Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00552 ATGGGTTGCTTTTCTTCTCTCTCCTTCCTCAAATGGCAATTTTTTCACAAACCCTTGTCGCCAAAACTTGTTCTGAACCTCTTCTTGTTTTTCTCTGTCTGCTCAATCTCTCTTAATGGTGTTGCCCTGTCCGACTCGGATAAATCAGTGCTTCTTCTGTTCAAGAATTCGGTTCGTGACCCGTCTGGATTGCTTTCGAGCTGGAGCTCTATGAGTTCCGATCATTGTTCTTGGTTCGGCATCTCCTGCGACTCCAACTCTCGTGTGGTGTCACTCAACATTTCTGGTAATGGCAGTGGAGGTAACTCCGTTGCTTTTTCGTGCTCTGATTTTTCTAAATTTCCGCTATATGGGTTAGGAATTCGAAGGAATTGTGGGGATAATGAAGGAATATTGGTTGGGAAACTAACGCCATTGCTTGGGAAGCTGAGTGCGCTTAAGATTTTGTCGCTGCCCTTTAATAGTTTTGAAGGTGAAGTACCTGATGAAATATGGGGAATAAAGAGCTTAGAGGTTCTTGATCTAGAAGGAAATTTGATAACTGGGTTACTCCCGAATCATCTTACAGGTCTGAACAATCTACGGGTTCTTAATCTCGCCTTTAATAAAATCGAGGGTAATATACCTAGCTGGCTCGCGTATTCTCCGCATTTAGAGACCTTAAATTTAGCTGGGAATCAATTGAATGGAACCATTCCGGGCTGGATTGGTCGTTTGAGGGGAGCTTATTTGTCATTCAATTGGTTGACTGGGTCCATTCCTGTTGAATTGGGAGGAAGTTGTGGTAAGCTAGAGCATCTAGATTTGTCAGGTAATTACTTAATCCATGAAATTCCTAGAAGTTTGGGAAATTGCAGTCAGTTAAAGACTCTATTGCTGTATTCAAATATGTTGGAAGAGAGTATACCATCCGAACTTGGACAGCTTCAGAAGCTCGAGGTGTTTGATGTTTCGAGGAACAGCCTCAGTGGTGCAATACCCCATGAGCTGGGAAATTGTTTTGAATTGTCTGTTCTTGTACTTTCCAATCTGTTTGATCCGCTACCTCCAATCAAAAACACTGATGGGAACCCTCCCTTAGGGGAAGTGAGTACTGATGACTTTAATTTCTTTCAAGGCACAATGCCTATGAAAATCGCAAGGCTTCCAAAACTAAGGATTCTGTGGGCACCAAGGGCCAGTCTGGAGGGTAAGTTTCCAAGCAATTGGGGTACTTGCGAAAATTTACAGATGATGAGCTTGGCTCAAAATCTATTCTCTGGAGAATTTCCCAGAGGCCTTAGTCTTTGCAAGAATTTACAATTTCTTGACTTAAGCAGTAACAAGCTTTTTGGGGAACTTGACGAGGAACTTTCTGTACCTTGCATGGCTGTGTTTGATATCAGTGACAACCATTTGTCAGGTCTGATTCCTAAATTTGGTACGATTTCATGCCTTCCCGTCACTGCTTATGAACCGTACAATCCATCGGCTATGTATATTTCATTTTTTGAGACTAAAGTTCGAGAGGCCGTCCCGTATCATTTTGTTAAACATGATGATTTCGTGGTTTTTCATAACTTTGGGCACAATAATTTCACGCGTGGTTTCCAGTCTATGCCTATTGCGCCTGAAAGATTAGGAGTACGGACTGTTTATGCATATCTTGCTGGAGAAAACAAGCTTACTGGACCTTTTCCTGGCAACTTATTTGAAAATTGTCGAGGATTGGGGGCATTGATTGTTAATGTTAGCTATAACAGAATATCTGGTCAGATTCCCAGTCATATTGGTCAAATGTGTAGTTCTTTAAAATATTTTGATGCATCTGGTAATCAAATTAGTGGACCCATCAGCAGTAGTTTTGGTGATTTGGTGTCTCTAGATGATCTCAACTTGAGCCGGAACCTGTTAGAAGGTCACATTCCGGCCAGTCTTGGTCAGATAAAATATCTGAGATATCTTTCTTTGGCTAATAATCGCTTGAATGGCTCCATTCCTTCCAGCTTGGGGCGATTGCAGTCCTTAGAACTGCTAGATCTTTCTTCAAATTATATCAGTGATGTTATTCCCAAAGATTTAGTAAACTTGAAGAATCTGACCGTTCTTCTGCTCAATAATAATAATTTATCTGGGCAGATTCCTTCCGAGCTGGCATATGTGACCACACTCTCTGTTTTCAATGTATCATTCAATAATTTGTCTGGGTCCCTGCCTTTGAAGAACTTCATGAAATGTAATTCTGCTCTTGGGAATCCTAGTATTATTACGTGTCCTATGTCTAATCTATTGGTGCCATCATCCAATACGCAAGGAAGAGTTGGAGTTGCAAGTAATTATGAAGCTTCACCTCCTGGGACTGTAACCCAGACAAGTGGAGGTAATGGCTTTAATTCGATTGAGATTGCTTCCATAACTTCTGCATCGGCCATTGTCTCGGTTCTTCTAGCTTTGATCGTCCTTTTCATATATACCCGAAAGTGGAATCCCAAATCTAAAGTCCTCGCTGTCACTAGAAAGGAAGTAACTGTTTTCACAGACATTGGGACTCCTCTGAACTTTGACAACGTCGTGAGAGCGACAGGAAACTTTAATGCGAGTAATTGCATTGGCAATGGAGGTTTTGGGGCAACTTACAAAGCAGAGATTTCAGCCGGAGTTTTAGTGGCCATAAAACGGCTTTCTGTGGGACGGTTTCAGGGAGTTCAACAGTTCCATGCAGAAGTCAAGACTCTCGGGAGGCTTCGCCATCCAAATCTTGTCACTTTAATTGGCTATCATGCCAGCGAGACAGAGATGTTTCTGATATACAATTACTTGCCAGGTGGTAATTTGGAGAAATTTATTCACGAGAGGTCGACAAGGGCTGTTGATTGGGGAATTCTTCACAAAATTGCACTGGACATTGCCCGTGCACTTGCCTACCTTCACGATCAATGCGTGCCACGTGTTCTTCATCGAGATGTCAAGCCAAGCAATATCTTATTAGATGATGATCTCAATGCATATCTATCTGATTTTGGATTGGCGCGTCTTTTGGGTACTTCTGAAACACACGCTACTACAGGTGTGGCCGGAACTTTTGGGTACGTTGCTCCAGAATATGCTATGACTTGTCGTGTTTCGGACAAGGCTGATGTGTATAGTTATGGGGTGGTACTACTAGAATTGCTCTCTGACAAGAAAGCTTTGGACCCTTCGTTTTCCTCTTATGGAAATGGCTTCAACATAGTTGCATGGGCGTGTATGCTTTTAAGACAAGGCCGTGCAAAGGAGTTCTTCACTGCCGGATTATGGGACGTTGGCCCACACGATGATTTGGTTGAAGTATTACACTTGGCTGTGATTTGTACGGTTGATTCTCTCTCTACGAGGCCGACAATGAAGCAAGTTGTCCGACGGCTCAAGCAGCTTCAACCACCCTCGAGTTAG 3411 42.6 MGCFSSLSFLKWQFFHKPLSPKLVLNLFLFFSVCSISLNGVALSDSDKSVLLLFKNSVRDPSGLLSSWSSMSSDHCSWFGISCDSNSRVVSLNISGNGSGGNSVAFSCSDFSKFPLYGLGIRRNCGDNEGILVGKLTPLLGKLSALKILSLPFNSFEGEVPDEIWGIKSLEVLDLEGNLITGLLPNHLTGLNNLRVLNLAFNKIEGNIPSWLAYSPHLETLNLAGNQLNGTIPGWIGRLRGAYLSFNWLTGSIPVELGGSCGKLEHLDLSGNYLIHEIPRSLGNCSQLKTLLLYSNMLEESIPSELGQLQKLEVFDVSRNSLSGAIPHELGNCFELSVLVLSNLFDPLPPIKNTDGNPPLGEVSTDDFNFFQGTMPMKIARLPKLRILWAPRASLEGKFPSNWGTCENLQMMSLAQNLFSGEFPRGLSLCKNLQFLDLSSNKLFGELDEELSVPCMAVFDISDNHLSGLIPKFGTISCLPVTAYEPYNPSAMYISFFETKVREAVPYHFVKHDDFVVFHNFGHNNFTRGFQSMPIAPERLGVRTVYAYLAGENKLTGPFPGNLFENCRGLGALIVNVSYNRISGQIPSHIGQMCSSLKYFDASGNQISGPISSSFGDLVSLDDLNLSRNLLEGHIPASLGQIKYLRYLSLANNRLNGSIPSSLGRLQSLELLDLSSNYISDVIPKDLVNLKNLTVLLLNNNNLSGQIPSELAYVTTLSVFNVSFNNLSGSLPLKNFMKCNSALGNPSIITCPMSNLLVPSSNTQGRVGVASNYEASPPGTVTQTSGGNGFNSIEIASITSASAIVSVLLALIVLFIYTRKWNPKSKVLAVTRKEVTVFTDIGTPLNFDNVVRATGNFNASNCIGNGGFGATYKAEISAGVLVAIKRLSVGRFQGVQQFHAEVKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIHERSTRAVDWGILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDLNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGRAKEFFTAGLWDVGPHDDLVEVLHLAVICTVDSLSTRPTMKQVVRRLKQLQPPSS 1136
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5190396 5193806 - BLOR03428 Blo11g00552 66752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00552 1136 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 25 1135 - -
Blo11g00552 1136 Gene3D Ribonuclease Inhibitor 241 351 IPR032675 -
Blo11g00552 1136 Gene3D Ribonuclease Inhibitor 366 532 IPR032675 -
Blo11g00552 1136 SUPERFAMILY Protein kinase-like (PK-like) 840 1128 IPR011009 -
Blo11g00552 1136 ProSiteProfiles Protein kinase domain profile. 857 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00552 1136 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 25 1135 - -
Blo11g00552 1136 Gene3D Phosphorylase Kinase; domain 1 820 932 - -
Blo11g00552 1136 ProSiteProfiles Leucine-rich repeat profile. 668 691 IPR001611 GO:0005515
Blo11g00552 1136 Gene3D Transferase(Phosphotransferase) domain 1 933 1133 - -
Blo11g00552 1136 ProSitePatterns Protein kinases ATP-binding region signature. 863 885 IPR017441 GO:0005524
Blo11g00552 1136 ProSitePatterns Serine/Threonine protein kinases active-site signature. 977 989 IPR008271 GO:0004672|GO:0006468
Blo11g00552 1136 SMART LRR_typ_2 216 239 IPR003591 -
Blo11g00552 1136 SMART LRR_typ_2 690 714 IPR003591 -
Blo11g00552 1136 SMART LRR_typ_2 191 215 IPR003591 -
Blo11g00552 1136 SMART LRR_typ_2 261 285 IPR003591 -
Blo11g00552 1136 SMART LRR_typ_2 309 333 IPR003591 -
Blo11g00552 1136 SMART LRR_typ_2 618 642 IPR003591 -
Blo11g00552 1136 SMART LRR_typ_2 167 190 IPR003591 -
Blo11g00552 1136 SMART LRR_typ_2 666 689 IPR003591 -
Blo11g00552 1136 Gene3D Ribonuclease Inhibitor 43 240 IPR032675 -
Blo11g00552 1136 SMART serkin_6 857 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00552 1136 Pfam Protein kinase domain 860 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo11g00552 1136 SUPERFAMILY L domain-like 45 344 - -
Blo11g00552 1136 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Blo11g00552 1136 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Blo11g00552 1136 Pfam Leucine rich repeat 644 703 IPR001611 GO:0005515
Blo11g00552 1136 Pfam Leucine Rich Repeat 263 285 IPR001611 GO:0005515
Blo11g00552 1136 Gene3D Ribonuclease Inhibitor 547 634 IPR032675 -
Blo11g00552 1136 Gene3D Ribonuclease Inhibitor 635 755 IPR032675 -
Blo11g00552 1136 CDD STKc_IRAK 863 1131 - -
Blo11g00552 1136 SUPERFAMILY L domain-like 372 739 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00552 Blo-Chr11:5190396 Blo01g00315 Blo-Chr1:3848579 1.79E-140 dispersed
Blo01g00454 Blo-Chr1:5026821 Blo11g00552 Blo-Chr11:5190396 0 wgd
Blo10g00156 Blo-Chr10:1816917 Blo11g00552 Blo-Chr11:5190396 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84538 PF00069 Pkinase 4.80E-43 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00552 - - zju:107415929 1548.1