCGCATCGGGAATCTTACGAACACTATTTCAGCGATGAGAATGCAAATGCGTGTCAGCATAACTATGAACATATCAGCAGATTTGAAATCATTATTTACCTGGAACACAAAGCAGAATCTGCTGAACTTATTATGGATCCTCAAGGACCAAGCCAACCTCCGTCGATGGGGGTGGTCGGGGGTGGGCTTCAATTTCCATATGGTTCGAGTTTTTATGAGCCGAACCAGATCGCCGGAACTCAAAGTGCAGGGCCGATGATTGGAGCCGTTCAATCCACAAGCCAGCCTGGGGGACCCCAGCTAGCGTATCAGCAGATGCACCAACAACTCCTGCAGCAGCTCCAGAACTTCTGGGAGAATCAGAGCCGTGAAATCGAAAAGGTGACCGATTTCAAGAACCATAGCCTCCCATTGGCCAGGATCAAGAAGATCATGAAGGCGGACGAAGATGTTCGGATGATCTCAGCCGAGGCCCCCGTCGTGTTTGCCAGGGCATGTGAAATGTTCATCTTGGAACTGACCCTCCGATCATGGAATCACACGGAGGAGAATAAACGCAGGACGCTCCAGAAGAACGACATTGCAGCTGCAATCACAAGAACTGATATCTTTGACTTTTTGGTCGACATTGTCCCGAGGGACGATCCGAAAGACGAAGTGCTCGCCTCTTTCCCTCGGGGAGCCATGCCAGTTGGGGCCCCAGTCGATGGGATCCCATACGACCACATGCCGCCTCAGCATCCAGGGATGATGGCAGGGATGTATGCCCCTCCACCTCACACCTACATGGTCCCGCAAATGTGGCCCCACGTACCTGATCAACATCAATCGAGTTCCGATCAGTAG 2052 49.85 MSVSHKPEDGRKEVDGRQNYKPSWRLASSQSTEGSRNSEDAWKTEDVKRNAWNAVRVGDRESGDSSLGSREVGGESSGLESDVACVSTVHIDAQGGRVEVTGNFDPQNLTKKLEKSGKCSEMMEAQKSSKSIKSAAQSERSQSGKSKAGGSYKSQNSLKSGGEAHSHKGSKALTSASMENKSVKKFDLTDLESKRSGKSRGSEFGGGKNGRNGGLFGFGKFFGFGKLFGFGKNGGEKGPKPSSRKSHSERGGKTLHGGSIKKGSSRKDEPLPFHPPASDFHGSEVAHSSAGNSSVGRSSRGGSKKSSKKSQMSHHSGEKASQVDDISLVQDHEHSIARNSSVGRSSRGGSKKGSKRSPMSHHSGEKRSQMGDPYNQQDLHMTMMMNQRRYYDAPHRPTSPPAAHRESYEHYFSDENANACQHNYEHISRFEIIIYLEHKAESAELIMDPQGPSQPPSMGVVGGGLQFPYGSSFYEPNQIAGTQSAGPMIGAVQSTSQPGGPQLAYQQMHQQLLQQLQNFWENQSREIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDPKDEVLASFPRGAMPVGAPVDGIPYDHMPPQHPGMMAGMYAPPPHTYMVPQMWPHVPDQHQSSSDQ 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4507897 4520959 + BLOR03365 Blo11g00489 66689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00489 683 MobiDBLite consensus disorder prediction 94 212 - -
Blo11g00489 683 MobiDBLite consensus disorder prediction 22 37 - -
Blo11g00489 683 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 447 683 - -
Blo11g00489 683 MobiDBLite consensus disorder prediction 238 274 - -
Blo11g00489 683 MobiDBLite consensus disorder prediction 38 55 - -
Blo11g00489 683 MobiDBLite consensus disorder prediction 285 301 - -
Blo11g00489 683 MobiDBLite consensus disorder prediction 230 374 - -
Blo11g00489 683 Gene3D - 73 127 - -
Blo11g00489 683 MobiDBLite consensus disorder prediction 1 82 - -
Blo11g00489 683 Gene3D Histone, subunit A 502 615 IPR009072 GO:0046982
Blo11g00489 683 MobiDBLite consensus disorder prediction 1 19 - -
Blo11g00489 683 MobiDBLite consensus disorder prediction 333 348 - -
Blo11g00489 683 MobiDBLite consensus disorder prediction 311 332 - -
Blo11g00489 683 SUPERFAMILY Histone-fold 515 609 IPR009072 GO:0046982
Blo11g00489 683 MobiDBLite consensus disorder prediction 183 201 - -
Blo11g00489 683 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 447 683 - -
Blo11g00489 683 MobiDBLite consensus disorder prediction 122 163 - -
Blo11g00489 683 Pfam Core histone H2A/H2B/H3/H4 519 600 IPR007125 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00358 Blo-Chr1:4246554 Blo11g00489 Blo-Chr11:4507897 3.18E-06 dispersed
Blo02g00974 Blo-Chr2:37752041 Blo11g00489 Blo-Chr11:4507897 7.35E-23 dispersed
Blo02g01102 Blo-Chr2:41983933 Blo11g00489 Blo-Chr11:4507897 1.22E-29 dispersed
Blo04g01166 Blo-Chr4:20154829 Blo11g00489 Blo-Chr11:4507897 1.49E-56 dispersed
Blo11g00489 Blo-Chr11:4507897 Blo13g00597 Blo-Chr13:28401234 1.04E-63 dispersed
Blo11g00489 Blo-Chr11:4507897 Blo04g00467 Blo-Chr4:3880174 5.28E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12917 PF00808 CBFD_NFYB_HMF 2.00E-17 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00489 K08066 - qsu:111987198 313.923