Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00524 ATGTCTACTTTTACCAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGTTGATAAATGTTGGGCAAAAGCAAGATGCATTACAAGCTCTTCATGATCTCATCACCTCCAAAAAATATCGAGCATGGCAAAAGCCACTTGAAAGGATTATGTTCAAATATGTGGAGCTTTGTGTGGACATGCGGAGAGGAAGGTTTGCTAAAGATGGTTTAATTCAATACCGAATAGTGTGTCAACAAGTCAATGTTTCTTCTTTAGAGGAGGTGATCAAGCACTTTATGCATCTATCCTCTGAGAAAGCTGAGCAGGCTCGCAGTCAGGCACAAGCACTCGAAGAAGCTCTTGATGTTGATGACTTGGAAGCAGATAAAAGGCCAGAAGATTTGATGCTAAGCTATGTCAGTGGAGAGAAAGGAAAGGATAGATCTGATCGTGAACTTGTGACTCCATGGTTCAAATTCTTATGGGAGACTTACAGGACAGTGCTCGAAATTCTACGAAACAACTCAAAATTGGAGGCACTTTATGCTATGACAGCTCATCGAGCCTTCCAGTTCTGCAAACAGTATAAAAGAGCAACAGAGTTTCGCAGACTATGTGAAATTATTCGGAATCATCTAGCAAATCTTAATAAATACAGGGACCAAAGAGATCGCCCTGACTTGTCAGCACCAGAGAGCTTGCAACTTTACCTTGACACGAGATTCGAACAGCTTAAAATTGCTACTGAACTCAAACTCTGGCAGGAAGCTTTTCGTTCGGTTGAGGATATCCATGGATTGATGTGCATCGTTAAGAAAACGCCAAAGTCCTCCTTGATGGTTGTTTATTATGCTAAACTTACTGAAATATTTTGGATTTCTTCTAGCCATCTTTATCATGCTTATGCATGGTTCAAGCTTTTCACTCTTCAAAAAAGTTTCAACAAAAATTTAAACCAGAAGGATCTTCAGTTGATAGCTTCATCTGTTGTTTTGGCTGCACTTTCTATTTCACCATATGATCGCACGCTTGGTGCTTCACACATTGAACTTGAGAATGAAAAAGAGCGCAACTTGCGAATGGCAAATCTTATAGGGTTCAATCTCGATCCTAAATATGACAGCAGGGAAGTGCTTTCACGGTCAAATCTTCTATCTGAACTGGTATCTAAAGGGGTGCTGAGTTGTGCAACTCAGGAAGTAAAAGATCTTTACCATCTCTTGGAGCACGAGTTTCTTCCTCTTGATCTCGCCGCAAAACTGCAGCCTCTGTTGACTAAAATTTCAAAGCTTGGGGGTAAGCTATCTTCAGCTTCATCTGTGCCAGAAGTGCAATTTTCGCAATATGTCAATGCCTTGGAGAAGCTTGCTACTTTGAGGGTGCTTCAGCAGGTGTCTCAAGTTTACCAGTCAATGAAAATTGAGAGTTTATCTCGGATGATCTCTTTCTTTGATTTCTCGGCTGTAGAGAAAATTGCTGTTGATGCTGTCAAACATAACTTTGTTGCTATGAAAGTGGATCACACAAGAGGCGTGGTGGTGTTTGGTAATGTGGGTTTTGAATCTGATGGAATTAGAGATCACTTGTCTACTTTTGCTGAACGCTTAAATAAAGCAAGGGCCATGATATATCCACCTGTTATGAAAGCATCAAAAACAGAACAAATGTTGTCTAGTTTGGCAGACGATGTGGAGAAGGAACACAAAAAGCTTCTTGCTCGAAAAACTGTTATTGAAAGAAGAAAAGAAGAACAGGAACGCCATCTTTTAGAAATGGAGCGTGAGGAGGAGTCGAAACGGCTTAAACTACAAAAGATTACTGAAGAGGCAGAGCAAAAGAGGCTTGCATCAGAGTATGAACAAAGGAAAAACCAAAGAATACTTAGGGAAATAGAGGAACGAGAACTTGAAGAAGCTCAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAGAAGAAGGGAAAGAAGCCGATTTTAGAAGGGGAAAAGGTGACAAAGCAAACCTTAATGGAACTAGCACTGAGTGAGCAGCTCAGGGAAAGGCAGGAAATGGAGAAGAAATTACAAAAATTGTCAAAAACAATGGATTATTTAGAGAGAGCAAAAAGAGAAGAAGCAGCGCCTTTGATTGAAGCTGCATTTCAGCAACGTATAGTGAAGGAGAGAGAGCTCCATGAACGGGAGCAGCAGCTTGAGGTTGAATTGAGCAAACAACGACATGAGGGGGACCTCAAGGAGAAGAATCGACTGATTCGGATGGTGGACAACAAGATGAATCATGAGGTGTATATGTGTTTTCCCATTGAAGTTATCAAAGTATTCCAGGAGAAAGTTATTAGTCGCAGGAAAGAAGAGTTTGACAGACGTAGAGCTGAAAGGGAGGAACAAATTCAGCAAATAATTGAATTAAAGAGACAGGAAAGGGATTCTAAAAGAAAGAAAATATTCTATGTGAGACGTGAAGAGGAGAGGCTCAGAAAACTGCGTGAAGAGGAGGAAGCTCAAAGGCGCGAACTGGCTGAGAAACAAAAAAGGGAGGAGGCTGAAAGGAAAGCAAAATTGGACGGTATGGCGGAAAGGCAGAGGCAAAGGGAGCGAGAAACTGAGGAAAAGGAAAGAATGAGGAAAGAATCTTTATTAGGGAAATCAAATGATGGGGCCAACAGGTCTTCTGAGACTTCTGCTTCTCTTCCTTTGGAATCTAGACCCATGGCACCGGCTGCAGCAGCAGCAGCAGCAGCTGCTGCCCCCTCAGCTGCCCCATCACCTGCAAAGTATGTGCTCAGGCACTTGCGCGAAAGAACAGAGAGCTCTGGAGAGGCTCCACCTCCTCCTTCCGATAGGTGGGGAAGGCAGGATGATCGTGCCTCTCAGCCGACTGACAGGTGGCGATCTAGTTCGCGACCATCTTGGTCCTCGTCCAGGATTCCACCTCGTGGTGGAACTGAGCGCTGA 2937 42.87 MSTFTKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFMHLSSEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRATEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELKLWQEAFRSVEDIHGLMCIVKKTPKSSLMVVYYAKLTEIFWISSSHLYHAYAWFKLFTLQKSFNKNLNQKDLQLIASSVVLAALSISPYDRTLGASHIELENEKERNLRMANLIGFNLDPKYDSREVLSRSNLLSELVSKGVLSCATQEVKDLYHLLEHEFLPLDLAAKLQPLLTKISKLGGKLSSASSVPEVQFSQYVNALEKLATLRVLQQVSQVYQSMKIESLSRMISFFDFSAVEKIAVDAVKHNFVAMKVDHTRGVVVFGNVGFESDGIRDHLSTFAERLNKARAMIYPPVMKASKTEQMLSSLADDVEKEHKKLLARKTVIERRKEEQERHLLEMEREEESKRLKLQKITEEAEQKRLASEYEQRKNQRILREIEERELEEAQALLQEAEKRVGKKKGKKPILEGEKVTKQTLMELALSEQLRERQEMEKKLQKLSKTMDYLERAKREEAAPLIEAAFQQRIVKERELHEREQQLEVELSKQRHEGDLKEKNRLIRMVDNKMNHEVYMCFPIEVIKVFQEKVISRRKEEFDRRRAEREEQIQQIIELKRQERDSKRKKIFYVRREEERLRKLREEEEAQRRELAEKQKREEAERKAKLDGMAERQRQRERETEEKERMRKESLLGKSNDGANRSSETSASLPLESRPMAPAAAAAAAAAAPSAAPSPAKYVLRHLRERTESSGEAPPPPSDRWGRQDDRASQPTDRWRSSSRPSWSSSRIPPRGGTER 978
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4852412 4858151 + BLOR03400 Blo11g00524 66724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00524 978 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 957 IPR027512 GO:0005852
Blo11g00524 978 Gene3D UVR domain 217 267 - -
Blo11g00524 978 MobiDBLite consensus disorder prediction 834 876 - -
Blo11g00524 978 Gene3D - 268 340 - -
Blo11g00524 978 Gene3D - 364 493 - -
Blo11g00524 978 Coils Coil 554 602 - -
Blo11g00524 978 Coils Coil 668 698 - -
Blo11g00524 978 MobiDBLite consensus disorder prediction 956 978 - -
Blo11g00524 978 Coils Coil 615 649 - -
Blo11g00524 978 Coils Coil 851 871 - -
Blo11g00524 978 MobiDBLite consensus disorder prediction 877 892 - -
Blo11g00524 978 SMART PINT_4 441 532 IPR000717 -
Blo11g00524 978 Coils Coil 787 807 - -
Blo11g00524 978 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Blo11g00524 978 Coils Coil 812 845 - -
Blo11g00524 978 Coils Coil 715 735 - -
Blo11g00524 978 MobiDBLite consensus disorder prediction 834 978 - -
Blo11g00524 978 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 929 - -
Blo11g00524 978 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Blo11g00524 978 Pfam PCI domain 373 509 IPR000717 -
Blo11g00524 978 Coils Coil 93 120 - -
Blo11g00524 978 MobiDBLite consensus disorder prediction 941 955 - -
Blo11g00524 978 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 929 IPR027512 GO:0005852
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo10g00377 Blo11g00524 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00377 Blo-Chr10:6270338 Blo11g00524 Blo-Chr11:4852412 1.11E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00524 K03254 - zju:107411812 1316.6