Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00503 ATGCTGCATAACTTGGTGGAATCTCTTACTGGTTCTTTAGGCCATGAAGATGGTGGGAAGAAGATTAAAGGGACTGTGGTTTTGATGAAGAAGAATGTGTTGGAGTTGAATGATTTTGTTGCTTCTGTTCAGGATAGACTTGAAGATCTTTTTGGTCAGAAAGTTTCTCTGCAACTCATTAGTGCCGTCAATGGCGACCCTGCAAATGGGTTGAGAGGAAAAGTGGGAAAGGCATCGAATTTGGAAGACTGGGCGACGAGCAAACCTCGTCTGAAAACCGGCGAGTCTGCATTCGAAGTGACCTTTGATTGGGAAGAAGAAATCCGAGCTCCGGGAGCTTTCATTATCAGAAACAATCACGATAACGAGTTCTACCTGAAAACACTGACATTGGATCAAATCCCTAACCATGGCAGAATTCACTTCGTCTGCAACTCCTGGGTTTATCCTGCTGATAAGTACAAGAAGGATCGAATCTTCTTCTTCAACAGGACATGTCTTCCGACGGAGACGCCGGGACCCCTTATCAAATACAGAGAGGAAGAGCTGGTCAACCTCAGAGGAGATGGCCATGGAGAACTCAAAGAATGGGACCGGGTTTATGACTATGCTTACTACAATGATTTGGCTGATCCGGATAAGGGTCCGGAATATGACCGACCCGTCCTCGGCGGGTCTACTGAGTACCCGTACCCTCGCCGGGGAAGAACTGGACGGCCGCCGGCGAAAGCAGGCAAGTAG 741 47.91 MLHNLVESLTGSLGHEDGGKKIKGTVVLMKKNVLELNDFVASVQDRLEDLFGQKVSLQLISAVNGDPANGLRGKVGKASNLEDWATSKPRLKTGESAFEVTFDWEEEIRAPGAFIIRNNHDNEFYLKTLTLDQIPNHGRIHFVCNSWVYPADKYKKDRIFFFNRTCLPTETPGPLIKYREEELVNLRGDGHGELKEWDRVYDYAYYNDLADPDKGPEYDRPVLGGSTEYPYPRRGRTGRPPAKAGK 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4629515 4631178 + BLOR03379 Blo11g00503 66703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00503 246 Gene3D PLAT/LH2 domain 13 166 - -
Blo11g00503 246 PANTHER LIPOXYGENASE 15 244 IPR000907 GO:0016702|GO:0046872
Blo11g00503 246 CDD PLAT_LH2 20 163 IPR042057 -
Blo11g00503 246 Gene3D - 167 246 - -
Blo11g00503 246 MobiDBLite consensus disorder prediction 210 246 - -
Blo11g00503 246 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 165 246 IPR013819 GO:0016702|GO:0046872
Blo11g00503 246 Pfam PLAT/LH2 domain 61 161 IPR001024 GO:0005515
Blo11g00503 246 PRINTS Plant lipoxygenase signature 197 213 IPR001246 GO:0016491
Blo11g00503 246 PRINTS Plant lipoxygenase signature 132 150 IPR001246 GO:0016491
Blo11g00503 246 PRINTS Plant lipoxygenase signature 230 246 IPR001246 GO:0016491
Blo11g00503 246 PRINTS Plant lipoxygenase signature 158 179 IPR001246 GO:0016491
Blo11g00503 246 Pfam Lipoxygenase 175 244 IPR013819 GO:0016702|GO:0046872
Blo11g00503 246 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 15 244 - -
Blo11g00503 246 ProSiteProfiles PLAT domain profile. 34 162 IPR001024 GO:0005515
Blo11g00503 246 SMART LH2_4 20 163 IPR001024 GO:0005515
Blo11g00503 246 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 20 165 IPR036392 GO:0005515
Blo11g00503 246 SUPERFAMILY Lipoxigenase 167 243 IPR036226 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo11g00503 Blo18g00615 CCT
Blo11g00503 Blo18g00615 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00503 Blo-Chr11:4629515 Blo05g00038 Blo-Chr5:330490 1.23E-45 dispersed
Blo11g00503 Blo-Chr11:4629515 Blo18g00615 Blo-Chr18:10025681 2.11E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00503 K15718 - mnt:21384383 344.739