Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00546 ATGGCCAGTGGTGGGGGTGGAGCAGAAGCGTATGTGAAGGCCAAGACGTCTGTCTGGTGGGACATCGAGAATTGTCAGGTACCCAAGGGCTGCGACGTCCATAGCATTGCTCAGAATGTCAGCTCTGCCCTCGCTAACCTCAATTATTGCGGTCCCCTCTCTATCATTGCCTATGGGGATACCACTGGCATCCCTCACTCCATCCAGCAAGCGCTTTCCTCCACCGGAGTATCCCTCAACCACGTCCCTTCCGGTGTTAAAGATGCAAGTGACAAGAAAATTCTTGTAGACATGCTACTTTGGGCTGTGGACAATCCTGCTCCTGCTAACTATCTGTTGATATCTGGGGATCGAGATTTCTCTAATGCTCTTCATCAGTTGGCCATGAGGAGATACAATATCCTTCTAGCACAACCACTTAAAGCATCTGTGCCTCTCCTCAAAGCTGCCAGGATCGTATGGCTATGGACCAGTCTTGTCGCCGGAGGACCACCTCAAACAAACACTGAACTACAACAACTTATGAATAATTGCTTAGCCTCAACTTCTGATACCTCTCCCACTCCACCCAGTCCAATCGCCATTGCCTCTCAAATTCATCAACCAATGGGTTCTCCCCATTTTCAAGACCTTAAAACAGGAAAACAAGCTCCTAAATTAAAGGGGAAAGTACCTAGGAGAAACTTTAGTCAGCCAAATGTATTGAAACCAACAGTTTTTCCGATCAAGAGTCAAGATGATCGAGGTGCTGTCAATCCTCGCCAACATGTTAATTCATATTCGAATGCCCCCTCTAAGAGTCAGCCAAAAATACATTTTCACCGCTCCAATCCTGATCTTTCGAGGAGCAACATCAATAATTCTCAGAGTAGCTATCAGAATTCATCCCCCCATTCTATAAGCCCTGACATCCATTCACTACAATCTGCAAACTCACCTTCAAATACGAACCACCCATCAAATCTTCACTCCAATTTTTCTCCAATGCCTGCTAAACCAGGCTTCTCATCAGGTTTTGCTACAAGTGCACCTGATTTTAGTAGTTTGAATATTTCGGGTTCTTTTAGCAGTACCCATCATGACCGTGTTGTTCGACCACAGAATGGAGAACAATTACACAATTTTCTAAACAACTTGCCAAGTTCTATGAACTCAAGTGAATCAAAGAAGGGGATCCCAGTCCAGGCGTCATATTCTGACGACAATTGGAACACTTTGGAGTTTTCATCCACGTCAGCTGAAGCAAGTTCATCTAGCTTGTCAACTAATATCCATTGGGGATCTCTAGGCTGTCCAAAACCTTCTGAGAATGTACAAGGGCATATAGGCATTATCTTATGTGCCTTGAACACACTGAAAAACGAAAAGATAATGCCAACTGAAGCAAACATAACTGATTGCATAATGTTTGGAGAACCCAAACAACATCAGATTGATATAAATAAGGCGCTGAAAAGTGCCATTGAGCATCAAATGGTTGTGATGCAGAATGTAGGTGCACTGCAGTTGTATATCGGTAAGAACGACATACTATGGAAATGTGTAAACCCATTGGGTGGAAACACTAATCAGTTTTCCCCAGATATGTGGAATAGAATCCAACAATTTTTAACATCACCTCCTGGTCGAACTGCTATAATGGTTTCACAGTGCAGTAGGTATGAAGCAGGCACAATATTGAAGAGCATGTGCTTGAAAGAGATTGTTTTGGGTGAAGTACTTCAGATTCTGAATATGGTAATAACTGTGAAGAAGTGGATTGTCCATCATCACTCAGGATGGCAACCACTCAAAATTGTTCTTGCTTAG 1809 43.45 MASGGGGAEAYVKAKTSVWWDIENCQVPKGCDVHSIAQNVSSALANLNYCGPLSIIAYGDTTGIPHSIQQALSSTGVSLNHVPSGVKDASDKKILVDMLLWAVDNPAPANYLLISGDRDFSNALHQLAMRRYNILLAQPLKASVPLLKAARIVWLWTSLVAGGPPQTNTELQQLMNNCLASTSDTSPTPPSPIAIASQIHQPMGSPHFQDLKTGKQAPKLKGKVPRRNFSQPNVLKPTVFPIKSQDDRGAVNPRQHVNSYSNAPSKSQPKIHFHRSNPDLSRSNINNSQSSYQNSSPHSISPDIHSLQSANSPSNTNHPSNLHSNFSPMPAKPGFSSGFATSAPDFSSLNISGSFSSTHHDRVVRPQNGEQLHNFLNNLPSSMNSSESKKGIPVQASYSDDNWNTLEFSSTSAEASSSSLSTNIHWGSLGCPKPSENVQGHIGIILCALNTLKNEKIMPTEANITDCIMFGEPKQHQIDINKALKSAIEHQMVVMQNVGALQLYIGKNDILWKCVNPLGGNTNQFSPDMWNRIQQFLTSPPGRTAIMVSQCSRYEAGTILKSMCLKEIVLGEVLQILNMVITVKKWIVHHHSGWQPLKIVLA 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5103437 5105667 + BLOR03422 Blo11g00546 66746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00546 602 MobiDBLite consensus disorder prediction 278 329 - -
Blo11g00546 602 MobiDBLite consensus disorder prediction 204 329 - -
Blo11g00546 602 MobiDBLite consensus disorder prediction 373 392 - -
Blo11g00546 602 Pfam NYN domain 15 150 IPR021139 GO:0004540
Blo11g00546 602 Coils Coil 600 602 - -
Blo11g00546 602 CDD PIN_limkain_b1_N_like 15 139 - -
Blo11g00546 602 Gene3D - 10 158 - -
Blo11g00546 602 PANTHER LIMKAIN B LKAP 3 594 IPR024768 GO:0005777|GO:0010468|GO:1903231
Blo11g00546 602 MobiDBLite consensus disorder prediction 251 271 - -
Blo11g00546 602 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 3 594 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00546 Blo-Chr11:5103437 Blo16g00517 Blo-Chr16:21049055 5.68E-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00546 - - rcu:8274957 580.482