Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00538 ATGGTTTGCCAAGAAGAGCCTTTGGTACGCAAAATCTGCGAACTGTACGACCAAATCTCAAACCTAGAGAACCTCAAACCTTGCAAAAATGTCGACATACTCTTCACCCAGCTGGTGCTGACTTGCATGCAGCCAAGCCCTATTGATGTAGCCAAACTTTGCACGAGGGTTCAGCAAATCAGAGCCAAACTCATTCAGCTCTGCGCTGAGGCAGAGGGTCTTTTAGAAAGCCATTTCTCGACCATCTTAGCCTCTTTTAAAAACCCACTTCAAAATCTCGACCTTTTCCCTTATTATTCCAACTACCTCAAACTTAGCCTTCTTGAGTTCAATATTCTTACAGATCATTGCCAATACCCACCCTCCAAACTTGCTTTTATCGGTTCAGGATCACTTCCTCTCACCTCCATTGTTTTAGCCCTTAATCACCTCCCCTCCACCATTTTTCACAACTATGATATCGACCCATCAGCCAAGTCAAAGGCTTTCTCTTTGATTTCAACTCATCCTGATTTGTCAAAAAGAATGTTTTTTCACACTGCAGATATAATGAACGTTACCAATGCTTTGAAAGAGTATCAAGTCGTGTTTTTAGCTGCTTTAGTTGGTATGAACAAGGAAGAGAAAGCTAAAGTTATAGACCATTTGTGCAAGTATATGGCTCCTGGAGCTTATCTGATGGTTCGAAGCGCTCATGGAGCAAGGGCTTTTCTGTACCCAGTTGTTGATTTTGTTGATCTTCGAGGGTTTGAGATCCTGTCTGTGTTTCATCCAACTGATGAGGTTATAAATTCAGTCATTATGGGCAGGAAAAAGACGATATCTGTTGATCGATTTGATGATCAAGGGAATAAATCCATGGTAAGGCCTTGTAAGTGCTCTGAGATGCAGAGCTTCAATATCCCAAAAATGGAGGAATTAGCTATGGAGGAGCAGCTTTCTTAA 945 41.8 MVCQEEPLVRKICELYDQISNLENLKPCKNVDILFTQLVLTCMQPSPIDVAKLCTRVQQIRAKLIQLCAEAEGLLESHFSTILASFKNPLQNLDLFPYYSNYLKLSLLEFNILTDHCQYPPSKLAFIGSGSLPLTSIVLALNHLPSTIFHNYDIDPSAKSKAFSLISTHPDLSKRMFFHTADIMNVTNALKEYQVVFLAALVGMNKEEKAKVIDHLCKYMAPGAYLMVRSAHGARAFLYPVVDFVDLRGFEILSVFHPTDEVINSVIMGRKKTISVDRFDDQGNKSMVRPCKCSEMQSFNIPKMEELAMEEQLS 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5012512 5013456 + BLOR03414 Blo11g00538 66738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00538 314 Gene3D Vaccinia Virus protein VP39 7 272 IPR029063 -
Blo11g00538 314 PANTHER SYNTHASE, PUTATIVE-RELATED 1 313 - -
Blo11g00538 314 PANTHER NICOTIANAMINE SYNTHASE 3 1 313 IPR004298 GO:0030410|GO:0030418
Blo11g00538 314 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Blo11g00538 314 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Blo11g00538 314 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 253 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00479 Blo-Chr8:11176277 Blo11g00538 Blo-Chr11:5012512 1.50E-86 dispersed
Blo11g00538 Blo-Chr11:5012512 Blo14g00652 Blo-Chr14:13287744 5.93E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00538 K05953 - tcc:18600574 436.802